GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2024-11-15 17:54:36, GGRNA : RefSeq release 226 (Sep, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

PREDICTED: Saccostrea cucullata uncharacterized LOC134279535 (LOC134279535), ncRNA. (2353 bp)
aaaagtaggtcactgtgacctacttttagaattttgcaggcatatgttttcaaattgcttaaaaggcatattttgattaccttcagaccagcgatcatcaaacttggtcagctgatgcatcttgggactctgaaaaatgtcgaccaaaatgtaggtcaccgtgacctactttcgacattttatggctatatttcagtatcttaggtatttattggcttagaatcatcaaactttgtgagttgatgcatcttgggttttcggagagtgacgaccaaaaattaggtcacggtgacctacttt...cctcttgggttttcagataatgtcgaccaaaaagtaggtcacagtgacctacttttgaatatctcaggtatttattggtttagaattatcaaacttggtcagcagatgcatcttaggcctctgataaatgtcaaccaaaatgtaggtcatggtgacctacttttgaatatatcaggtatttattggtttagaatcatcaaactttgtcagttgatgcatcttgggttttcggaaaatgtcgaccataaagtaggtcacgatgacctacttttgacattttatggctatattcaagtatct...
position 514 660 806 1080 1444 1552
XR_009994669.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Saccostrea cucullata uncharacterized LOC134247047 (LOC134247047), ncRNA. (2595 bp)
tgtcgaccaaaatgtaggtcaccgtgacctactttcgacattttatggctatatttcagtatcttaggtatttattggcttagaatcattaaactttgtgagttgatgcatcttgggttttcggagagtgacgaccaaaaattaggtcactgtgacctactttcaagatgttatggctatatttatgtatctccagtacttatcggcttagaatcatcaaactttgtgagttgatgcatcttgggttttcggagagtgacgaccaaaaattaggtcacggtgacctactttcagtatgtt...cctcttgggttttcagagaatgtcgaccaaaaagtaggtcacagtgacctacttttgaatatctcaggtatttattggtttagaattatcaaacttggtcagcagatgcatcttaggcctctgataaatgtcaaccaaaatgtaggtcatggtgacctacttttgaatatatcaggtatttattggtttagaatcatcaaactttgtcagttgatgcatcttgggttttcggaaaatgtcgaccataaagtaggtcacgatgacctacttttgacattttatggctatattcaagtatct...
position 522 668 814 1216 1580 1688
XR_009987758.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Saccostrea cucullata uncharacterized LOC134250987 (LOC134250987), ncRNA. (1178 bp)
acctaaaatacttaaatatagccatacaatgtcgaaagtaggtcatcgtgacctacattttagtcaacatttttcagagtcccaagatgcatctgctgactaagtttgataattctaagccaataaatacctgagatattcaaaagtaggtcactgtgacctactctttagtcaacattctcagaaaactcaagatgcat...accagggatacttaaatatagccatacaatgtcgaaagtaggtcattgtgacctacattttggttgacattttttagagtcccaagatgcatctgctgaccaagtttgataattctaagccaataaatacctgagatattcaaaagtaggtcaccatgacctactcttaggtcgacattctccgaaaaccaaagatgcat...agccataaaatgtcaaaagtaggtcaccgtgacctacattttggtcgacatttttcagggtcccaagatgcatctcttgaccaagtttgatgatcgtaggtttgaaggtaatcaaaatatgccttttaaacaatttgaaaacaaatgcctgcaaaattctaaaagtaggtcacagtgacctacttttt
position 282 390 518 626 755 1157
XR_009988638.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125683587 (LOC125683587), ncRNA. (2779 bp)
tttataaaaaaaaaaaaaaaaaagtaggtcacagtgacctacttttttaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagtcttcggtttgtgtcgaccaaagagtaggtcaccgtgaccttcttttggtatttgacagctaaattactatatttcagacactatttgacctataatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtcaacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttatatatttcagatactgtttgacctacagtcatcaaactttgtcagttgatgcgtcttgcatgttcaaagggtgttcaccaaaaagtaggtcaccatgacctacttttggaattggacggctatatt...
position 1318 1464 1623 1902 2030 2158 2541
XR_008802991.1 - Ostrea edulis - NCBI
PREDICTED: Saccostrea cucullata uncharacterized LOC134232134 (LOC134232134), ncRNA. (2512 bp)
ctaagccaataagtatttgagatttttaaaagtaggtcaccatgacctactttttggtcgacaatctctaaaaaccaaagatgcatcaacaaacaaagttaaaccagttagtaccgtagatacttaaagaaagcctgaaatgtccaaaaattaggtcaccgtgacctactttttggacatcattctcccaaaacccaaag...cttaaataaagccataaaatgtcgaaagtaggtcacagtgacctactttttggacatcattctcggaaaacccaagattcatcaacttataaagtttgatgattctaagccaataagtactgtagatacttaaataaagccataaaatgtcaaaaataggtcaccttgacctactttttggtcgtcactctccgaaaacc...cctgcaaaattcaaaaagtaggtcacagtgacctactttttcataattatgttttaaggtcccaagatgcatcaatttacaagatttgatgattctaaacctctcagtgtctgaaataattgggattaaattttttaaaaagaattagtcataaaattcaaaaagtaggtcatggtgacctacttttaagctgacgttgt...
position 93 669 788 1173 1851
XR_009984715.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Saccostrea cucullata lathosterol oxidase-like (LOC134250441), mRNA. (2631 bp)
aacaatgtcaacttaaaattaggtcatcgtgacctactttttgaactttatgacttatctttttaaaaacattaaatctcattattttagacactgggaggtttagaatcatcaaatcttgtactttgatgcatcttgggaccttaaaacatatttatgaaaaagtaggtcactgtgacctactttttgaattttgccaa...tgggtctttgaaaaatgttgaccaaaatataggtcacgatgacctactttcgacattttatggctatatttaagtatcttaggtatttggcttagaatcatcaaactttgtgagtcgatgcttatttgattttcggagagtgatgactaaaaagtaggtcacggtgacctacttttgacattttatggctttatttaagt...gggttttcggagagtgacgaccaaaaagtaggtcatggtgacctacttttgacattttgtggctataattaagtatctctggtacttattgacctaaaatcatctaactttgtcagttgatgtatcttgggttttcggagattgttgaccaaaaagtaggtcacagtgacctacttttgacattttatggctatatttaa...
position 1759 1905 2051 2176 2304 2432
XM_062732808.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Saccostrea cucullata uncharacterized LOC134266980 (LOC134266980), ncRNA. (3381 bp)
catcatgttaactcaaaagtaggtcacggtgacctacttttttaattttgcgggcatttgttttcaaattgatttgaaggcatattttggatactttaaggcctatgatcatcaaactttgttagttgatgcatcttgggtccttgaacaaggtcaacttaaaagtaggtcaccttgacctactttttgaactttatgac...gggactcagaaaaatgtcaaccaaaatgtaggtcactgtgacctaatttcgacattttatggctgtatttcagtatcttaggtatttattggcttagaatcatcaaactttgttagttgatgcatcttgggttttcggagagtgacgaccaaaaattaggtcatggtgacctactttcaatattttatggctatatttat...tatgcctcttgggttttcagagaatgtcgaccaaaaagtaggtcacagtgacctacttttgaatatctcaggtatttattggcttagaattatcaaactttgtcagcagatgcatcttaggcctcagaaaaatgtcaaccaaaatgtaggtcacgatgacctacttttgacattaaatggctatatttaagtatctccgg...
position 1255 1401 1547 1821 2077 2185 2533
XR_009992073.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Saccostrea cucullata DNA repair protein RAD51 homolog 4-like (LOC134231744), mRNA. (2941 bp)
catcatgttaactcaaaagtaggtcacggtgacctactttttaaattttgcggggatttgttttcaaattgatttgaaggcatattttggacactttaaggcctatgatcatcaaactttgtcagttgatgcatcttgggtccttgaacaatgtcaacttaaaagtaggtcactgtgacctactttttgaactttatgac...gggtctttgaaaaatgttaaccaaaatgtaggtcacgatgacctactttcgacattttatggctatatttcagtatcttaggcatttattggcttagaatcatcaaactttgtgagtggatgcatatttagttttcggagagtgatgaccaaaaattaggtcatggtgacctacttttgacattttatggctttatttaa...gggttttcggagagtgacgaccaaaaagtaggtcatagtgacctacttttgacattttgtggctataattaagtatctctggtacttattgacctaaaatcatcaaactttgtcagatgatgcatcttgggttttcggagaatgtcgaccaaaaagtaggtcacagtgacctacttttgaatatctcaggtacgtattag...
position 1743 1889 2181 2309 2693 2821
XM_062713707.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Saccostrea echinata uncharacterized LOC133190573 (LOC133190573), mRNA. (3656 bp)
ggtcctcggagtaagtcaactgaaaagtaggtcaccgtgacctacttttgaaaatttatggctttaattaaatatttttcaggtattaattggcttagaatcatcaaactttgtcagttgatgcatcttgggtccttggagtatgacaactgaaaggtaggtcaccttgacctacttttgaaattttatggctgtattta...tcttgggtcttcggagtaggtcgactgaaaagtaggtcactttgacctaatttatgactttagttaaatatttcaggtactaattggcttagaatcatcaaactttgtcagttgatgcatcttgggtcctcggagtacaacacctgaaaagtaggtcactgtgacctacttttgaaaatttatggcttttattaaatatttcgggtactaattggcttagaatcaacaaactttgtcagttgatgcatcttgggtccacggagtaagttgactgaaatgtaggtcaccatgacctacttttgaaattttattactttatttaa...
position 1387 1938 2323 2442 2570 2904
XM_061326275.1 - Saccostrea echinata - NCBI
PREDICTED: Ostrea edulis metallo-beta-lactamase domain-containing protein 1-like (LOC125659624), transcript variant X3, mRNA. (4451 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgtgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gcatgtccaaagggtgttgaccaaaaagtaggtcaccctgacctacttttggaattggacggctatatttatataattcagatactatttgacctacagtcatcaaactttgtcagttgttgggtcttacatgtttgaagggtgttgatgaaaaagtaggtcaccttgacctactttttgaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaagatcattaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 2896 3042 3189 3468 3724 3980 4107
XM_048891361.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis metallo-beta-lactamase domain-containing protein 1-like (LOC125659624), transcript variant X2, mRNA. (4476 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgtgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gcatgtccaaagggtgttgaccaaaaagtaggtcaccctgacctacttttggaattggacggctatatttatataattcagatactatttgacctacagtcatcaaactttgtcagttgttgggtcttacatgtttgaagggtgttgatgaaaaagtaggtcaccttgacctactttttgaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaagatcattaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 2921 3067 3214 3493 3749 4005 4132
XM_048891360.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis metallo-beta-lactamase domain-containing protein 1-like (LOC125659624), transcript variant X1, mRNA. (4503 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgtgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gcatgtccaaagggtgttgaccaaaaagtaggtcaccctgacctacttttggaattggacggctatatttatataattcagatactatttgacctacagtcatcaaactttgtcagttgttgggtcttacatgtttgaagggtgttgatgaaaaagtaggtcaccttgacctactttttgaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaagatcattaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 2948 3094 3241 3520 3776 4032 4159
XM_048891359.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125651708 (LOC125651708), ncRNA. (5282 bp)
agtaggtcacagtgacctactttttgaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagtcttcggtttgtgtcgaccaaaaagtaggtcaccgtgacctacttttggtatttgacagctaaattactatatttcacacactatttgacctacaatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctact...tgttgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgctgaccagaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattc...
position 1581 1727 1875 2154 2282 2666 2793
XR_008803060.1 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis FAD-dependent oxidoreductase domain-containing protein 1-like (LOC125680598), mRNA. (4549 bp)
agtaggtcacagtgacctactttttgaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagtcttcggtttgtgttgaccaaaaagtaggtcaccgtgacctacttttggtatttgacagctaaattactatatttcagacactatttgacctacaatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctact...tgtcgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttatataattcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattc...
position 42 189 468 596 724 1236
XM_048920279.2 - Ostrea edulis - NCBI
PREDICTED: Saccostrea echinata 3-hydroxybutyryl-CoA dehydrogenase-like (LOC133177755), mRNA. (5390 bp)
tatcatgttgactcaaaagtaggtcatgatgacctactttttaaattttgcggccattctttttcaaaatgatttagaggcatattttgaacaatttaaggcctatgatcattaaactttgtcagttgatgtatcttgggtcctcgaagtacgtcaactaaaaaataggtcaccttgacctactttttgaattttatggc...aaacatatttattaaatagtaggtcacaatgacctgctttttgaactttgcaggcattcgatttcaaagcattttagaggcataatttggacattttaaggcctatgatcataaaactttgtaagttgatgcatcttggatcctcagaaaacgtcaactgaaaagtaggtcactgtgacctgtgtcaatttatatgacta...gggtcttcgaagtaggttgactgaaaagtaggtcaccgtgacctacttttgaaaatttatggcattatttaaatattactggtacttattggcttagaatcatcagactttgtcagttgatgcatctttggtcctcagagtacaacaactgaaaagtaggtcaccatgacctactttttgaaaatttatggctttaatta...
position 3829 3975 4121 4267 4393 4648
XM_061312660.1 - Saccostrea echinata - NCBI
PREDICTED: Saccostrea echinata uncharacterized LOC133200437 (LOC133200437), ncRNA. (353 bp)
experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:133200437" ORIGIN // atgattctaagccagaaagtacctaagatacttaaataaagtcataaaatgtcaaaagtaggtcaccgtgacctactttttggtcgacattttccgaaaacccaagatgcatcaactgacaaagtttgacaattctaagccaataagttcctgagatacttaaatatagccataaaatgtcaaaataggtcatggtgacctactttttggttgacattctccgaaaacccaagatgcatcaactgacaaagtttgatgattctaagccaataagtacctaagatacgtaaatatagccataaaatgtcaaaagtaggtcactgtgacctactttttggtcgatgttttccgaa
position 60 187 315
XR_009722940.1 - Saccostrea echinata - NCBI
PREDICTED: Saccostrea cucullata uncharacterized LOC134262549 (LOC134262549), ncRNA. (547 bp)
xref="GeneID:134262549" ORIGIN // aaattcaaaagtaggtcactgtgacctacttcttgttggacattcaatgaaaccctaagatgcctcaactgacaaagtttgataattccgagccaataagtaccagatataattaaatatagccataaaatgtcaaaagtaggtcacagtgacctactttttggtcaacgttctccgaaaacccaaggtgcctaaactgacaaagtttgatgattctaagcttatatgtacctgagatattcaaaagtaggtcactgtgacctattttttggtcgacattctccgaaaatccaagatgcctaaattgacaaagtttgatgattcttagccaataagtgcctgagatacttaaatatagccataaaatgtcaaaaataggtcactgcgacctactttttggtcgacgttctccgaaaacccaagatgcattaaatgacaaagtttgatgattttaggtcaatatgtaccagagatacttaattatagtcacaaaatgtcaaaagtaggtcaccatgacctactttatggtcgtcactctctgaaaacc
position 13 141 505
XR_009991024.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Saccostrea echinata uncharacterized LOC133179799 (LOC133179799), ncRNA. (1186 bp)
caatctatcctaagacccaagatgcatcaactgacaaagtttgatgattcttagccagttagggctgaagatatttaaatgtaactataaaatactataagtaggtcatggtgacctactttttgattgaaattttctgaggacacaagatgcattaattgacatagattgatgattctaagtcaataagtacttgagatattcaaaagtgggtcacagtgacctactttttggtcaacattctccaaaatcccaaggtgcataaactcacaacgtttgacaattctaagccaataagtaccctagaatacttaaatatagccataaatgtcacaagtaggtcaccgtgacctatattttgatcatcattctctgagaacccaagatgcatcaaataacaaaatttggtgattctaaaactctcggtgtctgaaataatgggattaaatgttttagaaaagattagccataaaattcaaaaagtaggtcacgatgacctacttttaagttgatgttatttgtggacccaagatgcaccaactgacaaagttttatgatcataggccttaaagtgtccaaaatatgcctccaattcaattt...
position 156 392 538
XR_009720176.1 - Saccostrea echinata - NCBI
PREDICTED: Ostrea edulis carboxypeptidase A4-like (LOC125651525), transcript variant X2, mRNA. (6829 bp)
agtaggtcacagtgacctactttttgaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagccttcggtttgtgtcgaccaaaaagtaggtcaccgtgacctacttttggtatttgacagctaaattactatatttcagacactatttgacctacaatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctact...tgttgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgctgaccagaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacactgacctacttttttttaattc...
position 5161 5307 5454 5733 5861 6245 6372
XM_048880160.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis RING finger protein 145-like (LOC125658441), transcript variant X1, mRNA. (6236 bp)
aagtaggtcacagtgacctactttttgaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcatcttcgtcttcggtttgtgtcgaccaaaagtaggtcaccgtgacctacttttggtatttgacagctaaattactatatttcagacactatttgacctacaatcatcaaactttgacagttgatgcatcttgagtcaacggagtgtgtcgaccaaaaagtaggtcaccttgacctactt...tgttgacgaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgatgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatattaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattc...
position 4709 4855 5002 5279 5790 5917
XM_048889708.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X9, mRNA. (7174 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5122 5268 5416 5695 5823 6208
XM_048917404.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X1, mRNA. (7186 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5134 5280 5428 5707 5835 6220
XM_048917405.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis RING finger protein 145-like (LOC125658441), transcript variant X2, mRNA. (6300 bp)
aagtaggtcacagtgacctactttttgaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcatcttcgtcttcggtttgtgtcgaccaaaagtaggtcaccgtgacctacttttggtatttgacagctaaattactatatttcagacactatttgacctacaatcatcaaactttgacagttgatgcatcttgagtcaacggagtgtgtcgaccaaaaagtaggtcaccttgacctactt...tgttgacgaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgatgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatattaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattc...
position 4773 4919 5066 5343 5854 5981
XM_056150591.1 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X4, mRNA. (7215 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5163 5309 5457 5736 5864 6249
XM_048917399.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X3, mRNA. (7217 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5165 5311 5459 5738 5866 6251
XM_048917398.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X8, mRNA. (7283 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5231 5377 5525 5804 5932 6317
XM_048917403.2 - Ostrea edulis - NCBI
PREDICTED: Saccostrea echinata ecdysteroid-phosphate phosphatase-like (LOC133172352), mRNA. (7866 bp)
ggtcgactaaaaagtaggtcacagtgacctacttttgaaatttatggctttaattaaatatatggggtactaattggctttgaatcatcaaactttgtcagttgatgacttttgggtcttcggagtaggtcgactaaaaagtaggtcaccatgacctacttgcaaaaatttatggctttaattaaatattttgggtactaattggcttagaatcataaaactttgtcagttcatgtgtcttgggtcctcggagtgcaacaactgaaaagtaggtcatggtgacctacttttgaaaattta...agattgactgaaaagtaggtcactgtgacctacttttgaaaatttatggcttcaattaaatattttcggtacttattggcttagaatcatcaaactttgtcagtcgatgtatctttggtcctcggagtacagcaactgaaaagtaggtcaccgtgacctacttttgaaaatttatggctttaattaaatatttcaggtactaattggcttaaaatcaaactttgtcaattgatgcatcttgggtccttggagtacaacaattgaaaagtaggtcactttgacctacttataaaattttat...
position 5142 5288 5434 5749 6261 6389 6514
XM_061307220.1 - Saccostrea echinata - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X7, mRNA. (7353 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5301 5447 5595 5874 6002 6387
XM_048917401.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X6, mRNA. (7365 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5313 5459 5607 5886 6014 6399
XM_048917402.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis carboxypeptidase A4-like (LOC125651525), transcript variant X1, mRNA. (7310 bp)
agtaggtcacagtgacctactttttgaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagccttcggtttgtgtcgaccaaaaagtaggtcaccgtgacctacttttggtatttgacagctaaattactatatttcagacactatttgacctacaatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctact...tgttgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgctgaccagaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacactgacctacttttttttaattc...
position 5642 5788 5935 6214 6342 6726 6853
XM_048880159.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X2, misc_RNA. (7058 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5134 5280 5428 5707 5835 6092
XR_008800251.1 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125678734 (LOC125678734), transcript variant X5, mRNA. (7911 bp)
tgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggc...gagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttat...gcatgttcggagttcgctgaccaaaaagtaggtcaccatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattcttaggatttaacta...
position 5859 6005 6153 6432 6560 6945
XM_048917400.2 - Ostrea edulis - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC125666634 (LOC125666634), mRNA. (4951 bp)
aaagtaggtcatggtgacctactttttgaatttcgcaggtaattattatgaaatggattttgatgaatatcttggacacttttgagcctatgatcatcaaaagttgtcaattgatggatcatgggaccttgaactgcatcatgtaaaaagtaggtcaccatgacctactttctgaattttatggctaatcatttatatatacattttaggttgttatttcagataccaagaggtttagaatcatcaaaccttgtaagttgatgcgtctagaggccttgaaacatatttataaaaaaaaagtaggtcacagtgacctacttttgaatttttgcagacattcaaatttcacattttcaattttagatgcatattttggacactatgaaagctaggatcatcaaactttgttagttgatgcatcttgagtcttcatagtttgttcaccaaaaagtaggtcactgtgacctacttttggaatttgacgtctatattttaatatttcagatactatttgacttacaattatcaaactttgtcagttgttgcattttgagtcttcagagtgtgttgactaaaaagtaggtcaccgtgacctatttt...
position 1469 1615 1765 1916 2044
XM_048899828.2 - Ostrea edulis - NCBI
PREDICTED: Ruditapes philippinarum uncharacterized LOC132713846 (LOC132713846), ncRNA. (908 bp)
caatcatcctatgaagtttgaatattgtgggctaaatggaactaaagttatgctcaagaaactgttttcaaattctaagtaatagtgaccttgacctttgaccttgtgaccccaaaatcaataggggtattctacccaatatggacaatcatcctatgaagtttgaacactgtgggccaaatagaacttaagttatgctccggaaactgttttcagttctaaggtcataatgaccttgacctttgacctgtgaccccaaaatctaaaggggtcttctaccaaatatggacaatcatcctatgaagtttgaacactgtaggacaaatggaacttaagttatgctccagaaactgttttcagttttaaggtcatagtgaccttgacctttgaccttgtgaccccaaaatcaataggggtcttctaccaaatatggacaatcatcctatgaagtttgaacactgtgggccaaaatgaacttaagttatgctccggaaactgttttcagttttaaggtcatagtgaccttgacctttgaccttatgacccaaaagtcaataggggtcttcaacccaatatggacaatcatcctatgaagtttga...
position 255 399
XR_009623496.1 - Ruditapes philippinarum (Manila clam) - NCBI
PREDICTED: Saccostrea cucullata vascular endothelial growth factor receptor 3-like (LOC134268003), partial mRNA. (6970 bp)
aaacgttgatattttgcttactataaagagtaggatcatcaaatcttgtaagttgatgcatctcaggacttgacatcatgttaatacaaaagtaggtcacggtgacctactttttagctcacctgagccgaaggctcaagtgagcttttctgatcacattttgttcgtcgtccgtctgtccgtctgtctgtctgtctgtc...aacaacatcaactaaaaagtaggtcatcgtgacctactttttgaattttatggctaatcttttctaaaacatttaatcccattatttcagacaccgagaggtttagaatctccaaatcttgtaagttgatgcatctagaggcgttaaaacatatttattaaaaagtaggtcactgtgacctactttttgaactttgcagg...gggttttcggagaatgtcgaccaaaaagtaggtcacattgacctacttttgtcattttatggctaaatttaggtatttcgggtacttattggtttgaaatcatcaaactttgttatttgatgcaccttgggttcttggagaatgatgatcaaaatataggtcacagtgacctacttgtgacatttatggctatatttaag...
position 3464 5345 5491 5765 6147 6511
XM_062750209.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Ostrea edulis two pore channel protein 1-like (LOC125664453), mRNA. (8631 bp)
agtaggtcacagtgacctactttttgaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagtcttcggtttgtgtcgaccaaaaagtaggtcaccgtgacctacttttggtatttgacagctaaattactatatttcagacactatttgacctacaatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctact...tgttgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgctgaccagaaagtaggtcaccatgacctacgattggaatttgacagctaattttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaaaaagtaggtcacattgacctactttttttgaattc...
position 3688 3834 3982 4261 4389 4773 4900
XM_056151036.1 - Ostrea edulis - NCBI
PREDICTED: Saccostrea cucullata uncharacterized LOC134235058 (LOC134235058), ncRNA. (1017 bp)
aatttggacacaatattcagtatggataaaaatttatatcccaagtatgattttgaaaaaaaaaattcaaatttttccgtattttttccttaagttggacttagttttttcatgataatttatggtgaagacctatattccagcaactataagttatagggatatgataattagtcagtggatacatcatgggtaaccacaaacgtcagtaccagaattaggtcatcttgacctacatttttctgcatgagtgactttggttaaatttttggtggaggtccatatctcagcatctataacttataatggcatgatgatttgtcattgtacaggttataagtaaccaacaacatcagtaccagaattaggtcattttgacctacatttttctgcatgaatgactttggttaaattgataatggaggttcatatttcagcaactataacttatagtggcatgatagttagtcagtggatacatcatgggtaaccacaaacgcctgtaccagaattaggtcatcttgacctacatttttccgcatgagtgactttgcataaatttatggtggaggtccatatctcagcaactataacttatag...
position 377 524
XR_009985317.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC130049079 (LOC130049079), ncRNA. (313 bp)
using gene prediction method: Gnomon." /db_xref="GeneID:130049079" ncRNA 1..313 /ncRNA_class="lncRNA" /gene="LOC130049079" /product="uncharacterized LOC130049079" /db_xref="GeneID:130049079" ORIGIN // tcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtctacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaattggacggctatatttatatattttcagatactatttgacctacagtcatcaaactttgtcagttgttgggtcttgcatgttcgaagggtttcaaccaaaaagtaggtcaccttgacctacttttggaattgga
position 27 155
XR_008797605.1 - Ostrea edulis - NCBI
PREDICTED: Epinephelus lanceolatus cysteine-rich and transmembrane domain-containing protein 1-like (LOC117264835), mRNA. (1824 bp)
gaccttttgaccttcattattttatcctgttagacatttgtgtcaagttcggtcagaattagtgaaagaatccttcagttatggccaaaaacacgtttgtgaggtcacagtgaccttggcttgtgtccaatctgacgtttgcgccaaattgaatagaaatcccatcaaagccgtcttgagtcacagggttcagaagaatgagacagacgtaaaggcacagtgacctttgaccttcaaattctaatcagctcattgttaagtccaagtgaaagtttgtgccatatttgaagaaattcccctgaggcattcttcagacatcgtgtcgacaaagatgagtcagacgaggtcacactgacctttttaccactaaagtctaatcagttcattgttcagtccaagtggacgttcatgccaaatttgaaaaaaaaacaaaaaaaaccttgaggtgttctcgagaggtcatgttagcgagaatgaaatggacgaggtcacggtgacctttaaagagataatcaccaaagtctaatcaggtcatcgtggagccccagtgaaagtttgtgccaaattaaaaaaaaaaatcccttaaggtttctgagatgt...
position 814 1056 1198
XM_033639127.1 - Epinephelus lanceolatus (giant grouper) - NCBI
PREDICTED: Haliotis rufescens uncharacterized LOC124143575 (LOC124143575), transcript variant X2, mRNA. (3073 bp)
ttcacttttttattatatatttaatctcatttcatgtgacagacatgcgactggagactccagcatctgatcgattgttctttttaatttcgctgcggttaaccgatacatattaacctcccaagaagacggagaagaaatgtttgttattttaacataaatgaaaggcgtctcttatacagatataaatatcccaaaatcccaagcaagtctgtgacctgctgtactggtctgaaggcgaggtcactgtgacctgctgtactggtctgaaagcgaggtcactgtgacctgctgtactggtctgaaggcgaggtcactgtgacctgctgtactggtctgaagacgaggtcacagtgacctgctgtactggtctgatggcgaggtcactgtgacctgctgtactggtctgatggcgaggtcactgtgacctgctgtactggtctgatggcgaggtcacagtgacctgctgtactggtctgatggcgaggtcacagtgacctgctgtactggtctgatggcgaggtcactgtaacctgctgtactggtctgatggcgaggtcactgtaacctgcagtactggtctgaaggcgaggtcactgt...
position 2225 2330
XM_046512601.2 - Haliotis rufescens (red abalone) - NCBI
PREDICTED: Ruditapes philippinarum uncharacterized LOC132740825 (LOC132740825), ncRNA. (1074 bp)
ctgtccgtccgtccgtctgttagcaatttggtttccggagcataacttaagttccatttggcccacaatattcaaacttcataggatgattgtccatattgggtagaagacccctattgattttggggtcataaggtcaaaggtcaaggtcactatgaccttaaaactgaaaacgttagcaatttggtttccggagcataacttaagttccatttggcccacaatattcaaacttcataggatgattgtccatattgggtagaagacccctattaattttggggtcatgaggtcaaaggtcaaggtcactatgaccttaaaactgaaaacagtttccggagcataacttaagttccatttggcccacagtgttcaaacttcataggatgattgtccatatttggtagaagacccctattgattttggggtcacaaggtcaaggtcactttgaccttaaaactgaaaacagtttccggagcataacttaagttccatttgtcctacagtgttcaaacttcataggatgattgtccatatttggtagaagacctctttagatttttgggtcaaaggtcaaggtcactatgaccttaaaactg...
position 212 506
XR_009627213.1 - Ruditapes philippinarum (Manila clam) - NCBI
PREDICTED: Dreissena polymorpha uncharacterized LOC127879514 (LOC127879514), transcript variant X2, ncRNA. (2109 bp)
tcaaggtcacgatgacccgaaatagttaaatggtttccggatgataactcaagaacgcttaggcctaggatcatgtaacttcataggtacattgatcataactcgtagatgacccctattgattttcaggtcactaggtcaaaggtcaaggtcacgatgacctgaaatagtaaaatggtttccggatgataactcaagaacgcttaggcctaggatcatgaaacttcataggtacattgatcatgactcgtagatgacccctattgattttcaggtcactaggtcaaaggtcaaggtcacagtgacctgaaatagtaaaatggtttctggatgataactcaagaacgcttaggcctaggatcatgaaacttcataggtacattgatcatgactcgtagatgacccctattgattttcaggtcactaggtcaaaggtcaaggtcacggtgacctgaaatagtaaaatggtttctggatgataactcaagaacgcttatgcctaggatcatgaaacttcataggtacattgatcatgactcgtagatgacccctattgattttcaggtcactaggtcaaaggtcaaggtcacggtgacctga...
position 669 814 959
XR_008049130.1 - Dreissena polymorpha - NCBI
PREDICTED: Ostrea edulis uncharacterized LOC130054058 (LOC130054058), mRNA. (4269 bp)
aaactttgatattttgcttagtataaggactaggatcatcaaattttgtcagttgatgcatcttaggacctaatatcatgttgtctcaaaagtaggtcatggtgacctattttttaatttcgcaggtaattattattaaatggattttgatgcatatcttggacacttttgagcctatgatcatcaaaagttgtcagttg...aggttgttatttcagataccgagaggtttagaatcatcaaaccttgtaagttgatgcgtctagaggcctcaaaacatatttatttaaaaaagtaggtcacggtgacctactttttttaattttgcagacattcaaatttcacattttcaatcagtttagatgcatattttggacactatgaaagctaggatcatcaaact...agtcttcagagtgtgttgactaaaacgtaggtcaccgtgacctatttttggattttgacggctatatttgaatatttcagatactatttgacttacaatcatcaaacttttgtcagttgatgggtcttgagtcttcagagtgtgtcgaccaaaaagtaggtcactgtgacctacttttggaatttgacgtttatatctga...
position 134 428 693 822
XM_056162355.1 - Ostrea edulis - NCBI
PREDICTED: Haliotis rufescens uncharacterized LOC124143575 (LOC124143575), transcript variant X1, mRNA. (3634 bp)
ttcacttttttattatatatttaatctcatttcatgtgacagacatgcgactggagactccagcatctgatcgattgttctttttaatttcgctgcggttaaccgatacatattaacctcccaagaagacggagaagaaatgtttgttattttaacataaatgaaaggcgtctcttatacagatataaatatcccaaaatcccaagcaagtctgtgacctgctgtactggtctgaaggcgaggtcactgtgacctgctgtactggtctgaaagcgaggtcactgtgacctgctgtactggtctgaaggcgaggtcactgtgacctgctgtactggtctgaagacgaggtcacagtgacctgctgtactggtctgatggcgaggtcactgtgacctgctgtactggtctgatggcgaggtcactgtgacctgctgtactggtctgatggcgaggtcacagtgacctgctgtactggtctgatggcgaggtcacagtgacctgctgtactggtctgatggcgaggtcactgtaacctgctgtactggtctgatggcgaggtcactgtaacctgcagtactggtctgaaggcgaggtcactgt...
position 2786 2891
XM_046512600.2 - Haliotis rufescens (red abalone) - NCBI
PREDICTED: Sebastes umbrosus solute carrier family 45 member 3 (LOC119475566), mRNA. (4402 bp)
acaaacagacacttagacccggtaagggtcaaggtcaccgtgacctcacgtccgtcccattctggtgaaatctcaggaacgccttgagctaatttcttcaaatttggcagaaacttcctcttggaatcaaggatgaactcattagattttggtagtcaaaggtcaaggtcactgtgaccttacatccgtctcattctcatgaaagcattatctcaggaacactttgagcaaatgtcttcaaatttggtacaaacttccacttcgactcaaggttgaactgattaggtcaaaggtcactctgacctcacgtccgtcccattctagtgacatctcaggaacgccttcagcgaattccttcaaattttgcaccaacatccacttcaacaaggatgaacttattatattttgtttgatgaaggtcaaaggtcaccgtgactttacgactgtcccattctcgtgatattttgggatcgccttgatcaaatttcctcgaatttggcgtaaacatccatttcatcaaggtgaagtgattaaatttttttggttaaaggtcaaggtcaccatgacctcacactcgtcccattctcatgaaatcttggg...
position 2181 2281 2540 2804
XM_037748436.1 - Sebastes umbrosus (honeycomb rockfish) - NCBI
PREDICTED: Saccostrea cucullata uncharacterized LOC134270389 (LOC134270389), transcript variant X2, mRNA. (2140 bp)
aaagggcgtggtctcaaggtcacatcaaagttgacctaaatttacaattaataaaaacgtgtatattttgcttattgcaaggactaggatcatcaattcttgtaagttgatgcatcttacgacttcacatcatgttaactcaaaagtaggtcacgatgacctactttttaaattttgcggggatttgttttcaaattgatttgaaggcatattttggacactttaaggcttatgatcatcaaactttgtcagttgatgcatcttgggtcctcaaacaatgtcaacttaaaagtaggtcaccgtgacctactttttgaactttatgacttatccttttaaaaacattaaatctcattatttcagacactgagaggtttagaatcatcaaatcttgtactttgatgcatcttggggtcttgaaacatatttatgaaaaagtaggtcactgtgacctactttttgaatt
position 1822 1968 2114
XM_062752626.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Saccostrea echinata uncharacterized LOC133182973 (LOC133182973), ncRNA. (6883 bp)
gtattaaaattgaggggcatgacatacctcttaagtaggtcacaatgaccttattttagtataagctgaacttgcttttttgcttttccagttttgattatagcattaagtacactgtgatgcctaaaatatagattgagcccaagtttaggtcacgttgaccttgagacacgtatcttaaaaggttctccaatttgatg...caacaacttacaattcactgtaatttaatcctacaggatataatttactttgtcacttgatgtttaggacattgtgatttccagccttattgtaggtcactatgacctccaaaaatatacatatatatgatgcacatcactggaagatagataacaccaaagatcattatttttatttatcacatttacttataaaacaa...taaaattgaggggcttatacatcccttaagtaggtcaccatgaccttgaaataaaattggccaacattaatgctgctctttgctttgatcatttacactgtgaggcctaagatatttgaccttgtgactagatgcatctttggggaccatgcaaaggtcacagtgacctctagatcttgaaatgaatgcctcataattgg...
position 2812 2925 3866 4270 5246
XR_009720568.1 - Saccostrea echinata - NCBI
PREDICTED: Saccostrea cucullata uncharacterized LOC134270389 (LOC134270389), transcript variant X4, misc_RNA. (2238 bp)
aaagggcgtggtctcaaggtcacatcaaagttgacctaaatttacaattaataaaaacgtgtatattttgcttattgcaaggactaggatcatcaattcttgtaagttgatgcatcttacgacttcacatcatgttaactcaaaagtaggtcacgatgacctactttttaaattttgcggggatttgttttcaaattgatttgaaggcatattttggacactttaaggcttatgatcatcaaactttgtcagttgatgcatcttgggtcctcaaacaatgtcaacttaaaagtaggtcaccgtgacctactttttgaactttatgacttatccttttaaaaacattaaatctcattatttcagacactgagaggtttagaatcatcaaatcttgtactttgatgcatcttggggtcttgaaacatatttatgaaaaagtaggtcactgtgacctactttttgaatt
position 1920 2066 2212
XR_009992810.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Saccostrea cucullata uncharacterized LOC134245455 (LOC134245455), ncRNA. (3776 bp)
gaagcctctaactcttagtatcccaagatgcatgaactgacaaagtttgatgattcttagccagttagggctaaagacatttcagtacggctatgaaataccataagtaggtcacagtgacctactttttgattttaaataaattttctgaggactcaagatgcattagttgactaagatttatcattctaagccaataagtacccaagatattcaaaagtaggtcactgtgacctactttatggtcaacattctatgaaaaacccaagatgtctcaactgccaaagtttaacaattctaggccaatacgtgccctggatatttaaatatagacataaaattctaaattaggtcaccgtgacctactttttggtcgacgttctcggtaaacccaaggttgcatcactaagaaagtttgatgattctgagccaataagtacctaagatacttagatatagccataaaatgtctaaagtaggtcaccatgacctactttttggttgacattttccgaatacccaagatgcatcaactgacaaagtttgatgattctaagccaataagtacgtacaagataattaaatatagccgtaaaatgt...
position 2720 2833 2961 3089
XR_009987432.1 - Saccostrea cucullata (small rock oyster) - NCBI
PREDICTED: Saccostrea cucullata uncharacterized LOC134270389 (LOC134270389), transcript variant X3, misc_RNA. (2310 bp)
aaagggcgtggtctcaaggtcacatcaaagttgacctaaatttacaattaataaaaacgtgtatattttgcttattgcaaggactaggatcatcaattcttgtaagttgatgcatcttacgacttcacatcatgttaactcaaaagtaggtcacgatgacctactttttaaattttgcggggatttgttttcaaattgatttgaaggcatattttggacactttaaggcttatgatcatcaaactttgtcagttgatgcatcttgggtcctcaaacaatgtcaacttaaaagtaggtcaccgtgacctactttttgaactttatgacttatccttttaaaaacattaaatctcattatttcagacactgagaggtttagaatcatcaaatcttgtactttgatgcatcttggggtcttgaaacatatttatgaaaaagtaggtcactgtgacctactttttgaatt
position 1992 2138 2284
XR_009992809.1 - Saccostrea cucullata (small rock oyster) - NCBI

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Redirect URI : http://ggrna.dbcls.jp/en/zoo/iubcomp%3aaggtcannrtgacct
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0.000 | 0.000 | search_start;
0.097 | 0.097 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((nt:aggtcataatgacct)%7C(nt:aggtcatattgacct)%7C(nt:aggtcatagtgacct)%7C(nt:aggtcatactgacct)%7C(nt:aggtcattatgacct)%7C(nt:aggtcattttgacct)%7C(nt:aggtcattgtgacct)%7C(nt:aggtcattctgacct)%7C(nt:aggtcatgatgacct)%7C(nt:aggtcatgttgacct)%7C(nt:aggtcatggtgacct)%7C(nt:aggtcatgctgacct)%7C(nt:aggtcatcatgacct)%7C(nt:aggtcatcttgacct)%7C(nt:aggtcatcgtgacct)%7C(nt:aggtcatcctgacct)%7C(nt:aggtcacaatgacct)%7C(nt:aggtcacattgacct)%7C(nt:aggtcacagtgacct)%7C(nt:aggtcacactgacct)%7C(nt:aggtcactatgacct)%7C(nt:aggtcactttgacct)%7C(nt:aggtcactgtgacct)%7C(nt:aggtcactctgacct)%7C(nt:aggtcacgatgacct)%7C(nt:aggtcacgttgacct)%7C(nt:aggtcacggtgacct)%7C(nt:aggtcacgctgacct)%7C(nt:aggtcaccatgacct)%7C(nt:aggtcaccttgacct)%7C(nt:aggtcaccgtgacct)%7C(nt:aggtcaccctgacct))?to=0&format=json
0.448 | 0.351 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((nt:aggtcataatgacct)%7C(nt:aggtcatattgacct)%7C(nt:aggtcatagtgacct)%7C(nt:aggtcatactgacct)%7C(nt:aggtcattatgacct)%7C(nt:aggtcattttgacct)%7C(nt:aggtcattgtgacct)%7C(nt:aggtcattctgacct)%7C(nt:aggtcatgatgacct)%7C(nt:aggtcatgttgacct)%7C(nt:aggtcatggtgacct)%7C(nt:aggtcatgctgacct)%7C(nt:aggtcatcatgacct)%7C(nt:aggtcatcttgacct)%7C(nt:aggtcatcgtgacct)%7C(nt:aggtcatcctgacct)%7C(nt:aggtcacaatgacct)%7C(nt:aggtcacattgacct)%7C(nt:aggtcacagtgacct)%7C(nt:aggtcacactgacct)%7C(nt:aggtcactatgacct)%7C(nt:aggtcactttgacct)%7C(nt:aggtcactgtgacct)%7C(nt:aggtcactctgacct)%7C(nt:aggtcacgatgacct)%7C(nt:aggtcacgttgacct)%7C(nt:aggtcacggtgacct)%7C(nt:aggtcacgctgacct)%7C(nt:aggtcaccatgacct)%7C(nt:aggtcaccttgacct)%7C(nt:aggtcaccgtgacct)%7C(nt:aggtcaccctgacct))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.491 | 0.043 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]