LOCUS       NM_001402185            1565 bp    mRNA    linear   PLN 31-DEC-2022
DEFINITION  Oryza sativa Japonica Group UDP-arabinopyranose mutase 1-like
            (LOC4333393), mRNA.
ACCESSION   NM_001402185 XM_015775840
VERSION     NM_001402185.1
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Jantasuriyarat C, Gowda M, Haller K, Hatfield J, Lu G, Stahlberg E,
            Zhou B, Li H, Kim H, Yu Y, Dean RA, Wing RA, Soderlund C and Wang
            GL.
  TITLE     Large-scale identification of expressed sequence tags involved in
            rice and rice blast fungus interaction
  JOURNAL   Plant Physiol 138 (1), 105-115 (2005)
   PUBMED   15888683
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N,
            Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki
            T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T,
            Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y,
            Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu
            M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda
            R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M,
            Ryu R, Ueda M, Matsubara K, Kawai J, Carninci P, Adachi J, Aizawa
            K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K,
            Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N,
            Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki
            T, Yoshino M, Hayashizaki Y and Yasunishi A.
  CONSRTM   Rice Full-Length cDNA Consortium; National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team;
            Foundation of Advancement of International Science Genome
            Sequencing & Analysis Group; RIKEN
  TITLE     Collection, mapping, and annotation of over 28,000 cDNA clones from
            japonica rice
  JOURNAL   Science 301 (5631), 376-379 (2003)
   PUBMED   12869764
  REMARK    Erratum:[Science. 2003 Sep;301(5641):1849]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CI745105.1, CB658922.1, CB663397.1 and AU097119.1.
            
            On Mar 8, 2022 this sequence version replaced XM_015775840.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK061813.1, AK098933.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00008650, SAMD00020310
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-376               CI745105.1         2-377
            377-628             CB658922.1         351-602
            629-1253            CB663397.1         160-784             c
            1254-1565           AU097119.1         147-458
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="3"
                     /map="3"
     gene            1..1565
                     /gene="LOC4333393"
                     /gene_synonym="OJ1523_A02.1; OsJ_11657; OsUAM1; RGP1;
                     UAM1"
                     /note="UDP-arabinopyranose mutase 1-like"
                     /db_xref="GeneID:4333393"
     exon            1..440
                     /gene="LOC4333393"
                     /gene_synonym="OJ1523_A02.1; OsJ_11657; OsUAM1; RGP1;
                     UAM1"
                     /inference="alignment:Splign:2.1.0"
     CDS             99..1193
                     /gene="LOC4333393"
                     /gene_synonym="OJ1523_A02.1; OsJ_11657; OsUAM1; RGP1;
                     UAM1"
                     /EC_number="5.4.99.30"
                     /note="alpha-1,4-glucan protein synthase; LOC_Os03g40270;
                     Reversibly glycosylated polypeptide 1; UDP-L-arabinose
                     mutase 1"
                     /codon_start=1
                     /product="uDP-arabinopyranose mutase 1"
                     /protein_id="NP_001389114.1"
                     /db_xref="GeneID:4333393"
                     /translation="

MAGTVTVPSASVPSTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIRVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYVFTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAKTAVSHGLWLNIPDYDAPTQMVKPRERNSRYVDAVMTVPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCMKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNATIPKECDTVQKCYLSLAEQVREKLGKIDPYFVKLADAMVTWIEAWDELNPSTAAVENGKAK"

     misc_feature    126..1163
                     /gene="LOC4333393"
                     /gene_synonym="OJ1523_A02.1; OsJ_11657; OsUAM1; RGP1;
                     UAM1"
                     /note="reversibly glycosylated polypeptide; Provisional;
                     Region: PLN03180"
                     /db_xref="CDD:215615"
     misc_feature    426..434
                     /gene="LOC4333393"
                     /gene_synonym="OJ1523_A02.1; OsJ_11657; OsUAM1; RGP1;
                     UAM1"
                     /note="propagated from UniProtKB/Swiss-Prot (Q8H8T0.1);
                     Region: DXD motif. /evidence=ECO:0000269|PubMed:20149347"
     misc_feature    570..572
                     /gene="LOC4333393"
                     /gene_synonym="OJ1523_A02.1; OsJ_11657; OsUAM1; RGP1;
                     UAM1"
                     /note="N-linked (Glc...) arginine.
                     /evidence=ECO:0000269|PubMed:20149347; propagated from
                     UniProtKB/Swiss-Prot (Q8H8T0.1); glycosylation site"
     misc_feature    570..572
                     /gene="LOC4333393"
                     /gene_synonym="OJ1523_A02.1; OsJ_11657; OsUAM1; RGP1;
                     UAM1"
                     /note="Required for activity.
                     /evidence=ECO:0000269|PubMed:20149347; propagated from
                     UniProtKB/Swiss-Prot (Q8H8T0.1); other site"
     misc_feature    591..593
                     /gene="LOC4333393"
                     /gene_synonym="OJ1523_A02.1; OsJ_11657; OsUAM1; RGP1;
                     UAM1"
                     /note="Required for activity.
                     /evidence=ECO:0000269|PubMed:20149347; propagated from
                     UniProtKB/Swiss-Prot (Q8H8T0.1); other site"
     exon            441..691
                     /gene="LOC4333393"
                     /gene_synonym="OJ1523_A02.1; OsJ_11657; OsUAM1; RGP1;
                     UAM1"
                     /inference="alignment:Splign:2.1.0"
     exon            692..860
                     /gene="LOC4333393"
                     /gene_synonym="OJ1523_A02.1; OsJ_11657; OsUAM1; RGP1;
                     UAM1"
                     /inference="alignment:Splign:2.1.0"
     exon            861..1552
                     /gene="LOC4333393"
                     /gene_synonym="OJ1523_A02.1; OsJ_11657; OsUAM1; RGP1;
                     UAM1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

aaacccacacacacctcacacctcaccaccatcacctcctcctcctcctcctcttcctccgcgcgcgcgagatccagggagagggagagggagagatcatggcggggacggtgacggtgccgtcggcgtcggtgccgtcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctggacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgacccgaccaagaccatccgcgtccccgagggcttcgactacgagctctacaaccgcaacgacatcaaccggatcctcggccccaaggcctcctgcatctccttcaaggactccgcatgccgctgcttcggctacatggtctccaagaagaagtacgtcttcaccatcgacgacgactgcttcgttgccaaggacccatctggcaaggacatcaatgctcttgagcagcacatcaagaacctcctcagcccgtccaccccgttcttcttcaacaccttgtatgatccctaccgcgaaggcgctgactttgtccgtggttaccccttcagcctcagggagggagccaagactgctgtctctcacggcctgtggcttaacatccctgactatgatgctcctactcagatggtcaagcctcgtgagaggaactccaggtatgttgatgctgtcatgactgtgcccaagggaaccttgttccccatgtgtggcatgaaccttgcttttgaccgtgatctcatcggtcctgcaatgtactttggtctcatgggtgatggccagcctattggtcgctacgacgacatgtgggctggatggtgcatgaaggtcatctgtgaccacctgagcctgggagtgaagactggactgccgtacatctggcacagcaaggctagcaaccccttcgtgaacttgaagaaggaatacaagggcatcttctggcaggaggacatcatccccttcttccagaacgccaccatccccaaggagtgcgacaccgtccagaagtgctacctctccctcgccgagcaggtcagggagaagctcggcaagatcgacccctacttcgtcaagcttgccgatgccatggtcacctggatcgaggcctgggatgagctgaacccctcgactgctgctgtcgagaacggcaaggccaagtagattgatcctgggagcttgtgtgtcgcaggatggaaagtaccctttaagtgaaagtgttgctgtggcctaggccccctagatatagctctttttgagatgaagggagagattacttaagcaactttataattctttgttgttatgctggttcttttgtagctggaaaaggatttgttatcatcgtttacataattcaagacaataataattttatcatgtaattttgatagtcgtgctttggttgctaaatggtgttattgtatttaataacctttgcaaatcactatacctgttggttgttctgagaattgtatgcactaccatattatatttctaaatcatttcgtaggcattatggaaaaaaaaaaaaaa

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