2024-11-15 14:02:07, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XR_002760893 1652 bp RNA linear VRT 26-DEC-2017 DEFINITION PREDICTED: Seriola lalandi dorsalis uncharacterized LOC111656766 (LOC111656766), transcript variant X1, ncRNA. ACCESSION XR_002760893 VERSION XR_002760893.1 DBLINK BioProject: PRJNA423295 KEYWORDS RefSeq. SOURCE Seriola lalandi dorsalis ORGANISM Seriola lalandi dorsalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019524922.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Seriola lalandi dorsalis Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1652 /organism="Seriola lalandi dorsalis" /mol_type="transcribed RNA" /isolate="HSWRI2012SDOR001" /sub_species="dorsalis" /db_xref="taxon:1841481" /chromosome="Unknown" /tissue_type="heart" /dev_stage="adult" /ecotype="SW California" gene 1..1652 /gene="LOC111656766" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns" /db_xref="GeneID:111656766" ncRNA 1..1652 /ncRNA_class="lncRNA" /gene="LOC111656766" /product="uncharacterized LOC111656766, transcript variant X1" /db_xref="GeneID:111656766" ORIGIN
cctgctcagtgtttctgcggagctttttcgtctttggtgtttttaaacagctgtatacacacacacccgtcatccacagattaatatactacatcatattactgtagtcagctgaatgaaagctgtctgtaggttcaggtgtaggcccagcagagaaaacagattaggggatataagcaacaccgcagacaacaggagaatgcagctcggaggactaagatgtcgtcgacaagagagggcactcagcttcagtagtttggagatattttgggtttttacagtctgacaaaaaacagtgcaatctgcactgcacactgtgccggagaaacgttccattaaaaacaggtaacacctcaaacctgtttcatcatttgaaataatatcaccagttagaacacacagaaactaagaaactacatgtctaaacaagttttagaggacccttgaccagcgccaggccagtacccagtgtaaatcttctctgtctgattatttatttatttattttgcagtctgatcatgtgacatgtatgctgtatcacactgcagaacctttctatttactttgttgagcaaaaaacactgaaaaggattttgattttaatcgtgtatatttgattatgttttgaatgtttgtgcctctgagtttttgaatgttatgctgtttggcaagtgtttgtcgtgttctgactaaatagaaaagttaaaaaccacagttgactgtctggtttcttcaactttctctcaggagcaaaaatcagcctttaaacctgaaagaaataacgatgaggcatttatcgtgataaatattgatatcgtctgatatggaaatttttatcgtgacaacggttttgttcatatcgcccaggcataggtccaggtgtagctctgagattcaggtgtaggccgaggtgtagctctgaggttcaggtgtaggtctaggtgtagctctgaggttcaggtgtaggcctaggtgtagctctgaggttcaggtgtaggcccaggtgtagctttgaggtccaggtgtaggcccaggtgtagctctgaggcccaggtgtaggtctaggtgtagctctgaggttcaggtgtaggtctaggtgtagctttgaggtccaggtgtaggcccaggtgtagctctgaggcccaggtgtaggtctaggtgtagctctgaggttcaggtgtaggtctaggtgtagctctgaggttcaggtgtaggtccaggtgtagctctgaggtccaggtgtaactgaggtccaggtgtaggcccaggtgtagctctgaggcccaggtgtaggcccaggtgtagctctgaggttaaggtgtaggccctgatgtagctctgaggttcaggtgtaggtccaggtgtagctctgaggtccaggtgtagctctgaggttcaggtgtaggtccaggtgtagctctgaggtccaggtgtaggtccaggtgtagctttgaggttcaggtgtagatccaggtgtagctctgaggttcaggtgtaggcccaggtgtagctctgaggtccaggtgtaggtccaggtgtagctctgaggttcaggtgtaggcccagatagagctctgaggttcaggtgtaggtccaggtgtagctctgaggtccaggtgtaggtccaggtgtagctctgaggttcaggtgt
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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