LOCUS       XM_006528213             989 bp    mRNA    linear   ROD 10-APR-2023
DEFINITION  PREDICTED: Mus musculus claudin 34B4 (Cldn34b4), transcript variant
            X1, mRNA.
ACCESSION   XM_006528213
VERSION     XM_006528213.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006528213.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/05/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..989
                     /gene="Cldn34b4"
                     /gene_synonym="4930428D18Rik"
                     /note="claudin 34B4; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:619294"
                     /db_xref="MGI:MGI:3588232"
     CDS             289..924
                     /gene="Cldn34b4"
                     /gene_synonym="4930428D18Rik"
                     /codon_start=1
                     /product="claudin 34B4 isoform X1"
                     /protein_id="XP_006528276.1"
                     /db_xref="GeneID:619294"
                     /db_xref="MGI:MGI:3588232"
                     /translation="

MLIKNRCNSQMGGFALTTVAWLICCISIGLPQWRVWHFQDPVVFKSTTAFVGMWRVCTLQYDEDFRNMRICHQYNYHDTFLPLNIRMIQQLLLVSSFFGLVGKVTTIIALWNVCQGRVHRKATYNPFGLSGILNIISSSFICLAILINYVSIIFQEGIIFPPSFNIPSQPDTQEIGSAMALAFIAAVLFLLSGTILLTSNFPVDKPVCSKY"

     misc_feature    343..882
                     /gene="Cldn34b4"
                     /gene_synonym="4930428D18Rik"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:451326"
ORIGIN      

gggtcaggactgtagtctgcccaagactttgggacaaactggatccattcaggagtcctaaagaaacgtgagaagagtgtgagaggagtggtgagtggtgtaagagaggaacagagtgtccttggtcctggtagcccaactaaccacctgttctgaaccactgatagtcactagttcacttgaggacccactaaagttgctgtattgcacatagccaatgtgaaggaaattataaagaaggtgaaaactaagtttgctgcaggttgctgaatattcactgtgatcatcatgttaatcaaaaaccgttgcaatagccaaatgggaggctttgctttgacaactgtggcttggctaatttgctgtatctccataggcttacctcagtggcgtgtgtggcacttccaagaccctgtggtctttaagtctaccacagcatttgttggcatgtggagagtctgtactctccagtatgatgaggactttaggaatatgagaatatgtcaccaatacaactaccatgataccttccttccattgaatatcagaatgatccaacaattgctactggtctctagcttttttggactggttggaaaagtcaccaccattattgccctttggaatgtgtgtcaggggagagtacatagaaaggccacttacaatccatttggtctatctggaattctgaacatcatttctagcagctttatttgccttgccatattgattaattatgtatctatcatattccaggagggtataatatttccaccatctttcaatataccttcccagccagacactcaggaaattggaagtgccatggccttggcatttatagctgcagttttatttctattaagtggcacaattttgcttacttcaaattttcctgtagacaagccagtatgttctaaatattaaaagtaaatttctactttacataacattcaaaatccaaagttatctgtaatgaaggaatgtgtcta

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