GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2024-11-23 17:14:46, GGRNA : RefSeq release 226 (Sep, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Mus musculus cystatin A family member 2 (Csta2), transcript variant 1, mRNA. (417 bp)
stop codon" CDS 49..342 /gene="Csta2" /gene_synonym="2010005H15Rik" /codon_start=1 /product="Cystatin-A-like" /protein_id="NP_001371019.1" /db_xref="GeneID:76770" /db_xref="MGI:MGI:1924020" /translation="MMPGGLSRARSATPEIQEIANKVKSLLEEKTNEKYEVFKAVEYKSQVVAGQNYFIKMDVGGGCFLHIKVFTGISGENVLELSGYQTNKTRKDELSYF" misc_feature 58..318 /gene="Csta2" /gene_synonym="2010005H15Rik" /note="Cystatin domain; Region: Cystatin; pfam00031" /db_xref="CDD:425431" misc_feature order(184..192,196..198) /gene="Csta2" /gene_synonym="2010005H15Rik" /note="putative proteinase inhibition site [active]" /db_xref="CDD:238002"...
AA_position 91
Synonym: 2010005H15Rik
NM_001384090.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus cystatin domain containing 4 (Cstdc4), mRNA. (414 bp)
Cstdc4" /gene_synonym="EG433016; Gm5483" /codon_start=1 /product="EG433016 protein" /protein_id="NP_001076016.1" /db_xref="CCDS:CCDS37328.1" /db_xref="GeneID:433016" /db_xref="MGI:MGI:3645124" /translation="MMPGGLSRARSATPEIQEIADKVKSLLEEKTNEKYEVFKAVEYKSQVVAGQNYFIKMDVGGGCFLHIKVFKGISGENVLELHGYQTNKTRKDELSYF" misc_feature 58..318 /gene="Cstdc4" /gene_synonym="EG433016; Gm5483" /note="Cystatin domain; Region: Cystatin; pfam00031" /db_xref="CDD:425431" misc_feature order(184..192,196..198) /gene="Cstdc4" /gene_synonym="EG433016; Gm5483" /note="putative proteinase inhibition site [active]" /db_xref="...
AA_position 91
Synonym: EG433016; Gm5483
NM_001082547.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus cystatin A family member 2 (Csta2), transcript variant 2, mRNA. (528 bp)
gene="Csta2" /gene_synonym="2010005H15Rik" /codon_start=1 /product="Cystatin-A-like" /protein_id="NP_084009.1" /db_xref="CCDS:CCDS37330.1" /db_xref="GeneID:76770" /db_xref="MGI:MGI:1924020" /translation="MMPGGLSRARSATPEIQEIANKVKSLLEEKTNEKYEVFKAVEYKSQVVAGQNYFIKMDVGGGCFLHIKVFTGISGENVLELSGYQTNKTRKDELSYF" misc_feature 189..449 /gene="Csta2" /gene_synonym="2010005H15Rik" /note="Cystatin domain; Region: Cystatin; pfam00031" /db_xref="CDD:425431" misc_feature order(315..323,327..329) /gene="Csta2" /gene_synonym="2010005H15Rik" /note="putative proteinase inhibition site [active]" /db_xref="CDD...
AA_position 91
Synonym: 2010005H15Rik
NM_029733.3 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus cytoplasmic polyadenylated homeobox 1 (Cphx1), mRNA. (1653 bp)
homeobox 2; cytoplasmic polyadenylated homeobox 3" /codon_start=1 /product="cytoplasmic polyadenylated homeobox 1" /protein_id="NP_780551.1" /db_xref="CCDS:CCDS26877.1" /db_xref="GeneID:105594" /db_xref="MGI:MGI:2145733" /translation="MLSKNFPGAPETKDNRSKARKRYGSRNSKPRHKFSRDELKRLKQEFAYAPYPDFTTKDELARQFQCEVSVIDNWFQNKRARLAPELKSKISAMRRMRRCQDYMRTGHQDTQPPKASGEQYSSCDSVVRSIGRQSIGTVEHQGAAGRESSFRPTNFTFPPVYEQYYMGDQLETQETQYFTFSY" misc_feature 129..290 /gene="Cphx1" /gene_synonym="C330003B14Rik; Cphx; Cphx2; Cphx3; Eso-1; Gm2104; Gm2135" /note="Homeodomain; DNA binding domains involved in the transcriptional...
AA_position 57
Synonym: C330003B14Rik; Cphx; Cphx2; Cphx3; Eso-1; Gm2104; Gm2135
NM_175342.3 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus killer cell lectin-like receptor, subfamily A, member 15 (Klra15), mRNA. (1083 bp)
gene_synonym="Ly49O" /codon_start=1 /product="killer cell lectin-like receptor, subfamily A, member 15" /protein_id="NP_038821.2" /db_xref="GeneID:27423" /db_xref="MGI:MGI:1351665" /translation="MSEQEVTYSMVRFHKSAGLQKQVRPEETKGPREAGYRRCSFHWKFIVIALGIFCFLLLVAVSVLAIKIFQYDQQKKLQEILNHHNNCSNMQSDINLKDELLKNKSIECDLLESLNRDQNRLYNKTKTVLDSLKHTGRGVKVYWFCYGMKCYYFVMDRKPWSRCKQSCQNSSLFLLKIDDEDELKFLQLVVPSDSCWIGLSYDNKKKDWAWIENGPSKLALNTTKYNIRDGGCMFLSKTRLDNNYCDQSFICICGKRLDKFPH" misc_feature 118..459 /gene="Klra15" /gene_synonym="Ly49O" /note="Ly49-like protein, N-terminal region; Region: Ly49; pfam08391" /db_xref="...
AA_position 97
Synonym: Ly49O
NM_013793.2 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus killer cell lectin-like receptor, subfamily A, member 18 (Klra18), mRNA. (1239 bp)
gene_synonym="Ly49r" /codon_start=1 /product="killer cell lectin-like receptor, subfamily A, member 18" /protein_id="NP_444383.1" /db_xref="GeneID:93970" /db_xref="MGI:MGI:2136935" /translation="MTEQKDTFSAVRFHKSSGLQNEMRLKETRKPRKAGLRVCSVPWQFIVIALGILISLRLVIVAVLMTNIFQYGQQKHELQEFLKHHNNCSIMQSDINLKDELLKNKSIECNLLESINRDQNRLYNKTKTVLDSLQHTGRGVKVYWFCYGMKCYYFIMDRKPWSRCKQSCQNSSLTLLKIDNEDELKFLQLVVPSDSCWIGLSYDNKKKDWAWIDNRPSKLALNTTKYNIRDGGCMFLSKTRLDNNYCDQSFICICGKRLDKFPH" misc_feature 262..606 /gene="Klra18" /gene_synonym="Ly49r" /note="Ly49-like protein, N-terminal region; Region: Ly49; pfam08391" /db_xref="...
AA_position 98
Synonym: Ly49r
NM_053153.2 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus killer cell lectin-like receptor subfamily A, member 12 (Klra12), mRNA. (870 bp)
subfamily A protein" /codon_start=1 /product="killer cell lectin-like receptor subfamily A, member 12" /protein_id="NP_034776.1" /db_xref="GeneID:16630" /db_xref="MGI:MGI:1321091" /translation="MSEQEVTFSAVRFHKSSGLQNRVRLEETGKPQKAGLRVPWQLIVIALGILISLRLVIVSVLVTNIFQNSQQNHELQETLNCHDKCSTTTQSDINLKDELLSSTSIECRPGNDLLESLHKEQNRWYSETKTFSDSSQHTGRGFEKYWFCYGIKCYYFVMDRKTWSGCKQTCQISSLSLLKIDNEDELKFLKLLVPSDSCWIGLSYDNKKKDWAWINNGPSKLALNTMKYNIRDGGCMLLSKTRLDNDNCDKSFICICGKRLDKFPH" misc_feature 169..525 /gene="Klra12" /gene_synonym="Ly49L; Ly49l1; Ly49l2; Ly49l3; Ly49l4; Ly49p/d" /note="Ly49-like protein, N-terminal...
AA_position 96
Synonym: Ly49L; Ly49l1; Ly49l2; Ly49l3; Ly49l4; Ly49p/d
NM_010646.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus killer cell lectin-like receptor subfamily A, member 21 (Klra21), mRNA. (1150 bp)
A, member 21" /protein_id="NP_444381.1" /db_xref="GeneID:93968" /db_xref="MGI:MGI:2136938" /translation="MSEQEVTFPTMRFHKSSGLNSQVRLEGTQRSRKAGLRVCSVPWQLIVIALGILCSLRLVIVAVFVTKIFQYSQHKQEINETLNHHHNCSNMQRDFNLKEEMLTNKSIDCRPSYELLEYIKREQDRWDSETKTVLHSTQNTGRGVKYWFCYSTKCYYFIMNKTTWSGCKANCQHYSVPIVNIEDKDELKFLQRHVITEGYWIGLSYDKKKKEWAWIDNGQSKLDMKIRKMNFKSRGCVFLSKARIEDTDCNIPYYCICGKKLDKFPD" misc_feature 230..583 /gene="Klra21" /gene_synonym="Klra-ps1; Ly49H; Ly49u" /note="Ly49-like protein, N-terminal region; Region: Ly49; pfam08391" /db_xref="CDD:462461" misc_feature 545..889 /gene="Klra21" /gene_synonym="Klra-...
AA_position 184
Synonym: Klra-ps1; Ly49H; Ly49u
NM_053151.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus killer cell lectin-like receptor subfamily A, member 23 (Klra23), mRNA. (942 bp)
subfamily A, member 17" /codon_start=1 /product="killer cell lectin-like receptor subfamily A, member 23" /protein_id="NP_077790.1" /db_xref="GeneID:79410" /db_xref="MGI:MGI:1930932" /translation="MSEQEVTFSAVRFHKSSGLQNRVRLEETGKPQKAGLRVCSVPWQLIVIALGILISLRLVIVSVLVTNIFQNSQQNHELQETLNCHDKCSTTTQSDINLKDELLSSTSIECRPGNDLLESLHKEQNRWYSETKTFSDSSQHTGRGFEKYWFCYGIKCYYFVMDRKTWSGCKQTCQISSLSLLKIDNEDELKFLQNLAPSDISWIGFSYDNKKKDWVWIDNGPSKLALNTTKYNIRDGLCMSLSKTRLDNGDCGKSYICICGKRLDKFPH" misc_feature 241..600 /gene="Klra23" /gene_synonym="Ly-49W1; Ly-49W2; Ly49W" /note="Ly49-like protein, N-terminal region; Region:...
AA_position 99
Synonym: Ly-49W1; Ly-49W2; Ly49W
NM_024470.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus solute carrier family 25 (mitochondrial carrier, ornithine transporter) member 2 (Slc25a2), mRNA; nuclear gene for mitochondrial product. (1346 bp)
protein_id="NP_001152747.1" /db_xref="CCDS:CCDS50258.1" /db_xref="GeneID:83885" /db_xref="MGI:MGI:2137907" /translation="MQTFPQLYKGLADCFLKTYNQVGIRGLYRGTSPALLAYVTQGSVLFMCFGFCQQFVRKVARVEQNAELNDLETATAGSLASAFAALALCPTELVKCRLQTMYEMKMSGKIAQSYNTIWSMVKSIFMKDGPLGFYRGLSTTLAQEIPGYFFYFGGYEISRSFFASGGSKDELGPVPLMLSGGFAGICLWLIIFPVDCIKSRIQVLSMFGKPAGLIETFISVVRNEGISALYSGLKATLIRAIPSNAALFLVYEYSRKMMMNMVEEY" misc_feature <250..423 /gene="Slc25a2" /gene_synonym="Ornt2" /note="Mitochondrial carrier protein; Region: Mito_carr; pfam00153" /db_xref="CDD:395101" misc_feature <514..735 /gene="Slc25a2" /gene_synonym="...
AA_position 168
Synonym: Ornt2
NM_001159275.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus sulfotransferase family 3A, member 2 (Sult3a2), mRNA. (882 bp)
GeneID:215895" /db_xref="MGI:MGI:3645972" /translation="MDNKDEDIFKFKGYNFLRALVSMDIVKNMEDYEIRDDDIFIVTYPKSGTTWTQQILCLICFESHRNGTENIATIDRIPSFEYNIHKLDYAKMPSPRIFTSHIPYYLVPKGLKDKKAKIIYVYRNPKDVLISFFHFSNLMVVLKASDTLENFMQRFLNGNLVGSLWFDHIRGWYEHRHDFNIMFMSFEDMKKDLRSSVLKICSFLEKELSEEDMDAVVRQATFEKMKADPRANNEHIIKDELGTRNNTGAFLRKGIVGDWKHYLTVDQSERFDKIFHMNMKNIPLKFIWNINEK" misc_feature 106..840 /gene="Sult3a2" /gene_synonym="EG215895; Gm4794" /note="Sulfotransferase domain; Region: Sulfotransfer_1; pfam00685" /db_xref="CDD:425820" exon 1..142 /gene="Sult3a2" /gene_synonym="EG215895; Gm4794" /inference="alignment:...
AA_position 238
Synonym: EG215895; Gm4794
NM_001101452.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus calreticulin 4 (Calr4), transcript variant 5, mRNA. (2161 bp)
GPDICGFGNNRLQVILSHKGKYHENNKTLKCRINKDTHLYTLILRPNATYEVKIDNQKVTSGGLEDDWDFLPPKKIKDPYARKPRKWDERQQIEDPDDKKPEDWEDSEFIPDPDAKKPDDWNEAMDGVWEGPLIPNVKYMGEWKPRIIDNPNYQGEWIHPEIDNPKYRPDPTIGHYHNISVLGLDLWQVKSGSIFDNFLLTNDEEFAEEVGNMTWGLRKDVEQQWRELYEEMEKQKEAEETKKKREKERARQEDVWGLDEEDEEDAEEDDEEEAEERLKQEGSAARASLDQKEAHLDQKDEL" misc_feature <644..1276 /gene="Calr4" /gene_synonym="4933403L16Rik" /note="Calreticulin family; Region: Calreticulin; pfam00262" /db_xref="CDD:459737" exon 678..772 /gene="Calr4" /gene_synonym="4933403L16Rik" /inference="alignment:Splign:2.1.0" exon 773..982 /gene="Calr4" /gene_synonym...
AA_position 310
Synonym: 4933403L16Rik
NM_001285898.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus calreticulin 4 (Calr4), transcript variant 4, mRNA. (2151 bp)
GPDICGFGNNRLQVILSHKGKYHENNKTLKCRINKDTHLYTLILRPNATYEVKIDNQKVTSGGLEDDWDFLPPKKIKDPYARKPRKWDERQQIEDPDDKKPEDWEDSEFIPDPDAKKPDDWNEAMDGVWEGPLIPNVKYMGEWKPRIIDNPNYQGEWIHPEIDNPKYRPDPTIGHYHNISVLGLDLWQVKSGSIFDNFLLTNDEEFAEEVGNMTWGLRKDVEQQWRELYEEMEKQKEAEETKKKREKERARQEDVWGLDEEDEEDAEEDDEEEAEERLKQEGSAARASLDQKEAHLDQKDEL" misc_feature <634..1266 /gene="Calr4" /gene_synonym="4933403L16Rik" /note="Calreticulin family; Region: Calreticulin; pfam00262" /db_xref="CDD:459737" exon 668..762 /gene="Calr4" /gene_synonym="4933403L16Rik" /inference="alignment:Splign:2.1.0" exon 763..972 /gene="Calr4" /gene_synonym...
AA_position 310
Synonym: 4933403L16Rik
NM_001285897.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus calreticulin 4 (Calr4), transcript variant 3, mRNA. (1909 bp)
GPDICGFGNNRLQVILSHKGKYHENNKTLKCRINKDTHLYTLILRPNATYEVKIDNQKVTSGGLEDDWDFLPPKKIKDPYARKPRKWDERQQIEDPDDKKPEDWEDSEFIPDPDAKKPDDWNEAMDGVWEGPLIPNVKYMGEWKPRIIDNPNYQGEWIHPEIDNPKYRPDPTIGHYHNISVLGLDLWQVKSGSIFDNFLLTNDEEFAEEVGNMTWGLRKDVEQQWRELYEEMEKQKEAEETKKKREKERARQEDVWGLDEEDEEDAEEDDEEEAEERLKQEGSAARASLDQKEAHLDQKDEL" misc_feature <392..1024 /gene="Calr4" /gene_synonym="4933403L16Rik" /note="Calreticulin family; Region: Calreticulin; pfam00262" /db_xref="CDD:459737" exon 426..520 /gene="Calr4" /gene_synonym="4933403L16Rik" /inference="alignment:Splign:2.1.0" exon 521..730 /gene="Calr4" /gene_synonym...
AA_position 310
Synonym: 4933403L16Rik
NM_001285896.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus trafficking protein particle complex 6B (Trappc6b), transcript variant 3, mRNA. (1539 bp)
transcript variant 3; trafficking protein particle complex subunit 6B; TRAPP complex subunit 6B" /codon_start=1 /product="trafficking protein particle complex subunit 6B isoform 3" /protein_id="NP_001293147.1" /db_xref="GeneID:78232" /db_xref="MGI:MGI:1925482" /translation="MGFRVGQGLIERFTKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLIQLSAGKQYLEHASKYLAFTCGLIRGGLSNLGIKSIVTAEVSSMPACKFQVMIQKL" misc_feature <607..960 /gene="Trappc6b" /gene_synonym="5830498C14Rik" /note="Trs33 subunit of the TRAPP complex; Region: TRAPPC6A_Trs33; cd14944" /db_xref="CDD:271347" exon 642..759 /gene="Trappc6b" /...
AA_position 21
Synonym: 5830498C14Rik
NM_001306218.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus trafficking protein particle complex 6B (Trappc6b), transcript variant 2, mRNA. (1189 bp)
TRAPP complex subunit 6B" /codon_start=1 /product="trafficking protein particle complex subunit 6B isoform 2" /protein_id="NP_001293146.1" /db_xref="CCDS:CCDS88340.1" /db_xref="GeneID:78232" /db_xref="MGI:MGI:1925482" /translation="MADEALFLLLHNEMVSGVYKSAEQGEVENGRCVTKLESMGFRVGQGLIERFTKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLIQLSAGKQYLEHASKANFR" misc_feature 243..>587 /gene="Trappc6b" /gene_synonym="5830498C14Rik" /note="Trs33 subunit of the TRAPP complex; Region: TRAPPC6A_Trs33; cd14944" /db_xref="CDD:271347" misc_feature order(249..251,258..260,270..272,543..548,576..578) /gene="...
AA_position 59
Synonym: 5830498C14Rik
NM_001306217.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus glycosylation dependent cell adhesion molecule 1 (Glycam1), transcript variant 1, mRNA. (683 bp)
Glycosylation-dependent cell adhesion molecule 1" /codon_start=1 /product="glycosylation-dependent cell adhesion molecule 1 isoform 1 precursor" /protein_id="NP_001276516.1" /db_xref="CCDS:CCDS88862.1" /db_xref="GeneID:14663" /db_xref="MGI:MGI:95759" /translation="MKFFTVLLFVSLAATSLALLPGSKDELQMKTQPTDAIPAAQSTPTSYTSEESTSSKDLSKEPSIFREELISKDNVVIESTKPENQEAQDGLRSGSSQLEETTRPTTSAGMSQGRRKMSWEVQPPQRKI" sig_peptide 51..107 /gene="Glycam1" /gene_synonym="glyCAM-1; MC26; Sgp50" /note="/evidence=ECO:0000269|PubMed:1376638; propagated from UniProtKB/Swiss-Prot (Q02596.1)" misc_feature 108..>374 /gene="...
AA_position 24
Synonym: glyCAM-1; MC26; Sgp50
NM_001289587.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus methyltransferase 14, N6-adenosine-methyltransferase subunit (Mettl14), mRNA. (2625 bp)
like 14" /codon_start=1 /product="N6-adenosine-methyltransferase non-catalytic subunit" /protein_id="NP_964000.2" /db_xref="CCDS:CCDS38622.1" /db_xref="GeneID:210529" /db_xref="MGI:MGI:2442926" /translation="MDSRLQEIRERQKLRRQLLAQQLGAESADSIGAVLNSKDEQREIAETRETCRASYDTSAPNSKRKCLDEGETDEDKVEEYKDELEMQQEEENLPYEEEIYKDSSTFLKGTQSLNPHNDYCQHFVDTGHRPQNFIRDVGLADRFEEYPKLRELIRLKDELIAKSNTPPMYLQADIEAFDIRELTPKFDVILLEPPLEEYYRETGITANEKCWTWDDIMKLEIDEIAAPRSFIFLWCGSGEGLDLGRVCLRKWGYRRCEDICWIKTNKNNPGKTKTLDPKAVFQRTKEHCLMGIKGTVKRSTDGDFIHANVDIDLIITEEPEIGNIEKPVEIFHIIEHFCLGRRRLHLFGRDSTIRPGWLTVGPTLTNSNYNAETYASYFSAPNSYLTGCTEEI...
AA_position 81
Synonym: G430022H21Rik; mKIAA1627
NM_201638.2 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus glia maturation factor, beta (Gmfb), mRNA. (4171 bp)
D14Ertd630e" /note="GMF-beta" /codon_start=1 /product="glia maturation factor beta" /protein_id="NP_071306.2" /db_xref="CCDS:CCDS36898.1" /db_xref="GeneID:63985" /db_xref="MGI:MGI:1927133" /translation="MSESLVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELEGVSPDELKDELPERQPRFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGFFH" misc_feature 143..145 /gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /note="N-acetylserine. /evidence=ECO:0000250|UniProtKB:P60984; propagated from UniProtKB/Swiss-Prot (Q9CQI3.3); acetylation site" misc_feature 164..529 /gene="...
AA_position 58
Synonym: 3110001H22Rik; 3110001O16Rik; D14Ertd630e
NM_022023.2 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus glycosylation dependent cell adhesion molecule 1 (Glycam1), transcript variant 2, mRNA. (645 bp)
GlyCAM 1; Glycosylation-dependent cell adhesion molecule 1" /codon_start=1 /product="glycosylation-dependent cell adhesion molecule 1 isoform 2 precursor" /protein_id="NP_032160.1" /db_xref="CCDS:CCDS27905.1" /db_xref="GeneID:14663" /db_xref="MGI:MGI:95759" /translation="MKFFTVLLFVSLAATSLALLPGSKDELQMKTQPTDAIPAAQSTPTSYTSEESTSSKDLSKEPSIFREELISKDNVVIESTKPENQEAQDGLRSGSSQLEETTRPTTSAATTSEENLTKSSQTVEEELGKIIEGFVTGAEDIISGASRITKS" sig_peptide 51..107 /gene="Glycam1" /gene_synonym="glyCAM-1; MC26; Sgp50" /note="/evidence=ECO:0000269|PubMed:1376638; propagated from UniProtKB/Swiss-Prot (Q02596.1)" mat_...
AA_position 24
Synonym: glyCAM-1; MC26; Sgp50
NM_008134.3 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus microfibrillar associated protein 5 (Mfap5), transcript variant 2, mRNA. (1469 bp)
microfibrillar-associated protein 5 isoform 2 precursor" /protein_id="NP_001334363.1" /db_xref="CCDS:CCDS85155.1" /db_xref="GeneID:50530" /db_xref="MGI:MGI:1354387" /translation="MLFLGQKALLLVLAISIPSDWLPLGVSGQRGDDVPETFTDDPNLVNDPSTDDTAGDKNATAECRDEKFACTRLYSVHRPVRQCVHQSCFTSLRRMYIINNEICSRLVCKEHEAMKDELCRQMAGLPPRRLRRSNYFRLPPCENMNLQRPDGL" sig_peptide 152..235 /gene="Mfap5" /gene_synonym="MAGP-2; MFAP-5" /inference="COORDINATES: ab initio prediction:SignalP:6.0" misc_feature 155..517 /gene="Mfap5" /gene_synonym="MAGP-2; MFAP-5" /note="Microfibril-associated glycoprotein (MAGP); Region: MAGP;...
AA_position 115
Synonym: MAGP-2; MFAP-5
NM_001347434.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
PREDICTED: Mus musculus glia maturation factor, beta (Gmfb), transcript variant X6, mRNA. (4361 bp)
db_xref="MGI:MGI:1927133" CDS 429..758 /gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /codon_start=1 /product="glia maturation factor beta isoform X3" /protein_id="XP_030103773.1" /db_xref="GeneID:63985" /db_xref="MGI:MGI:1927133" /translation="MKIDKDERLVVLDEELEGVSPDELKDELPERQPRFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGFFH" misc_feature <429..719 /gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /note="ADF-homology domain of glia maturation factor beta and related proteins; Region: ADF_GMF-beta_like; cd11283" /db_xref="...
AA_position 25
Synonym: 3110001H22Rik; 3110001O16Rik; D14Ertd630e
XM_030247913.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
PREDICTED: Mus musculus glia maturation factor, beta (Gmfb), transcript variant X5, mRNA. (4472 bp)
db_xref="MGI:MGI:1927133" CDS 540..869 /gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /codon_start=1 /product="glia maturation factor beta isoform X3" /protein_id="XP_036014671.1" /db_xref="GeneID:63985" /db_xref="MGI:MGI:1927133" /translation="MKIDKDERLVVLDEELEGVSPDELKDELPERQPRFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGFFH" misc_feature <540..830 /gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /note="ADF-homology domain of glia maturation factor beta and related proteins; Region: ADF_GMF-beta_like; cd11283" /db_xref="...
AA_position 25
Synonym: 3110001H22Rik; 3110001O16Rik; D14Ertd630e
XM_036158778.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
PREDICTED: Mus musculus glia maturation factor, beta (Gmfb), transcript variant X4, mRNA. (5227 bp)
db_xref="MGI:MGI:1927133" CDS 1295..1624 /gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /codon_start=1 /product="glia maturation factor beta isoform X3" /protein_id="XP_030103772.1" /db_xref="GeneID:63985" /db_xref="MGI:MGI:1927133" /translation="MKIDKDERLVVLDEELEGVSPDELKDELPERQPRFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGFFH" misc_feature <1295..1585 /gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /note="ADF-homology domain of glia maturation factor beta and related proteins; Region: ADF_GMF-beta_like; cd11283" /db_...
AA_position 25
Synonym: 3110001H22Rik; 3110001O16Rik; D14Ertd630e
XM_030247912.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
PREDICTED: Mus musculus glia maturation factor, beta (Gmfb), transcript variant X3, mRNA. (6822 bp)
db_xref="MGI:MGI:1927133" CDS 2890..3219 /gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /codon_start=1 /product="glia maturation factor beta isoform X3" /protein_id="XP_030103771.1" /db_xref="GeneID:63985" /db_xref="MGI:MGI:1927133" /translation="MKIDKDERLVVLDEELEGVSPDELKDELPERQPRFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGFFH" misc_feature <2890..3180 /gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /note="ADF-homology domain of glia maturation factor beta and related proteins; Region: ADF_GMF-beta_like; cd11283" /db_...
AA_position 25
Synonym: 3110001H22Rik; 3110001O16Rik; D14Ertd630e
XM_030247911.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus ring finger protein 122 (Rnf122), transcript variant 4, mRNA. (5411 bp)
homolog" /codon_start=1 /product="RING finger protein 122 isoform 4" /protein_id="NP_780345.1" /db_xref="CCDS:CCDS22220.1" /db_xref="GeneID:68867" /db_xref="MGI:MGI:1916117" /translation="MHPFQWCNGCFCGLGLVSTNKSCSMPPISFQDLPLNIYMVIFGTGIFVFMLSLIFCCYFISKLRNQAQSERYGYKEVVLKGDAKKLQLYGTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIAGPTETSQSIGILLDELV" misc_feature 439..501 /gene="Rnf122" /gene_synonym="1110063C11Rik" /note="propagated from UniProtKB/Swiss-Prot (Q8BP31.1); transmembrane region" misc_feature 592..729 /gene="Rnf122" /gene_synonym="1110063C11Rik" /note="RING finger, H2 subclass, found in...
AA_position 102
Synonym: 1110063C11Rik
NM_175136.3 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
PREDICTED: Mus musculus glia maturation factor, beta (Gmfb), transcript variant X2, mRNA. (4192 bp)
db_xref="MGI:MGI:1927133" CDS 257..589 /gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /codon_start=1 /product="glia maturation factor beta isoform X2" /protein_id="XP_030103770.1" /db_xref="GeneID:63985" /db_xref="MGI:MGI:1927133" /translation="MKIDKDERLVVLDEELEGVSPDELKDELPERQPRTFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGFFH" misc_feature <257..550 /gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /note="ADF-homology domain of glia maturation factor beta and related proteins; Region: ADF_GMF-beta_like; cd11283" /db_xref...
AA_position 25
Synonym: 3110001H22Rik; 3110001O16Rik; D14Ertd630e
XM_030247910.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus ring finger protein 122 (Rnf122), transcript variant 3, mRNA. (5414 bp)
homolog" /codon_start=1 /product="RING finger protein 122 isoform 3" /protein_id="NP_001355304.1" /db_xref="CCDS:CCDS90381.1" /db_xref="GeneID:68867" /db_xref="MGI:MGI:1916117" /translation="MHPFQWCNGCFCGLGLVSTNKSCSMPPISFQDLPLNIYMVIFGTGIFVFMLSLIFCCYFISKLRNQAQSERYGYKEVVLKGDAKKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIAGPTETSQSIGILLDELV" misc_feature 439..501 /gene="Rnf122" /gene_synonym="1110063C11Rik" /note="propagated from UniProtKB/Swiss-Prot (Q8BP31.1); transmembrane region" misc_feature 592..732 /gene="Rnf122" /gene_synonym="1110063C11Rik" /note="RING finger, H2 subclass, found...
AA_position 103
Synonym: 1110063C11Rik
NM_001368375.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus trafficking protein particle complex 6B (Trappc6b), transcript variant 1, mRNA. (1283 bp)
TRAPP complex subunit 6B" /codon_start=1 /product="trafficking protein particle complex subunit 6B isoform 1" /protein_id="NP_084333.1" /db_xref="CCDS:CCDS25932.1" /db_xref="GeneID:78232" /db_xref="MGI:MGI:1925482" /translation="MADEALFLLLHNEMVSGVYKSAEQGEVENGRCVTKLESMGFRVGQGLIERFTKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLIQLSAGKQYLEHASKYLAFTCGLIRGGLSNLGIKSIVTAEVSSMPACKFQVMIQKL" misc_feature 243..704 /gene="Trappc6b" /gene_synonym="5830498C14Rik" /note="Trs33 subunit of the TRAPP complex; Region: TRAPPC6A_Trs33; cd14944" /db_xref="CDD:271347" misc_feature order...
AA_position 59
Synonym: 5830498C14Rik
NM_030057.3 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus calreticulin 4 (Calr4), transcript variant 2, mRNA. (1932 bp)
GPDICGFGNNRLQVILSHKGKYHENNKTLKCRINKDTHLYTLILRPNATYEVKIDNQKVTSGGLEDDWDFLPPKKIKDPYARKPRKWDERQQIEDPDDKKPEDWEDSEFIPDPDAKKPDDWNEAMDGVWEGPLIPNVKYMGEWKPRIIDNPNYQGEWIHPEIDNPKYRPDPTIGHYHNISVLGLDLWQVKSGSIFDNFLLTNDEEFAEEVGNMTWGLRKDVEQQWRELYEEMEKQKEAEETKKKREKERARQEDVWGLDEEDEEDAEEDDEEEAEERLKQEGSAARASLDQKEAHLDQKDEL" sig_peptide 94..147 /gene="Calr4" /gene_synonym="4933403L16Rik" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 130..1047 /gene="Calr4" /gene_synonym="4933403L16Rik" /note="Calreticulin family; Region: Calreticulin; pfam00262" /db_xref="CDD:459737" exon 245..448 /gene="...
AA_position 417
Synonym: 4933403L16Rik
NM_001033226.4 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus ring finger protein 122 (Rnf122), transcript variant 2, mRNA. (5188 bp)
finger protein 122 homolog" /codon_start=1 /product="RING finger protein 122 isoform 2" /protein_id="NP_001355303.1" /db_xref="GeneID:68867" /db_xref="MGI:MGI:1916117" /translation="MAGRRRLLAVEEGPVGPEGCFCGLGLVSTNKSCSMPPISFQDLPLNIYMVIFGTGIFVFMLSLIFCCYFISKLRNQAQSERYGYKEVVLKGDAKKLQLYGTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIAGPTETSQSIGILLDELV" misc_feature 369..506 /gene="Rnf122" /gene_synonym="1110063C11Rik" /note="RING finger, H2 subclass, found in RING finger protein 122 (RNF122) and similar proteins; Region: RING-H2_RNF122; cd16676" /db_xref="CDD:438338" misc_feature order...
AA_position 112
Synonym: 1110063C11Rik
NM_001368374.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus microfibrillar associated protein 5 (Mfap5), transcript variant 1, mRNA. (1505 bp)
associated protein 5 isoform 1 precursor" /protein_id="NP_056591.1" /db_xref="CCDS:CCDS20496.1" /db_xref="GeneID:50530" /db_xref="MGI:MGI:1354387" /translation="MLFLGQKALLLVLAISIPSDWLPLGVSGQRGDDVPETFTDDPNLVNDPSTDDTALADITPSTDDLAGDKNATAECRDEKFACTRLYSVHRPVRQCVHQSCFTSLRRMYIINNEICSRLVCKEHEAMKDELCRQMAGLPPRRLRRSNYFRLPPCENMNLQRPDGL" sig_peptide 152..235 /gene="Mfap5" /gene_synonym="MAGP-2; MFAP-5" /inference="COORDINATES: ab initio prediction:SignalP:6.0" misc_feature 155..553 /gene="Mfap5" /gene_synonym="MAGP-2; MFAP-5" /note="Microfibril-associated glycoprotein (MAGP); Region: MAGP; pfam05507" /db_...
AA_position 127
Synonym: MAGP-2; MFAP-5
NM_015776.3 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus EF-hand calcium binding domain 2 (Efcab2), mRNA. (3665 bp)
codon_start=1 /product="dynein regulatory complex protein 8" /protein_id="NP_080902.1" /db_xref="CCDS:CCDS15557.1" /db_xref="GeneID:68226" /db_xref="MGI:MGI:1915476" /translation="MAEERDAEGTEALIAELHKKIKDAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDFIAEIEEEEPTGYIRFEKFIPVMTRALVERRYRPAAEDILLRAFEVLDPAKRGFLTKDELVKYMTEEGEPFSQEEMEEMLSAAIDPESNTINYRDYITMMVVDEN" misc_feature 113..565 /gene="Efcab2" /gene_synonym="1700073K01Rik; D830011E08Rik" /note="calmodulin; Provisional; Region: PTZ00184" /db_xref="CDD:185504" exon 117..201 /gene="Efcab2" /gene_synonym="1700073K01Rik; D830011E08Rik" /inference="alignment:...
AA_position 116
Synonym: 1700073K01Rik; D830011E08Rik
NM_026626.3 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
PREDICTED: Mus musculus trafficking protein particle complex 6B (Trappc6b), transcript variant X1, mRNA. (1617 bp)
db_xref="MGI:MGI:1925482" CDS 737..1099 /gene="Trappc6b" /gene_synonym="5830498C14Rik" /codon_start=1 /product="trafficking protein particle complex subunit 6B isoform X1" /protein_id="XP_036013561.1" /db_xref="GeneID:78232" /db_xref="MGI:MGI:1925482" /translation="MGFRVGQGLIERFTKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLIQLSAGKQYLEHASKYLAFTCGLIRGGLSNLGIKSIVTAEVSSMPACKFQVMIQKL" misc_feature <737..1090 /gene="Trappc6b" /gene_synonym="5830498C14Rik" /note="Trs33 subunit of the TRAPP complex; Region: TRAPPC6A_Trs33; cd14944" /db_xref="CDD:271347" ORIGIN //...
AA_position 21
Synonym: 5830498C14Rik
XM_036157668.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus ring finger protein 122 (Rnf122), transcript variant 1, mRNA. (5191 bp)
finger protein 122 homolog" /codon_start=1 /product="RING finger protein 122 isoform 1" /protein_id="NP_001355302.1" /db_xref="GeneID:68867" /db_xref="MGI:MGI:1916117" /translation="MAGRRRLLAVEEGPVGPEGCFCGLGLVSTNKSCSMPPISFQDLPLNIYMVIFGTGIFVFMLSLIFCCYFISKLRNQAQSERYGYKEVVLKGDAKKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIAGPTETSQSIGILLDELV" misc_feature 369..509 /gene="Rnf122" /gene_synonym="1110063C11Rik" /note="RING finger, H2 subclass, found in RING finger protein 122 (RNF122) and similar proteins; Region: RING-H2_RNF122; cd16676" /db_xref="CDD:438338" misc_feature order...
AA_position 113
Synonym: 1110063C11Rik
NM_001368373.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus protein prenyltransferase alpha subunit repeat containing 1 (Ptar1), mRNA. (2064 bp)
codon_start=1 /product="protein prenyltransferase alpha subunit repeat-containing protein 1" /protein_id="NP_082484.1" /db_xref="CCDS:CCDS50405.1" /db_xref="GeneID:72351" /db_xref="MGI:MGI:1921875" /translation="MAESNEEVAVLVQRVVKDITNAFRRNPHIDEIGLIPCPEARYNRSPIVLVENKLGVESWCVKFLLPYVHNKLLLYRTRKQWLNKDELADVTCTLLLLNPDFTTAWNVRKELILSGTLSPIKDLHLGKLALTKFPKSPETWIHRRWVLQQLSQETFLPSSVAKGSLGAVPAERTQRIIQEEMEVCSEAAGRYPSNYNAWSHRIWVLQNVAKLDLKILLDELSSTKHWASMHVSDHSGFHYRQFLLKSLISQTTIDSAVPQHNSLKSEPKDEAAAASTEEPSVNLPQLLEEEVEFCTDLIDSYPGHETLWCHRRHVFYLQHHLNGRLPPNLTHLSPADCPGGALNDSLQIPTSPQLSQAMEVDGLSDSSKQGYSQETKRLKRTPAPDSLG...
AA_position 84
Synonym: 1700084D09Rik; 2010013L17Rik; 4930428J16Rik
NM_028208.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus calreticulin 4 (Calr4), transcript variant 1, mRNA. (1896 bp)
GPDICGFGNNRLQVILSHKGKYHENNKTLKCRINKDTHLYTLILRPNATYEVKIDNQKVTSGGLEDDWDFLPPKKIKDPYARKPRKWDERQQIEDPDDKKPEDWEDSEFIPDPDAKKPDDWNEAMDGVWEGPLIPNVKYMGEWKPRIIDNPNYQGEWIHPEIDNPKYRPDPTIGHYHNISVLGLDLWQVKSGSIFDNFLLTNDEEFAEEVGNMTWGLRKDVEQQWRELYEEMEKQKEAEETKKKREKERARQEDVWGLDEEDEEDAEEDDEEEAEERLKQEGSAARASLDQKEAHLDQKDEL" sig_peptide 1..63 /gene="Calr4" /gene_synonym="4933403L16Rik" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 82..1011 /gene="Calr4" /gene_synonym="4933403L16Rik" /note="Calreticulin family; Region: Calreticulin; pfam00262" /db_xref="CDD:459737" exon 1..106 /gene="...
AA_position 436
Synonym: 4933403L16Rik
NM_001285895.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus RIKEN cDNA B230219D22 gene (B230219D22Rik), mRNA. (4691 bp)
B230219D22Rik" /gene_synonym="D530037I19Rik" /codon_start=1 /product="UPF0461 protein C5orf24 homolog" /protein_id="NP_851795.1" /db_xref="CCDS:CCDS26552.1" /db_xref="GeneID:78521" /db_xref="MGI:MGI:1925771" /translation="MMHPVAGSNPAFCGPGKPSCLNEDAMRAADQFDLYSSQQNKYSHTVSHKPMVCQRQDPLNETHLQPTSGRNIEIKDELKKKKNLNRSGKRGRPSGTTKSAGYRTSTGRPLGTTKAAGFKTSPGRPLGTTKAAGYKVSPGRPPGSIKALSRLADLGYGCGTAAFPYPMMHSRVVHGLQETSGEVKPPSE" misc_feature 228..791 /gene="B230219D22Rik" /gene_synonym="D530037I19Rik" /note="Family of unknown function (DUF5568); Region: DUF5568; pfam17724" /db_xref="CDD:465471" misc_feature...
AA_position 75
Synonym: D530037I19Rik
NM_181278.2 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
PREDICTED: Mus musculus glia maturation factor, beta (Gmfb), transcript variant X1, mRNA. (4186 bp)
gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /codon_start=1 /product="glia maturation factor beta isoform X1" /protein_id="XP_030103769.1" /db_xref="GeneID:63985" /db_xref="MGI:MGI:1927133" /translation="MSESLVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELEGVSPDELKDELPERQPRTFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGFFH" misc_feature 176..544 /gene="Gmfb" /gene_synonym="3110001H22Rik; 3110001O16Rik; D14Ertd630e" /note="ADF-homology domain of glia maturation factor beta and related proteins; Region: ADF_GMF-beta_like; cd11283" /db_xref="CDD...
AA_position 58
Synonym: 3110001H22Rik; 3110001O16Rik; D14Ertd630e
XM_030247909.2 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus prostaglandin D2 synthase (brain) (Ptgds), transcript variant 3, mRNA. (773 bp)
product="prostaglandin-H2 D-isomerase precursor" /protein_id="NP_001407674.1" /db_xref="GeneID:19215" /db_xref="MGI:MGI:99261" /translation="MAALRMLWMGLVLLGLLGFPQTPAQGHDTVQPNFQQDKFLGRWYSAGLASNSSWFREKKAVLYMCKTVVAPSTEGGLNLTSTFLRKNQCETKIMVLQPAGAPGHYTYSSPHSGSIHSVSVVEANYDEYALLFSRGTKGPGQDFRMATLYSRTQTLKDELKEKFTTFSKAQGLTEEDIVFLPQPDKCIQE" sig_peptide 77..148 /gene="Ptgds" /gene_synonym="21kDa; L-PGDS; PGD2; PGDS; PGDS2; Ptgs3" /inference="COORDINATES: ab initio prediction:SignalP:6.0" mat_peptide 149..643 /gene="Ptgds" /gene_synonym="21kDa; L-PGDS; PGD2; PGDS; PGDS2; Ptgs3" /product="Prostaglandin-H2 D...
AA_position 156
Synonym: 21kDa; L-PGDS; PGD2; PGDS; PGDS2; Ptgs3
NM_001420745.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus prostaglandin D2 synthase (brain) (Ptgds), transcript variant 4, mRNA. (817 bp)
product="prostaglandin-H2 D-isomerase precursor" /protein_id="NP_001407675.1" /db_xref="GeneID:19215" /db_xref="MGI:MGI:99261" /translation="MAALRMLWMGLVLLGLLGFPQTPAQGHDTVQPNFQQDKFLGRWYSAGLASNSSWFREKKAVLYMCKTVVAPSTEGGLNLTSTFLRKNQCETKIMVLQPAGAPGHYTYSSPHSGSIHSVSVVEANYDEYALLFSRGTKGPGQDFRMATLYSRTQTLKDELKEKFTTFSKAQGLTEEDIVFLPQPDKCIQE" sig_peptide 121..192 /gene="Ptgds" /gene_synonym="21kDa; L-PGDS; PGD2; PGDS; PGDS2; Ptgs3" /inference="COORDINATES: ab initio prediction:SignalP:6.0" mat_peptide 193..687 /gene="Ptgds" /gene_synonym="21kDa; L-PGDS; PGD2; PGDS; PGDS2; Ptgs3" /product="Prostaglandin-H2...
AA_position 156
Synonym: 21kDa; L-PGDS; PGD2; PGDS; PGDS2; Ptgs3
NM_001420746.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus prostaglandin D2 synthase (brain) (Ptgds), transcript variant 2, mRNA. (850 bp)
product="prostaglandin-H2 D-isomerase precursor" /protein_id="NP_001407673.1" /db_xref="GeneID:19215" /db_xref="MGI:MGI:99261" /translation="MAALRMLWMGLVLLGLLGFPQTPAQGHDTVQPNFQQDKFLGRWYSAGLASNSSWFREKKAVLYMCKTVVAPSTEGGLNLTSTFLRKNQCETKIMVLQPAGAPGHYTYSSPHSGSIHSVSVVEANYDEYALLFSRGTKGPGQDFRMATLYSRTQTLKDELKEKFTTFSKAQGLTEEDIVFLPQPDKCIQE" sig_peptide 121..192 /gene="Ptgds" /gene_synonym="21kDa; L-PGDS; PGD2; PGDS; PGDS2; Ptgs3" /inference="COORDINATES: ab initio prediction:SignalP:6.0" mat_peptide 193..687 /gene="Ptgds" /gene_synonym="21kDa; L-PGDS; PGD2; PGDS; PGDS2; Ptgs3" /product="Prostaglandin-H2...
AA_position 156
Synonym: 21kDa; L-PGDS; PGD2; PGDS; PGDS2; Ptgs3
NM_001420744.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus prostaglandin D2 synthase (brain) (Ptgds), transcript variant 1, mRNA. (805 bp)
D-isomerase precursor" /protein_id="NP_032989.2" /db_xref="CCDS:CCDS38074.1" /db_xref="GeneID:19215" /db_xref="MGI:MGI:99261" /translation="MAALRMLWMGLVLLGLLGFPQTPAQGHDTVQPNFQQDKFLGRWYSAGLASNSSWFREKKAVLYMCKTVVAPSTEGGLNLTSTFLRKNQCETKIMVLQPAGAPGHYTYSSPHSGSIHSVSVVEANYDEYALLFSRGTKGPGQDFRMATLYSRTQTLKDELKEKFTTFSKAQGLTEEDIVFLPQPDKCIQE" sig_peptide 77..148 /gene="Ptgds" /gene_synonym="21kDa; L-PGDS; PGD2; PGDS; PGDS2; Ptgs3" /inference="COORDINATES: ab initio prediction:SignalP:6.0" mat_peptide 149..643 /gene="Ptgds" /gene_synonym="21kDa; L-PGDS; PGD2; PGDS; PGDS2; Ptgs3" /product="Prostaglandin-H2 D-...
AA_position 156
Synonym: 21kDa; L-PGDS; PGD2; PGDS; PGDS2; Ptgs3
NM_008963.3 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus CWC22 spliceosome-associated protein (Cwc22), transcript variant 18, mRNA. (1889 bp)
homolog" /codon_start=1 /product="pre-mRNA-splicing factor CWC22 homolog isoform 12" /protein_id="NP_001408875.1" /db_xref="GeneID:80744" /db_xref="MGI:MGI:2136773" /translation="MKSSVAHMKSSGHNRRETHSSYRRSSSPEDRYTEQERSPRDRGYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRSRKSPSPDRSPARGGGQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGR" misc_feature 149..529 /gene="Cwc22" /gene_synonym="B230213M24; mKIAA1604" /note="propagated from UniProtKB/Swiss-Prot (Q8C5N3.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 173..>607 /gene="Cwc22" /...
AA_position 117
Synonym: B230213M24; mKIAA1604
NM_001421946.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus CWC22 spliceosome-associated protein (Cwc22), transcript variant 17, mRNA. (1892 bp)
homolog" /codon_start=1 /product="pre-mRNA-splicing factor CWC22 homolog isoform 11" /protein_id="NP_001408874.1" /db_xref="GeneID:80744" /db_xref="MGI:MGI:2136773" /translation="MKSSVAHMKQSSGHNRRETHSSYRRSSSPEDRYTEQERSPRDRGYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRSRKSPSPDRSPARGGGQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGR" misc_feature 173..>610 /gene="Cwc22" /gene_synonym="B230213M24; mKIAA1604" /note="U2 snRNP auxilliary factor, large subunit, splicing factor; Region: U2AF_lg; TIGR01642" /db_xref="CDD:273727" misc_feature 263..265 /gene="...
AA_position 118
Synonym: B230213M24; mKIAA1604
NM_001421945.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus CWC22 spliceosome-associated protein (Cwc22), transcript variant 16, mRNA. (1953 bp)
homolog" /codon_start=1 /product="pre-mRNA-splicing factor CWC22 homolog isoform 11" /protein_id="NP_001408873.1" /db_xref="GeneID:80744" /db_xref="MGI:MGI:2136773" /translation="MKSSVAHMKQSSGHNRRETHSSYRRSSSPEDRYTEQERSPRDRGYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRSRKSPSPDRSPARGGGQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGR" misc_feature 234..>671 /gene="Cwc22" /gene_synonym="B230213M24; mKIAA1604" /note="U2 snRNP auxilliary factor, large subunit, splicing factor; Region: U2AF_lg; TIGR01642" /db_xref="CDD:273727" misc_feature 324..326 /gene="...
AA_position 118
Synonym: B230213M24; mKIAA1604
NM_001421944.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus transmembrane protein 40 (Tmem40), transcript variant 3, mRNA. (1339 bp)
note="isoform b is encoded by transcript variant 3" /codon_start=1 /product="transmembrane protein 40 isoform b" /protein_id="NP_001161729.1" /db_xref="CCDS:CCDS51879.1" /db_xref="GeneID:94346" /db_xref="MGI:MGI:2137870" /translation="MEASGSSSQSQDSGGVHRETEDHYQETELHKHHGKARERYKRDKGADHGELEVLKDELQLCGGAAGEMVPTGESGLRRRGSGSAEGEVEASQLRRLNIKKDDEFFHFVLLCFAIGALLVCYHYYADWFMSLGVGLLTFASLETIGIYFGLVYRIHSVLQGFIPLLQKFRLPGFRRTN" misc_feature 440..799 /gene="Tmem40" /gene_synonym="9030407H20Rik" /note="Transmembrane protein 40 family; Region: TMEM40; pfam15817" /db_xref="CDD:464892" exon 273..404 /gene="Tmem40" /...
AA_position 78
Synonym: 9030407H20Rik
NM_001168257.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
PREDICTED: Mus musculus transmembrane protein 40 (Tmem40), transcript variant X7, mRNA. (1336 bp)
db_xref="GeneID:94346" /db_xref="MGI:MGI:2137870" CDS 332..802 /gene="Tmem40" /gene_synonym="9030407H20Rik" /codon_start=1 /product="transmembrane protein 40 isoform X5" /protein_id="XP_036008309.1" /db_xref="GeneID:94346" /db_xref="MGI:MGI:2137870" /translation="MEASGSSSQSQDSGGVHRETEDHCADHGELEVLKDELQLCGGAAGEMVPTGESGLRRRGSGSAEGEVEASQLRRLNIKKDDEFFHFVLLCFAIGALLVCYHYYADWFMSLGVGLLTFASLETIGIYFGLVYRIHSVLQGFIPLLQKFRLPGFRRTN" misc_feature 437..796 /gene="Tmem40" /gene_synonym="9030407H20Rik" /note="Transmembrane protein 40 family; Region: TMEM40; pfam15817" /db_xref="CDD:464892" ORIGIN //...
AA_position 34
Synonym: 9030407H20Rik
XM_036152416.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
PREDICTED: Mus musculus transmembrane protein 40 (Tmem40), transcript variant X6, mRNA. (1207 bp)
db_xref="GeneID:94346" /db_xref="MGI:MGI:2137870" CDS 203..673 /gene="Tmem40" /gene_synonym="9030407H20Rik" /codon_start=1 /product="transmembrane protein 40 isoform X5" /protein_id="XP_036008308.1" /db_xref="GeneID:94346" /db_xref="MGI:MGI:2137870" /translation="MEASGSSSQSQDSGGVHRETEDHCADHGELEVLKDELQLCGGAAGEMVPTGESGLRRRGSGSAEGEVEASQLRRLNIKKDDEFFHFVLLCFAIGALLVCYHYYADWFMSLGVGLLTFASLETIGIYFGLVYRIHSVLQGFIPLLQKFRLPGFRRTN" misc_feature 308..667 /gene="Tmem40" /gene_synonym="9030407H20Rik" /note="Transmembrane protein 40 family; Region: TMEM40; pfam15817" /db_xref="CDD:464892" ORIGIN //...
AA_position 34
Synonym: 9030407H20Rik
XM_036152415.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus ribosomal protein S5 (Rps5), transcript variant 1, mRNA. (893 bp)
uS7" /protein_id="NP_001404155.1" /db_xref="GeneID:20103" /db_xref="MGI:MGI:1097682" /translation="MTEWEAATPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR" misc_feature 233..235 /gene="Rps5" /note="N-acetylmethionine. /evidence=ECO:0000250|UniProtKB:P46782; propagated from UniProtKB/Swiss-Prot (P97461.4); acetylation site" misc_feature 236..238 /gene="Rps5" /note="N-acetylthreonine, in 40S ribosomal protein S5, N-terminally processed. /evidence=...
AA_position 193
NM_001417226.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/mm/aa%3aKDEL
lang : en | div : | spe : mm | query_string : aa:KDEL | format : html | download : 

0.000 | 0.000 | search_start;
0.211 | 0.211 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:KDEL)?source=Mus musculus (house mouse)?to=0&format=json
0.656 | 0.445 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:KDEL)?source=Mus musculus (house mouse)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.662 | 0.006 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]