LOCUS       NR_002871               1453 bp    RNA     linear   ROD 05-AUG-2023
DEFINITION  Mus musculus ventral anterior homeobox 2, opposite strand (Vax2os),
            transcript variant 2, long non-coding RNA.
ACCESSION   NR_002871
VERSION     NR_002871.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1453)
  AUTHORS   Lo Giudice Q, Leleu M, La Manno G and Fabre PJ.
  TITLE     Single-cell transcriptional logic of cell-fate specification and
            axon guidance in early-born retinal neurons
  JOURNAL   Development 146 (17) (2019)
   PUBMED   31399471
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1453)
  AUTHORS   Meola N, Pizzo M, Alfano G, Surace EM and Banfi S.
  TITLE     The long noncoding RNA Vax2os1 controls the cell cycle progression
            of photoreceptor progenitors in the mouse retina
  JOURNAL   RNA 18 (1), 111-123 (2012)
   PUBMED   22128341
  REMARK    GeneRIF: Vax2os1 is proposed to be the first example of lncRNA that
            acts as a cell cycle regulator in the mammalian retina during
            development.
REFERENCE   3  (bases 1 to 1453)
  AUTHORS   Alfano G, Vitiello C, Caccioppoli C, Caramico T, Carola A, Szego
            MJ, McInnes RR, Auricchio A and Banfi S.
  TITLE     Natural antisense transcripts associated with genes involved in eye
            development
  JOURNAL   Hum Mol Genet 14 (7), 913-923 (2005)
   PUBMED   15703187
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BK005211.1 and BE988529.1.
            
            On Feb 17, 2018 this sequence version replaced NR_002871.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BK005211.1 [ECO:0000332]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1435              BK005211.1         1-1435
            1436-1453           BE988529.1         1-18                c
FEATURES             Location/Qualifiers
     source          1..1453
                     /organism="Mus musculus"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 35.94 cM"
     gene            1..1453
                     /gene="Vax2os"
                     /gene_synonym="Vas2os; Vax2os1; Vax2os2"
                     /note="ventral anterior homeobox 2, opposite strand"
                     /db_xref="GeneID:574519"
                     /db_xref="MGI:MGI:3583301"
     ncRNA           1..1453
                     /ncRNA_class="lncRNA"
                     /gene="Vax2os"
                     /gene_synonym="Vas2os; Vax2os1; Vax2os2"
                     /product="ventral anterior homeobox 2, opposite strand,
                     transcript variant 2"
                     /db_xref="GeneID:574519"
                     /db_xref="MGI:MGI:3583301"
     exon            1..99
                     /gene="Vax2os"
                     /gene_synonym="Vas2os; Vax2os1; Vax2os2"
                     /inference="alignment:Splign:2.1.0"
     exon            100..191
                     /gene="Vax2os"
                     /gene_synonym="Vas2os; Vax2os1; Vax2os2"
                     /inference="alignment:Splign:2.1.0"
     exon            192..280
                     /gene="Vax2os"
                     /gene_synonym="Vas2os; Vax2os1; Vax2os2"
                     /inference="alignment:Splign:2.1.0"
     exon            281..652
                     /gene="Vax2os"
                     /gene_synonym="Vas2os; Vax2os1; Vax2os2"
                     /inference="alignment:Splign:2.1.0"
     exon            653..774
                     /gene="Vax2os"
                     /gene_synonym="Vas2os; Vax2os1; Vax2os2"
                     /inference="alignment:Splign:2.1.0"
     exon            775..1437
                     /gene="Vax2os"
                     /gene_synonym="Vas2os; Vax2os1; Vax2os2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

aaagcgtcggccaggccaggcggccaggccaggcggaggagcgccggagccggcggtatccaagcgagtgggaaaactggagcagcggagccgcggcagggaaatgcacctagctttcagtctggctccgcttgatggaaaactcagagctcgaggaggcgaccctgactcgacccggcagaaaagaggaggtttccatgtcgctcaggctggcccccatactatatagctttaaaatgctgaccctccagtttccacctcctaagtgctaggattacagcctgtagggtccattaatgcattccacatactcctgagtgtggagccatctggtggggcatggccatcttacaagggagaacactcttaaagaaagctgactcttctccactagcgactgtcaactatgaatacatcctcagctagcggtgagggctgtgagcctctcctgggtccatgctggaatgctggctctcctgggtccatgctggaatgctggctctcctgggtccatgctggaatgctggctctcctgggtccatgctggaatgctggctctcctgggtccatgctggaatgctggctctcctgggtccatgctggaatgctggctggctggtcttgtgctgggcagagctgctgtgagtttgagttccagaggatagaggataccagtctatcacggagctgaaacagcagacacagcagcaggaactggacgctgagaacggatatcctttaccataagcacagagcagaaagagccagctgcaagcggcagcggagaaataacctatcagatggtgctgaaacccgggagaagttaagtccccagcgcgatggttttggtctttcctggccacgtgggaaccacttctgtccctctctcttctctgctggatacatcatttcttcggactcacgagtacccatccctagatatcctgactatccaggtccaggaccctctgagctctttgctgagttgcggccccgacagagttagccccatccgaacaaagaccaggcctttgttttgggggaacccctgatatagagacttcttatctgaggttaccgcccccacataaaccgttgggtcgatctcagactatacattgggatgacaattcaacagtattgagatctctggcaaacgttgggaagatgggtgtcacaggatctaaaacaaaaatgtattcctacgtccagtttttgggaagctgcgctctcctaatctcccttcactgcattgagcacagggctccaggagccgcctagccactcccacctctcatccccatctccttcccgtcctcctgtggctccgttgtcagtggcggcagcagcagcaccagcggttgtgatgactaagggtggcgaggcacccatgttcccagaagtaattccaaataaactcctttgttcaccaaggtaaaaaaaaaaaaaaaaa

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