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2024-03-28 21:45:20, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Oryza sativa Japonica Group protein argonaute 17-like (LOC4328436), mRNA. (3003 bp)
LOC4328436" /gene_synonym="AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545" /note="protein argonaute 17-like" /db_xref="GeneID:4328436" exon 1..142 /gene="LOC4328436" /gene_synonym="AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545" /inference="alignment:Splign:2.1.0" exon 143..390 /gene="LOC4328436" /gene_synonym="AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545" /inference="alignment:Splign:2.1.0" CDS 178..2808 /gene="LOC4328436" /gene_synonym="AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545" /note="putative leaf development protein Argonaute; P0669G09.26; LOC_Os02g07310" /codon_start=1 /product="protein argonaute 17" /...
Synonym: AGO17; OJ1116_A06.3; OsAGO17; OsJ_05545
NM_001409344.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 7-like (LOC4333232), mRNA. (3860 bp)
Swiss-Prot (Q75HC2.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 1132..1398 /gene="LOC4333232" /gene_synonym="AGO7; OsAGO7; SHL4; SHO2; SHOOTLESS4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 1429..1578 /gene="LOC4333232" /gene_synonym="AGO7; OsAGO7; SHL4; SHO2; SHOOTLESS4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 1591..1929 /gene="LOC4333232" /gene_synonym="AGO7; OsAGO7; SHL4; SHO2; SHOOTLESS4" /note="PAZ domain, argonaute_like subfamily. Argonaute is...
Synonym: AGO7; OsAGO7; SHL4; SHO2; SHOOTLESS4
NM_001418339.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 2-like (LOC4336991), mRNA. (3478 bp)
LOCUS NM_001419865 3478 bp mRNA linear PLN 20-APR-2023 DEFINITION Oryza sativa Japonica Group protein argonaute 2-like (LOC4336991), mRNA. ACCESSION NM_001419865 XM_015780525 VERSION NM_001419865.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica...REFERENCE 1 (bases 1 to 3478) AUTHORS Wang Z, Chen D, Sun F, Guo W, Wang W, Li X, Lan Y, Du L, Li S, Fan Y, Zhou Y, Zhao H and Zhou T. TITLE ARGONAUTE 2 increases rice susceptibility to rice black-streaked dwarf virus infection by epigenetically regulating HEXOKINASE 1 expression JOURNAL Mol Plant...
Synonym: AGO2; OsAGO2
NM_001419865.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 3-like (LOC4336992), mRNA. (3356 bp)
LOCUS NM_001419866 3356 bp mRNA linear PLN 20-APR-2023 DEFINITION Oryza sativa Japonica Group protein argonaute 3-like (LOC4336992), mRNA. ACCESSION NM_001419866 XM_015780526 VERSION NM_001419866.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The...
Synonym: AGO3; OsAGO3
NM_001419866.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 18-like (LOC4343201), mRNA. (3833 bp)
gene="LOC4343201" /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18" /note="protein argonaute 18-like" /db_xref="GeneID:4343201" exon 1..1164 /gene="LOC4343201" /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18" /inference="alignment:Splign:2.1.0" misc_feature 211..213 /gene="LOC4343201" /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18" /note="upstream in-frame stop codon" CDS 298..3564 /gene="LOC4343201" /gene_synonym="AGO18; OJ1103_E04.115; OsAGO18" /note="putative leaf development protein Argonaute; P0675B10.105; LOC_Os07g28850" /codon_start=1 /product="protein argonaute 18" /protein_id="NP...
Synonym: AGO18; OJ1103_E04.115; OsAGO18
NM_001422151.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 14-like (LOC4342603), mRNA. (3539 bp)
Japonica Group" /mol_type="mRNA" /db_xref="taxon:39947" /chromosome="7" /map="7" gene 1..3539 /gene="LOC4342603" /gene_synonym="AGO14; OsAGO14" /note="protein argonaute 14-like" /db_xref="GeneID:4342603" exon 1..764 /gene="LOC4342603" /gene_synonym="AGO14; OsAGO14" /inference="alignment:Splign:2.1.0" CDS 87..3245 /gene="LOC4342603" /gene_synonym="AGO14; OsAGO14" /note="OSJNBb0002L09.2; putative leaf development protein Argonaute; OSJNBb0084L07.14; LOC_Os07g09020" /codon_start=1 /product="protein argonaute 14" /protein_id="NP_001408940.1" /db_xref="GeneID:4342603" /translation="...
Synonym: AGO14; OsAGO14
NM_001422011.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute MEL1-like (LOC4334449), mRNA. (3476 bp)
Oryza sativa Japonica Group" /mol_type="mRNA" /db_xref="taxon:39947" /chromosome="3" /map="3" gene 1..3476 /gene="LOC4334449" /gene_synonym="MEAL1; MEL1; OsMEL1" /note="protein argonaute MEL1-like" /db_xref="GeneID:4334449" exon 1..767 /gene="LOC4334449" /gene_synonym="MEAL1; MEL1; OsMEL1" /inference="alignment:Splign:2.1.0" CDS 72..3248 /gene="LOC4334449" /gene_synonym="MEAL1; MEL1; OsMEL1" /note="ARGONAUTE family protein; LOC_Os03g58600; OSJNBa0052F07.11; Protein MEIOSIS ARRESTED AT LEPTOTENE 1" /codon_start=1 /product="protein argonaute MEL1" /protein_id="NP_001405763.1" /db_xref="GeneID...
Synonym: MEAL1; MEL1; OsMEL1
NM_001418834.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute PNH1-like (LOC9269490), mRNA. (3683 bp)
LOCUS NM_001424295 3683 bp mRNA linear PLN 24-SEP-2023 DEFINITION Oryza sativa Japonica Group protein argonaute PNH1-like (LOC9269490), mRNA. ACCESSION NM_001424295 XM_015788315 VERSION NM_001424295.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The...
Synonym: OsPNH1; PHN1
NM_001424295.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 1C-like (LOC4331253), mRNA. (3638 bp)
LOCUS NM_001423879 3638 bp mRNA linear PLN 17-AUG-2023 DEFINITION Oryza sativa Japonica Group protein argonaute 1C-like (LOC4331253), mRNA. ACCESSION NM_001423879 XM_015770982 VERSION NM_001423879.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The...
Synonym: AGO1; AGO1C; OJ1149_C12.13; OsAGO1; OsAGO1c; OsJ_08998
NM_001423879.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 17-like (LOC4328436), transcript variant X2, mRNA. (2409 bp)
misc_feature 239..520 /gene="LOC4328436" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature 653..2008 /gene="LOC4328436" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of...
XM_015768524.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 1D-like (LOC4342138), mRNA. (3757 bp)
LOCUS NM_001402967 3757 bp mRNA linear PLN 24-MAR-2022 DEFINITION Oryza sativa Japonica Group protein argonaute 1D-like (LOC4342138), mRNA. ACCESSION NM_001402967 XM_015787025 VERSION NM_001402967.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The...
Synonym: AGO1D; OsAGO1d
NM_001402967.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 1B-like (LOC9270411), transcript variant 2, mRNA. (3845 bp)
LOCUS NM_001404898 3845 bp mRNA linear PLN 01-JAN-2023 DEFINITION Oryza sativa Japonica Group protein argonaute 1B-like (LOC9270411), transcript variant 2, mRNA. ACCESSION NM_001404898 XM_015780806 VERSION NM_001404898.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or...
Synonym: AGO1B; OsAGO1b
NM_001404898.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 1B-like (LOC9270411), transcript variant 1, mRNA. (3812 bp)
LOCUS NM_001404897 3812 bp mRNA linear PLN 01-JAN-2023 DEFINITION Oryza sativa Japonica Group protein argonaute 1B-like (LOC9270411), transcript variant 1, mRNA. ACCESSION NM_001404897 XM_015780805 VERSION NM_001404897.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or...
Synonym: AGO1B; OsAGO1b
NM_001404897.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC9269807), mRNA. (2714 bp)
misc_feature 269..493 /gene="LOC9269807" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" misc_feature 536..670 /gene="LOC9269807" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:430160" misc_feature 671..1015 /gene="LOC9269807" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_...
XM_026022702.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC107280339), mRNA. (462 bp)
LOCUS XM_015774169 462 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC107280339), mRNA. ACCESSION XM_015774169 VERSION XM_015774169.1 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq; includes ab initio. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_015774169.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 1A-like (LOC4330281), mRNA. (3852 bp)
LOCUS NM_001416817 3852 bp mRNA linear PLN 19-FEB-2023 DEFINITION Oryza sativa Japonica Group protein argonaute 1A-like (LOC4330281), mRNA. ACCESSION NM_001416817 XM_015770610 VERSION NM_001416817.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The...
Synonym: AGO1A; OJ1493_H11.13; OsAGO1a
NM_001416817.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 2-like (LOC107278296), mRNA. (1412 bp)
LOCUS XM_015763214 1412 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 2-like (LOC107278296), mRNA. ACCESSION XM_015763214 VERSION XM_015763214.2 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated computational...
XM_015763214.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC112938223), transcript variant X2, mRNA. (2522 bp)
LOCUS XM_026023845 2522 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC112938223), transcript variant X2, mRNA. ACCESSION XM_026023845 VERSION XM_026023845.1 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_026023845.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group protein argonaute 4B-like (LOC4335025), mRNA. (3374 bp)
LOCUS NM_001419070 3374 bp mRNA linear PLN 30-MAR-2023 DEFINITION Oryza sativa Japonica Group protein argonaute 4B-like (LOC4335025), mRNA. ACCESSION NM_001419070 XM_015781187 VERSION NM_001419070.1 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The...
Synonym: AGO4B; OsAGO4b; OsJ_13701
NM_001419070.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 18-like (LOC4349880), transcript variant X2, mRNA. (1273 bp)
LOCUS XM_026021599 1273 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 18-like (LOC4349880), transcript variant X2, mRNA. ACCESSION XM_026021599 VERSION XM_026021599.1 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_026021599.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 12 (LOC107275269), mRNA. (3485 bp)
LOCUS XM_015774409 3485 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 12 (LOC107275269), mRNA. ACCESSION XM_015774409 VERSION XM_015774409.2 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis....
XM_015774409.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 15 (LOC4324436), mRNA. (4267 bp)
LOCUS XM_026022540 4267 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 15 (LOC4324436), mRNA. ACCESSION XM_026022540 VERSION XM_026022540.1 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq; includes ab initio. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated...
XM_026022540.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 4A-like (LOC4324438), transcript variant X2, mRNA. (3068 bp)
LOCUS XM_015765588 3068 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 4A-like (LOC4324438), transcript variant X2, mRNA. ACCESSION XM_015765588 VERSION XM_015765588.2 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_015765588.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 4A-like (LOC4324438), transcript variant X1, mRNA. (3118 bp)
LOCUS XM_015765587 3118 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 4A-like (LOC4324438), transcript variant X1, mRNA. ACCESSION XM_015765587 VERSION XM_015765587.2 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_015765587.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 13-like (LOC4334374), mRNA. (4728 bp)
misc_feature 634..978 /gene="LOC4334374" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(781..783,826..828,859..861,871..873,925..927, 946..948,952..954) /gene="LOC4334374" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1114..2460 /gene="...
XM_015775890.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute PNH1-like (LOC9269490), transcript variant X2, mRNA. (3440 bp)
LOCUS XM_015788316 3440 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute PNH1-like (LOC9269490), transcript variant X2, mRNA. ACCESSION XM_015788316 VERSION XM_015788316.2 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_015788316.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 1C-like (LOC4331253), transcript variant X2, mRNA. (3659 bp)
LOCUS XM_015770983 3659 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 1C-like (LOC4331253), transcript variant X2, mRNA. ACCESSION XM_015770983 VERSION XM_015770983.2 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_015770983.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute PNH1-like (LOC9269490), transcript variant X1, mRNA. (3434 bp)
LOCUS XM_026026249 3434 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute PNH1-like (LOC9269490), transcript variant X1, mRNA. ACCESSION XM_026026249 VERSION XM_026026249.1 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_026026249.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 12-like (LOC107278545), transcript variant X3, mRNA. (1437 bp)
LOCUS XM_015777723 1437 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 12-like (LOC107278545), transcript variant X3, mRNA. ACCESSION XM_015777723 VERSION XM_015777723.2 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_015777723.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 1A-like (LOC4330281), transcript variant X3, mRNA. (3867 bp)
LOCUS XM_015770612 3867 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 1A-like (LOC4330281), transcript variant X3, mRNA. ACCESSION XM_015770612 VERSION XM_015770612.2 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_015770612.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 1A-like (LOC4330281), transcript variant X2, mRNA. (3851 bp)
LOCUS XM_015770611 3851 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 1A-like (LOC4330281), transcript variant X2, mRNA. ACCESSION XM_015770611 VERSION XM_015770611.2 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_015770611.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 11-like (LOC4333733), mRNA. (3638 bp)
misc_feature 388..3150 /gene="LOC4333733" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 1645..3015 /gene="LOC4333733" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the...; Region: Piwi_ago-like; cd04657" /db_xref="CDD:240015" misc_feature order(2089..2091,2101..2103,2137..2148,2155..2157, 2179..2181,2188..2190,2200..2202,2212..2214) /gene="...
XM_015774404.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 18-like (LOC4349880), transcript variant X1, mRNA. (1236 bp)
LOCUS XM_015762133 1236 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 18-like (LOC4349880), transcript variant X1, mRNA. ACCESSION XM_015762133 VERSION XM_015762133.2 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_015762133.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 12-like (LOC107278545), transcript variant X2, mRNA. (1556 bp)
LOCUS XM_026024263 1556 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 12-like (LOC107278545), transcript variant X2, mRNA. ACCESSION XM_026024263 VERSION XM_026024263.1 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_026024263.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 12-like (LOC107278545), transcript variant X1, mRNA. (1559 bp)
LOCUS XM_026024262 1559 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 12-like (LOC107278545), transcript variant X1, mRNA. ACCESSION XM_026024262 VERSION XM_026024262.1 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_026024262.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC112938223), transcript variant X1, mRNA. (2480 bp)
LOCUS XM_026023844 2480 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute MEL1-like (LOC112938223), transcript variant X1, mRNA. ACCESSION XM_026023844 VERSION XM_026023844.1 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by...
XM_026023844.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group protein argonaute 16-like (LOC4342886), mRNA. (3369 bp)
LOCUS XM_015792104 3369 bp mRNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group protein argonaute 16-like (LOC4342886), mRNA. ACCESSION XM_015792104 VERSION XM_015792104.2 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq; corrected model. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated...
XM_015792104.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI
Oryza sativa Japonica Group hexokinase-1-like (LOC4343113), mRNA. (1650 bp)
note="propagated from UniProtKB/Swiss-Prot (Q8LH82.1); Region: Hexokinase large subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01084" ORIGIN // REFERENCE 1 (bases 1 to 1650) AUTHORS Wang Z, Chen D, Sun F, Guo W, Wang W, Li X, Lan Y, Du L, Li S, Fan Y, Zhou Y, Zhao H and Zhou T. TITLE ARGONAUTE 2 increases rice susceptibility to rice black-streaked dwarf virus infection by epigenetically regulating HEXOKINASE 1 expression JOURNAL Mol Plant Pathol 22 (9), 1029-1040 (2021) PUBMED 34110094 REMARK GeneRIF: ARGONAUTE 2 increases rice susceptibility to rice black-streaked dwarf virus infection...
Synonym: HXK1
NM_001422125.1 - Oryza sativa Japonica Group (Japanese rice) - NCBI
PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4332859 (LOC4332859), mRNA. (3519 bp)
misc_feature 686..>1360 /gene="LOC4332859" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 716..943 /gene="LOC4332859" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:435368" ORIGIN //...
XM_015773900.2 - Oryza sativa Japonica Group (Japanese rice) - NCBI

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Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/os/Argonaute
lang : en | div : | spe : os | query_string : Argonaute | format : html | download :

0.000 | 0.000 | search_start;
0.149 | 0.149 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Oryza sativa Japonica Group (Japanese rice)?to=0&format=json
0.242 | 0.093 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Oryza sativa Japonica Group (Japanese rice)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.246 | 0.004 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]