LOCUS       XM_069959542            1681 bp    mRNA    linear   VRT 18-NOV-2024
DEFINITION  PREDICTED: Dendropsophus ebraccatus vimentin (VIM), mRNA.
ACCESSION   XM_069959542
VERSION     XM_069959542.1
DBLINK      BioProject: PRJNA1181002
KEYWORDS    RefSeq.
SOURCE      Dendropsophus ebraccatus (hourglass treefrog)
  ORGANISM  Dendropsophus ebraccatus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Hylidae;
            Hylinae; Dendropsophini.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091455) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_027789765.1-RS_2024_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/13/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Dendropsophus ebraccatus"
                     /mol_type="mRNA"
                     /isolate="aDenEbr1"
                     /db_xref="taxon:150705"
                     /chromosome="2"
                     /sex="female"
                     /tissue_type="whole body, brain, muscle, liver"
                     /dev_stage="adult"
                     /geo_loc_name="USA: Vassar College, Poughkeepsie, New
                     York"
                     /lat_lon="41.684639 N 73.895553 W"
                     /collection_date="2018-03-28"
                     /collected_by="Justin Touchon, Erich Jarvis"
     gene            1..1681
                     /gene="VIM"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 25 Proteins"
                     /db_xref="GeneID:138784062"
     CDS             33..1442
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_069815643.1"
                     /db_xref="GeneID:138784062"
                     /translation="

MSSSSSSRSSYKRMFGGNPRSSSSGGRYVTSSSSRYSLGSSYRPGGTGGLSSRVVYTTSSAAPAISKSSSVRLRSSMPAVRMSDGVDFSLADAINLEFKANRTNEKAEMQELNDRFANFIDKVRFLEQQNKILVAELEQLKGKGTSRVGDLYEDELRELRRQVDLLTNEKARVEVDRDNLGDDLQRLRERLQDEMIQKEEAESNLQSFRQDVDNASLARIDLERKLESLQEEIIFLKKLHDEEIRELQAQIQEQHVQIDMDVAKPDLTAALRDVRQQYENVAAKNLSDAEEWYKSKFADLSEAANRNNDALRQAKQEANDYRRQIQSLTCEVDAMKGSNESYERQMREMEENFAIEAANYQDTINRLQEEIQNMKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISIPAHSFSNMSLRETNLDSHPMSESHSKRTLLIKTVETRDGQVINESSQQHDDYQD"

ORIGIN      

gtccgctccgtctccgcacctcaccggacaccatgagcagcagcagcagcagcagatcttcctacaagaggatgttcggcgggaatccccggtccagctcctcgggcggccgctatgtcacctccagcagcagccggtacagcctgggcagctcctaccggcccgggggcaccgggggcctctccagcagggtggtctacaccacctcctccgccgcccccgccatctccaagtcgtcctcggtgcggctgaggagcagcatgcccgccgtcaggatgagtgacggggtggacttctccctggcagacgccatcaacctggagttcaaagccaaccggaccaacgagaaggcggagatgcaggagctcaacgaccgcttcgccaacttcatcgacaaggtgcgattcctggagcagcagaacaagatcctggtggccgagctggagcagctgaaggggaagggcacgtcccgggtgggcgatctgtacgaggacgagctgcgggagctgcggaggcaggtggacctgctgaccaatgagaaggctcgggtggaggtggacagggacaacctaggggacgacctgcagagactgcgagagaggctgcaggatgagatgattcagaaggaagaagcggagagcaatctgcagtccttccgccaggacgtggataacgcttctctcgcccgcatcgacctggaacgcaaactggaatctctccaagaagaaattattttcctgaagaagctgcatgatgaggaaatccgtgaacttcaagcacaaatccaggaacaacacgtccagatcgacatggacgtcgccaaaccagatctgacagccgctttgcgcgatgtccgtcagcagtatgagaacgtcgccgctaagaacctgtccgacgccgaagaatggtacaagtccaagtttgctgatctgtctgaagctgctaatcgcaacaatgatgccctgcgccaggccaagcaggaggccaacgactaccgccggcagatccagtccctgacctgcgaggtcgacgcaatgaaaggatctaacgagtcttatgaacgccaaatgcgggagatggaggagaactttgccattgaagctgctaactaccaggacactatcaaccgactgcaggaagagatccagaacatgaaggaggagatggcccgccacctgcgtgagtaccaggaactgctcaacgtcaagatggcgctcgatatcgaaatcgcaacttacaggaaactgcttgaaggagaggagagcaggatcagtattccagctcattccttctctaacatgagcctgagagaaaccaacctggactctcacccaatgtcagaatcacattctaagagaacccttctgatcaagactgtggagaccagagatggtcaggtcatcaatgagagttctcagcagcacgacgactatcaggactgagcgctgcgcggcctccgctggcgtcgtgtcgtccccgggtttcatccttgaagagaagcagctgacaatatgacaatacgacaagtgcctttgctgttctatcaggaggatagccggagcagagcacctctcgctccccagctgctggggcatgctgggactactagtccctctgcagcgagggagccacaggtggcctgtcctggggggttagtcttagggggtttgcagagtggagt

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