2025-04-05 08:28:05, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XR_004111602 4343 bp RNA linear ROD 21-OCT-2019 DEFINITION PREDICTED: Mastomys coucha testis and ovary specific PAZ domain containing 1 (Topaz1), transcript variant X3, misc_RNA. ACCESSION XR_004111602 VERSION XR_004111602.1 DBLINK BioProject: PRJNA578167 KEYWORDS RefSeq. SOURCE Mastomys coucha (southern multimammate mouse) ORGANISM Mastomys coucha Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022196906.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Mastomys coucha Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4343 /organism="Mastomys coucha" /mol_type="transcribed RNA" /isolate="ucsf_1" /db_xref="taxon:35658" /chromosome="Unknown" /sex="male" /tissue_type="liver" /dev_stage="adult" gene 1..4343 /gene="Topaz1" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:116072959" misc_RNA 1..4343 /gene="Topaz1" /product="testis and ovary specific PAZ domain containing 1, transcript variant X3" /db_xref="GeneID:116072959" ORIGIN
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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