ver.2
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Previous release (v1)
2024-11-21 21:40:33, GGRNA : RefSeq release 226 (Sep, 2024)
Summary:
Results:
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Overlapping matches are dark colored.
LOCUS XR_381516 3866 bp RNA linear ROD 07-FEB-2024 DEFINITION PREDICTED: Mus musculus nrde-2 necessary for RNA interference, domain containing (Nrde2), transcript variant X2, misc_RNA. ACCESSION XR_381516 VERSION XR_381516.5 DBLINK BioProject: PRJNA169 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is...
LOCUS NR_165261 3932 bp RNA linear ROD 22-SEP-2023 DEFINITION Mus musculus nrde-2 necessary for RNA interference, domain containing (Nrde2), transcript variant 5, non-coding RNA. ACCESSION NR_165261 XR_001780446 VERSION NR_165261.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was...
LOCUS NR_165260 3705 bp RNA linear ROD 22-SEP-2023 DEFINITION Mus musculus nrde-2 necessary for RNA interference, domain containing (Nrde2), transcript variant 4, non-coding RNA. ACCESSION NR_165260 XR_381517 VERSION NR_165260.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was...
LOCUS XM_011244093 4905 bp mRNA linear ROD 07-FEB-2024 DEFINITION PREDICTED: Mus musculus nrde-2 necessary for RNA interference, domain containing (Nrde2), transcript variant X1, mRNA. ACCESSION XM_011244093 VERSION XM_011244093.4 DBLINK BioProject: PRJNA169 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record...
LOCUS NM_001377383 3562 bp mRNA linear ROD 09-JUN-2024 DEFINITION Mus musculus nrde-2 necessary for RNA interference, domain containing (Nrde2), transcript variant 3, mRNA. ACCESSION NM_001377383 VERSION NM_001377383.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from...
LOCUS NM_183155 3710 bp mRNA linear ROD 03-JUN-2024 DEFINITION Mus musculus nrde-2 necessary for RNA interference, domain containing (Nrde2), transcript variant 2, mRNA. ACCESSION NM_183155 XM_484171 XM_912077 VERSION NM_183155.3 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was...
LOCUS NM_001290303 3725 bp mRNA linear ROD 05-JUN-2024 DEFINITION Mus musculus nrde-2 necessary for RNA interference, domain containing (Nrde2), transcript variant 1, mRNA. ACCESSION NM_001290303 XM_006515732 VERSION NM_001290303.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference...
of Prdm13, a dorsomedial hypothalamus-enriched gene, mimics age-associated changes in sleep quality and adiposity JOURNAL Aging Cell 14 (2), 209-218 (2015) PUBMED 25546159 REFERENCE 2 (bases 1 to 1306) AUTHORS Zhou,C., Zhang,P., Xu,G.C., Wu,D.M., Liu,R.Y., Zeng,Q. and Wang,C.T. TITLE RNA interference of Biot2 induces G1 phase arrest and apoptosis in mouse colorectal cancer cell line JOURNAL Oncol Res 22 (2), 93-103 (2015) PUBMED 25706396 REMARK GeneRIF: silencing Biot2 in CT26 cells by RNA interference can inhibit cell growth in vitro and in vivo. REFERENCE 3 (bases 1 to 1306) AUTHORS Satoh,A...
Synonym: 100042659; 4930517G15Rik; 4930540C21Rik; Biot2; Ccdc7; Gm3952
NM_001197041.1 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
of Prdm13, a dorsomedial hypothalamus-enriched gene, mimics age-associated changes in sleep quality and adiposity JOURNAL Aging Cell 14 (2), 209-218 (2015) PUBMED 25546159 REFERENCE 2 (bases 1 to 1522) AUTHORS Zhou,C., Zhang,P., Xu,G.C., Wu,D.M., Liu,R.Y., Zeng,Q. and Wang,C.T. TITLE RNA interference of Biot2 induces G1 phase arrest and apoptosis in mouse colorectal cancer cell line JOURNAL Oncol Res 22 (2), 93-103 (2015) PUBMED 25706396 REMARK GeneRIF: silencing Biot2 in CT26 cells by RNA interference can inhibit cell growth in vitro and in vivo. REFERENCE 3 (bases 1 to 1522) AUTHORS Satoh,A...
Synonym: 100042659; 4930517G15Rik; 4930540C21Rik; Biot2; Ccdc7; Gm3952
NM_029061.3 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
synonym="A130099G21; GCF2; Tcf9" /inference="alignment:Splign:2.1.0" exon 1600..2197 /gene="Gcfc2" /gene_synonym="A130099G21; GCF2; Tcf9" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 2197) AUTHORS Ma Y, Ren Y and Guan J. TITLE Knockdown of GC binding factor 2 by RNA interference inhibits invasion and migration of vascular smooth muscle cells JOURNAL Mol Med Rep 20 (2), 1781-1789 (2019) PUBMED 31257544 REMARK GeneRIF: The inhibition of vascular smooth muscle cells proliferation and migration by knockdown of GCF2 by RNA interference was mediated by the PI3K/AKT signaling...
synonym="A130099G21; GCF2; Tcf9" /inference="alignment:Splign:2.1.0" exon 1597..2194 /gene="Gcfc2" /gene_synonym="A130099G21; GCF2; Tcf9" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 2194) AUTHORS Ma Y, Ren Y and Guan J. TITLE Knockdown of GC binding factor 2 by RNA interference inhibits invasion and migration of vascular smooth muscle cells JOURNAL Mol Med Rep 20 (2), 1781-1789 (2019) PUBMED 31257544 REMARK GeneRIF: The inhibition of vascular smooth muscle cells proliferation and migration by knockdown of GCF2 by RNA interference was mediated by the PI3K/AKT signaling...
PUBMED 34321999 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 4063) AUTHORS Tejedor,G., Laplace-Builhe,B., Luz-Crawford,P., Assou,S., Barthelaix,A., Mathieu,M., Kissa,K., Jorgensen,C., Collignon,J., Chuchana,P. and Djouad,F. TITLE Whole embryo culture, transcriptomics and RNA interference identify TBX1 and FGF11 as novel regulators of limb development in the mouse JOURNAL Sci Rep 10 (1), 3597 (2020) PUBMED 32107392 REMARK GeneRIF: Whole embryo culture, transcriptomics and RNA interference identify TBX1 and FGF11 as novel regulators of limb development in the mouse. Publication...
sequence was derived from CJ130124.1, AK080954.1, CV559803.1, AL606976.25 and AI451331.1. On Nov 19, 2015 this sequence version replaced XM_006503067.1. Summary: This gene encodes a member of the argonaute family of proteins, which associate with small RNAs and have important roles in RNA interference (RNAi) and RNA silencing. This protein binds to microRNAs (miRNAs) or small interfering RNAs (siRNAs) and represses translation of mRNAs that are complementary to them. It is also involved in transcriptional gene silencing (TGS) of promoter regions that are complementary to bound short antigene...
synonym="A130099G21; GCF2; Tcf9" /inference="alignment:Splign:2.1.0" exon 2132..3271 /gene="Gcfc2" /gene_synonym="A130099G21; GCF2; Tcf9" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 3271) AUTHORS Ma Y, Ren Y and Guan J. TITLE Knockdown of GC binding factor 2 by RNA interference inhibits invasion and migration of vascular smooth muscle cells JOURNAL Mol Med Rep 20 (2), 1781-1789 (2019) PUBMED 31257544 REMARK GeneRIF: The inhibition of vascular smooth muscle cells proliferation and migration by knockdown of GCF2 by RNA interference was mediated by the PI3K/AKT signaling...
synonym="A130099G21; GCF2; Tcf9" /inference="alignment:Splign:2.1.0" exon 2135..3274 /gene="Gcfc2" /gene_synonym="A130099G21; GCF2; Tcf9" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 3274) AUTHORS Ma Y, Ren Y and Guan J. TITLE Knockdown of GC binding factor 2 by RNA interference inhibits invasion and migration of vascular smooth muscle cells JOURNAL Mol Med Rep 20 (2), 1781-1789 (2019) PUBMED 31257544 REMARK GeneRIF: The inhibition of vascular smooth muscle cells proliferation and migration by knockdown of GCF2 by RNA interference was mediated by the PI3K/AKT signaling...
PUBMED 34321999 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 3489) AUTHORS Tejedor,G., Laplace-Builhe,B., Luz-Crawford,P., Assou,S., Barthelaix,A., Mathieu,M., Kissa,K., Jorgensen,C., Collignon,J., Chuchana,P. and Djouad,F. TITLE Whole embryo culture, transcriptomics and RNA interference identify TBX1 and FGF11 as novel regulators of limb development in the mouse JOURNAL Sci Rep 10 (1), 3597 (2020) PUBMED 32107392 REMARK GeneRIF: Whole embryo culture, transcriptomics and RNA interference identify TBX1 and FGF11 as novel regulators of limb development in the mouse. Publication...
PUBMED 34321999 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 3098) AUTHORS Tejedor,G., Laplace-Builhe,B., Luz-Crawford,P., Assou,S., Barthelaix,A., Mathieu,M., Kissa,K., Jorgensen,C., Collignon,J., Chuchana,P. and Djouad,F. TITLE Whole embryo culture, transcriptomics and RNA interference identify TBX1 and FGF11 as novel regulators of limb development in the mouse JOURNAL Sci Rep 10 (1), 3597 (2020) PUBMED 32107392 REMARK GeneRIF: Whole embryo culture, transcriptomics and RNA interference identify TBX1 and FGF11 as novel regulators of limb development in the mouse. Publication...
synonym="A130099G21; GCF2; Tcf9" /inference="alignment:Splign:2.1.0" exon 2211..3350 /gene="Gcfc2" /gene_synonym="A130099G21; GCF2; Tcf9" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 3350) AUTHORS Ma Y, Ren Y and Guan J. TITLE Knockdown of GC binding factor 2 by RNA interference inhibits invasion and migration of vascular smooth muscle cells JOURNAL Mol Med Rep 20 (2), 1781-1789 (2019) PUBMED 31257544 REMARK GeneRIF: The inhibition of vascular smooth muscle cells proliferation and migration by knockdown of GCF2 by RNA interference was mediated by the PI3K/AKT signaling...
record has been curated by NCBI staff. The reference sequence was derived from CJ130124.1, BC129914.1, AK080954.1, CV559803.1, AL606976.25 and AI451331.1. Summary: This gene encodes a member of the argonaute family of proteins, which associate with small RNAs and have important roles in RNA interference (RNAi) and RNA silencing. This protein binds to microRNAs (miRNAs) or small interfering RNAs (siRNAs) and represses translation of mRNAs that are complementary to them. It is also involved in transcriptional gene silencing (TGS) of promoter regions that are complementary to bound short antigene...
PUBMED 34321999 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 3182) AUTHORS Tejedor,G., Laplace-Builhe,B., Luz-Crawford,P., Assou,S., Barthelaix,A., Mathieu,M., Kissa,K., Jorgensen,C., Collignon,J., Chuchana,P. and Djouad,F. TITLE Whole embryo culture, transcriptomics and RNA interference identify TBX1 and FGF11 as novel regulators of limb development in the mouse JOURNAL Sci Rep 10 (1), 3597 (2020) PUBMED 32107392 REMARK GeneRIF: Whole embryo culture, transcriptomics and RNA interference identify TBX1 and FGF11 as novel regulators of limb development in the mouse. Publication...
PUBMED 34321999 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 3467) AUTHORS Tejedor,G., Laplace-Builhe,B., Luz-Crawford,P., Assou,S., Barthelaix,A., Mathieu,M., Kissa,K., Jorgensen,C., Collignon,J., Chuchana,P. and Djouad,F. TITLE Whole embryo culture, transcriptomics and RNA interference identify TBX1 and FGF11 as novel regulators of limb development in the mouse JOURNAL Sci Rep 10 (1), 3597 (2020) PUBMED 32107392 REMARK GeneRIF: Whole embryo culture, transcriptomics and RNA interference identify TBX1 and FGF11 as novel regulators of limb development in the mouse. Publication...
synonym="A130099G21; GCF2; Tcf9" /inference="alignment:Splign:2.1.0" exon 2441..3580 /gene="Gcfc2" /gene_synonym="A130099G21; GCF2; Tcf9" /inference="alignment:Splign:2.1.0" ORIGIN // REFERENCE 1 (bases 1 to 3580) AUTHORS Ma Y, Ren Y and Guan J. TITLE Knockdown of GC binding factor 2 by RNA interference inhibits invasion and migration of vascular smooth muscle cells JOURNAL Mol Med Rep 20 (2), 1781-1789 (2019) PUBMED 31257544 REMARK GeneRIF: The inhibition of vascular smooth muscle cells proliferation and migration by knockdown of GCF2 by RNA interference was mediated by the PI3K/AKT signaling...
curated by NCBI staff. The reference sequence was derived from AL606935.8 and AL606976.25. On Mar 12, 2020 this sequence version replaced XM_011240520.2. Summary: This gene encodes a member of the argonaute family of proteins, which associate with small RNAs and have important roles in RNA interference (RNAi) and RNA silencing. This protein binds to microRNAs (miRNAs) or small interfering RNAs (siRNAs) and represses translation of mRNAs that are complementary to them. It is also involved in transcriptional gene silencing (TGS) of promoter regions that are complementary to bound short antigene...
was derived from CJ130124.1, BC129914.1, AK080954.1, CV559803.1, AL606976.25 and AI451331.1. On Nov 19, 2015 this sequence version replaced NM_153403.2. Summary: This gene encodes a member of the argonaute family of proteins, which associate with small RNAs and have important roles in RNA interference (RNAi) and RNA silencing. This protein binds to microRNAs (miRNAs) or small interfering RNAs (siRNAs) and represses translation of mRNAs that are complementary to them. It is also involved in transcriptional gene silencing (TGS) of promoter regions that are complementary to bound short antigene...
PUBMED 34321999 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 655) AUTHORS McJunkin,K., Mazurek,A., Premsrirut,P.K., Zuber,J., Dow,L.E., Simon,J., Stillman,B. and Lowe,S.W. TITLE Reversible suppression of an essential gene in adult mice using transgenic RNA interference JOURNAL Proc Natl Acad Sci U S A 108 (17), 7113-7118 (2011) PUBMED 21482754...
gene="Gcfc2" /gene_synonym="A130099G21; GCF2; Tcf9" /note="major polyA site" polyA_site 3360 /gene="Gcfc2" /gene_synonym="A130099G21; GCF2; Tcf9" /note="major polyA site" ORIGIN // REFERENCE 1 (bases 1 to 3360) AUTHORS Ma,Y., Ren,Y. and Guan,J. TITLE Knockdown of GC binding factor 2 by RNA interference inhibits invasion and migration of vascular smooth muscle cells JOURNAL Mol Med Rep 20 (2), 1781-1789 (2019) PUBMED 31257544 REMARK GeneRIF: The inhibition of vascular smooth muscle cells proliferation and migration by knockdown of GCF2 by RNA interference was mediated by the PI3K/AKT signaling...
and spatially connecting this regulator of RNAi with the basal translation machinery. REFERENCE 9 (bases 1 to 5067) AUTHORS Hong,J., Qian,Z., Shen,S., Min,T., Tan,C., Xu,J., Zhao,Y. and Huang,W. TITLE High doses of siRNAs induce eri-1 and adar-1 gene expression and reduce the efficiency of RNA interference in the mouse JOURNAL Biochem J 390 (Pt 3), 675-679 (2005) PUBMED 16004606 REMARK GeneRIF: The roles of meri-1 (mouse enhanced RNAi) and adar1 in the regulation of RNA interference are reported....
of Prdm13, a dorsomedial hypothalamus-enriched gene, mimics age-associated changes in sleep quality and adiposity JOURNAL Aging Cell 14 (2), 209-218 (2015) PUBMED 25546159 REFERENCE 2 (bases 1 to 5786) AUTHORS Zhou,C., Zhang,P., Xu,G.C., Wu,D.M., Liu,R.Y., Zeng,Q. and Wang,C.T. TITLE RNA interference of Biot2 induces G1 phase arrest and apoptosis in mouse colorectal cancer cell line JOURNAL Oncol Res 22 (2), 93-103 (2015) PUBMED 25706396 REMARK GeneRIF: silencing Biot2 in CT26 cells by RNA interference can inhibit cell growth in vitro and in vivo. REFERENCE 3 (bases 1 to 5786) AUTHORS Satoh,A...
Synonym: 100042659; 4930517G15Rik; 4930540C21Rik; Biot2; Ccdc7; Gm3952
NM_001395237.1 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 4872) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5257) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5022) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5210) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5178) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5560) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5206) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5209) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5231) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5228) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5613) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
misc_feature 638..979 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(773..775,818..820,860..862,872..874,926..928, 947..949,953..955) /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="nucleic acid-binding interface [nucleotide binding]; other site...
misc_feature 669..1010 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(804..806,849..851,891..893,903..905,957..959, 978..980,984..986) /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="nucleic acid-binding interface [nucleotide binding]; other site...
misc_feature 1074..1415 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1209..1211,1254..1256,1296..1298,1308..1310, 1362..1364,1383..1385,1389..1391) /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="nucleic acid-binding interface [nucleotide...
synonym="1700095N21Rik; 8230401J17Rik; ALMalpha; AMSH-FP" /note="hexamer: AATAAA" polyA_site 1327 /gene="Stambpl1" /gene_synonym="1700095N21Rik; 8230401J17Rik; ALMalpha; AMSH-FP" /note="major polyA site" ORIGIN // REFERENCE 1 (bases 1 to 1332) AUTHORS Lavorgna,A. and Harhaj,E.W. TITLE An RNA interference screen identifies the Deubiquitinase STAMBPL1 as a critical regulator of human T-cell leukemia virus type 1 tax nuclear export and NF-kappaB activation JOURNAL J Virol 86 (6), 3357-3369 (2012) PUBMED 22258247 REMARK Erratum:[J Virol. 2012 May;86(9):5409] REFERENCE 2 (bases 1 to 1332) AUTHORS...
Synonym: 1700095N21Rik; 8230401J17Rik; ALMalpha; AMSH-FP
NM_001360720.1 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1041..1403 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1197..1199,1242..1244,1284..1286,1296..1298, 1350..1352,1371..1373,1377..1379) /gene="Ago1" /gene_synonym="Eif2c1" /note="nucleic acid...
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5098) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1032..1394 /gene="Ago4" /gene_synonym="5730550L01Rik; Eif2c4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1188..1190,1233..1235,1275..1277,1287..1289, 1341..1343,1362..1364,1368..1370) /gene="Ago4" /gene_synonym="5730550L01Rik; Eif2c4" /note...
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5098) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
Sox2 Publication Status: Online-Only REFERENCE 7 (bases 1 to 3006) AUTHORS Gruber,J.J., Zatechka,D.S., Sabin,L.R., Yong,J., Lum,J.J., Kong,M., Zong,W.X., Zhang,Z., Lau,C.K., Rawlings,J., Cherry,S., Ihle,J.N., Dreyfuss,G. and Thompson,C.B. TITLE Ars2 links the nuclear cap-binding complex to RNA interference and cell proliferation JOURNAL Cell 138 (2), 328-339 (2009) PUBMED 19632182 REMARK GeneRIF: These findings provide evidence for a role for Ars2 in RNA interference regulation during cell proliferation. REFERENCE 8 (bases 1 to 3006) AUTHORS Wilson,M.D., Wang,D., Wagner,R., Breyssens,H.,...
Synonym: 2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B; ASR2C; ASR2D
NM_001109910.1 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
Sox2 Publication Status: Online-Only REFERENCE 7 (bases 1 to 3018) AUTHORS Gruber,J.J., Zatechka,D.S., Sabin,L.R., Yong,J., Lum,J.J., Kong,M., Zong,W.X., Zhang,Z., Lau,C.K., Rawlings,J., Cherry,S., Ihle,J.N., Dreyfuss,G. and Thompson,C.B. TITLE Ars2 links the nuclear cap-binding complex to RNA interference and cell proliferation JOURNAL Cell 138 (2), 328-339 (2009) PUBMED 19632182 REMARK GeneRIF: These findings provide evidence for a role for Ars2 in RNA interference regulation during cell proliferation. REFERENCE 8 (bases 1 to 3018) AUTHORS Wilson,M.D., Wang,D., Wagner,R., Breyssens,H.,...
Synonym: 2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B; ASR2C; ASR2D
NM_001109909.1 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
M. and Funato,H. TITLE Kinase signalling in excitatory neurons regulates sleep quantity and depth JOURNAL Nature 612 (7940), 512-518 (2022) PUBMED 36477539 REFERENCE 5 (bases 1 to 5097) AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V. and Kulkarni,O.P. TITLE HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting NALP3 expression in a mouse model of oxalate nephropathy JOURNAL Int Immunopharmacol 112, 109264 (2022) PUBMED 36183679 REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by upregulating KLF2 and inhibiting...
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0.076 | 0.076 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:RNA+interference)%7C(nt:RNA+interference)%7C(aa:RNA+interference))?source=Mus musculus (house mouse)?to=0&format=json
0.179 | 0.103 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:RNA+interference)%7C(nt:RNA+interference)%7C(aa:RNA+interference))?source=Mus musculus (house mouse)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.185 | 0.005 | cgi_end;
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Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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