LOCUS       NM_001402524            1442 bp    mRNA    linear   PLN 01-JAN-2023
DEFINITION  Oryza sativa Japonica Group fructose-bisphosphate aldolase 1,
            cytoplasmic-like (FBA1), mRNA.
ACCESSION   NM_001402524 XM_015783766
VERSION     NM_001402524.1
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1442)
  AUTHORS   Zhang F, Zhang P, Zhang Y, Wang S, Qu L, Liu X and Luo J.
  TITLE     Identification of a peroxisomal-targeted aldolase involved in
            chlorophyll biosynthesis and sugar metabolism in rice
  JOURNAL   Plant Sci 250, 205-215 (2016)
   PUBMED   27457997
  REMARK    GeneRIF: OsAld-Y participates in Chl accumulation, chloroplast
            development and plant growth by influencing the photosynthetic rate
            of leaves and the sugar metabolism of rice.
REFERENCE   2  (bases 1 to 1442)
  AUTHORS   Jantasuriyarat C, Gowda M, Haller K, Hatfield J, Lu G, Stahlberg E,
            Zhou B, Li H, Kim H, Yu Y, Dean RA, Wing RA, Soderlund C and Wang
            GL.
  TITLE     Large-scale identification of expressed sequence tags involved in
            rice and rice blast fungus interaction
  JOURNAL   Plant Physiol 138 (1), 105-115 (2005)
   PUBMED   15888683
REFERENCE   3  (bases 1 to 1442)
  AUTHORS   Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N,
            Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki
            T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T,
            Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y,
            Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu
            M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda
            R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M,
            Ryu R, Ueda M, Matsubara K, Kawai J, Carninci P, Adachi J, Aizawa
            K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K,
            Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N,
            Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki
            T, Yoshino M, Hayashizaki Y and Yasunishi A.
  CONSRTM   Rice Full-Length cDNA Consortium; National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team;
            Foundation of Advancement of International Science Genome
            Sequencing & Analysis Group; RIKEN
  TITLE     Collection, mapping, and annotation of over 28,000 cDNA clones from
            japonica rice
  JOURNAL   Science 301 (5631), 376-379 (2003)
   PUBMED   12869764
  REMARK    Erratum:[Science. 2003 Sep;301(5641):1849]
REFERENCE   4  (bases 1 to 1442)
  AUTHORS   Hidaka S, Kadowaki K, Tsutsumi K and Ishikawa K.
  TITLE     Nucleotide sequence of the rice cytoplasmic aldolase cDNA
  JOURNAL   Nucleic Acids Res 18 (13), 3991 (1990)
   PUBMED   2374721
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CB654894.1, CB654895.1 and CI440940.1.
            
            On Mar 17, 2022 this sequence version replaced XM_015783766.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB654894.1, GQ848038.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00008650, SAMD00020310
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-781               CB654894.1         1-781
            782-1089            CB654895.1         397-704             c
            1090-1442           CI440940.1         71-423
FEATURES             Location/Qualifiers
     source          1..1442
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="5"
                     /map="5"
     gene            1..1442
                     /gene="FBA1"
                     /gene_synonym="cALD; FBA"
                     /note="fructose-bisphosphate aldolase 1, cytoplasmic-like"
                     /db_xref="GeneID:4338737"
     exon            1..213
                     /gene="FBA1"
                     /gene_synonym="cALD; FBA"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    153..155
                     /gene="FBA1"
                     /gene_synonym="cALD; FBA"
                     /note="upstream in-frame stop codon"
     CDS             186..1262
                     /gene="FBA1"
                     /gene_synonym="cALD; FBA"
                     /EC_number="4.1.2.13"
                     /note="fructose 1,6-bisphosphate aldolase;
                     Gravity-specific protein GSC 233; LOC_Os05g33380;
                     OSJNBa0035J16.18; OSJNBb0006J12.6; fructose-bisphosphate
                     aldolase cytoplasmic isozyme; cytoplasmic aldolase"
                     /codon_start=1
                     /product="fructose-bisphosphate aldolase 1, cytoplasmic"
                     /protein_id="NP_001389453.1"
                     /db_xref="GeneID:4338737"
                     /translation="

MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFCTPGALQYLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTIEVAGTEKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLAIDLNAQGLARYAIICQENGLVPIVEPEILVDGPHDIDRCAYVSEVVLAACYKALNEHHVLLEGTLLKPNMVTPGSDAKKVSPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY"

     misc_feature    186..1259
                     /gene="FBA1"
                     /gene_synonym="cALD; FBA"
                     /note="fructose-bisphosphate aldolase; Region: PLN02455"
                     /db_xref="CDD:178074"
     misc_feature    order(273..281,288..290,492..494,609..611,615..617,
                     732..734,858..860,978..986,1068..1070,1074..1079)
                     /gene="FBA1"
                     /gene_synonym="cALD; FBA"
                     /note="active site"
                     /db_xref="CDD:188635"
     misc_feature    order(501..503,654..656,663..668,675..677,687..689,
                     696..698,780..782,792..794,801..803,822..827,831..833,
                     843..845,939..944,948..950)
                     /gene="FBA1"
                     /gene_synonym="cALD; FBA"
                     /note="intersubunit interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:188635"
     misc_feature    858..860
                     /gene="FBA1"
                     /gene_synonym="cALD; FBA"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:188635"
     misc_feature    1257..1259
                     /gene="FBA1"
                     /gene_synonym="cALD; FBA"
                     /note="Necessary for preference for fructose
                     1,6-bisphosphate over fructose 1-phosphate.
                     /evidence=ECO:0000250|UniProtKB:P00883; propagated from
                     UniProtKB/Swiss-Prot (P17784.2); other site"
     exon            214..1442
                     /gene="FBA1"
                     /gene_synonym="cALD; FBA"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

ccctcctacaaggcggccggacgcccacagatcggatcgggtcatcaactcatcatcgccccccttcaaaaggccacccccctccccctcccttctcgcctcattccccacagccgccgcctccttcctctcctcgatctccctattcgtcgtagcctcctccctcgttcgctccgcccgcaaccatgtcggcctactgcggcaagtacaaggacgagctcatcaagaacgctgcctacattggcactcctggcaagggtatccttgctgcggatgagtccactggcaccattggcaagcgcttcgccagcatcaacgtcgagaacgttgaggagaaccgccgctccctccgcgagctcctcttctgcacccctggcgccctccagtacctcagcggcgtgatcctcttcgaggagaccctgtaccagaagaccaaggatggcaagcccttcgtcgatgtcctcaaggagggtggtgtcctcccgggcatcaaggtggacaagggcacaatcgaggttgccggcaccgagaaggagaccaccacccagggccatgatgaccttggcaagagatgcgccaagtactacgaggctggtgcccgcttcgccaagtggcgcgccgtcctcaagatcggccccaacgagccgtcgcagctcgccattgatctgaatgcgcagggcctcgctcgctacgccatcatctgccaggagaacgggctggtgccgatcgtcgagcccgagatccttgttgatggccctcacgacatcgaccgctgcgcctacgtctcggaggtggtcctcgctgcgtgctacaaggccctcaacgagcaccatgtcctcctcgagggtaccctcctcaagcccaacatggtcaccccaggctctgacgccaagaaggtgtctcccgaggtcatcgctgagtacaccgtccgcaccctccagaggaccgtccccgctgccgtgcccgccatcgtcttcctgtccggtgggcagagcgaggaggaggcgaccctgaacctcaacgccatgaacaagctcagcaccaagaagccgtggtcgctgtccttctccttcggccgtgccctccagcagagcacgctcaaggcctggtccggcaaggcggagaacattgagaaggccagggcggccttccttaccaggtgcaaggccaactccgaggctaccctcggtacatacaagggtgacgctgtcctcggcgagggcgcctccgagagccttcacgtcaaggactacaagtactgatttgccttgggaggtgctggctaccattggaacattctgcggctgttgcttaatgtggttttgatatctagagggcaatctatggttatctaaaatgtcttgtcgtaataattctggaacctttttgtgtaacacattaccaaatatcaattgcctggattgaaatatcgtttttatcag

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