LOCUS       XM_069522750            1467 bp    mRNA    linear   VRT 28-OCT-2024
DEFINITION  PREDICTED: Paralichthys olivaceus calponin homology
            domain-containing protein DDB_G0272472-like (LOC138407293), mRNA.
ACCESSION   XM_069522750
VERSION     XM_069522750.1
DBLINK      BioProject: PRJNA1170318
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Paralichthys olivaceus (Japanese flounder)
  ORGANISM  Paralichthys olivaceus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei;
            Paralichthyidae; Paralichthys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091095) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_024713975.1-RS_2024_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/17/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1467
                     /organism="Paralichthys olivaceus"
                     /mol_type="mRNA"
                     /isolate="ysfri-2021"
                     /db_xref="taxon:8255"
                     /chromosome="3"
                     /sex="female"
                     /tissue_type="muscle"
     gene            1..1467
                     /gene="LOC138407293"
                     /note="calponin homology domain-containing protein
                     DDB_G0272472-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:138407293"
     CDS             1..1422
                     /gene="LOC138407293"
                     /codon_start=1
                     /product="calponin homology domain-containing protein
                     DDB_G0272472-like"
                     /protein_id="XP_069378851.1"
                     /db_xref="GeneID:138407293"
                     /translation="

MAMSCKEATWRKEKESMQNADYERLKEELELDLKDAKKELRIQEKEYRSLSNRNQSQQAEIHKIRRDLKQKCNQVNELEYSIKQREQVIDRTTHEKQALDHQINELTTKLKAMGTKVLQNEPDWQSEIKALKDELSREQAEKEAGFIKIRALKDELSHEQAEKKALKDEPSREQAEKKAGFVQIKALKDELSREQAEKKAGFVQIKALKDELSREQAEKKAGFVQIKALKDELSREQAEKKAGFVQIKALKDELSCEQAEKKAGFVQIKSLKDELSHEQAEKKAGFITIKALKDELSREQAEKQAGSNKIKELERLLKVTEEKWVTKHEARIVHTDQMIASLTSQNMALEASNQKLISMQQAIETRILQNKTEWETKVDALEDHLSCEQAEKEAGFIKIKELEKLVRDTEQMWAAKHEADIKMLILKQIKLQELALMTDKDKAKIVKEQKKAKKEAEKRHKKELKEKKKQEKR"

     polyA_site      1467
                     /gene="LOC138407293"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

atggccatgtcctgcaaagaagctacatggcggaaggaaaaggagagcatgcagaatgcagactatgaaagactcaaggaggaactagagctcgatctcaaggatgccaagaaggagttgaggatccaagagaaggagtacaggtccttgagtaatcgcaaccaaagccagcaggcagagatccacaagatcagacgtgacctgaagcaaaagtgcaaccaggtgaatgagctggagtattctataaaacagagggaacaggtgatcgacaggactacgcatgagaaacaggcgctggaccaccaaatcaatgagctcacaaccaagctcaaagctatggggacaaaagttctccagaacgagcctgactggcagtcagaaatcaaggctctgaaggacgagctcagccgtgagcaggcagagaaggaggcgggcttcatcaaaatcagggctctgaaggacgagctcagccatgagcaggcagagaagaaggctctgaaggacgagcccagccgtgagcaggcagagaagaaggcgggcttcgttcaaatcaaggctctgaaggacgagctcagccgtgagcaggcagagaagaaggctggcttcgttcaaatcaaggctctgaaggacgagctcagccgtgagcaggcagagaagaaggcgggcttcgttcaaatcaaggctctgaaggacgagctcagccgtgagcaggcagagaagaaggctggcttcgttcaaatcaaggctctgaaggacgagctcagctgtgagcaggcagaaaagaaggctggcttcgttcaaatcaagtctctgaaggacgagctcagccatgagcaggcagagaagaaggctggcttcattacaatcaaggctctaaaggacgagctcagccgtgagcaggcagagaagcaggctggctccaataaaatcaaggagctggagagactgctcaaggtcacagaagagaagtgggtgaccaagcatgaggccagaattgtccatacggatcagatgatcgccagtctcactagtcagaatatggcactggaagccagcaaccagaagctgatctccatgcagcaagccatcgagacaaggatcctccagaacaagactgagtgggagacgaaagttgacgctctggaggaccatctcagttgtgagcaggctgagaaggaggctggcttcataaaaatcaaggagctggagaaactggtccgcgatactgagcagatgtgggcggccaagcacgaggccgacataaagatgctcatcctgaaacagatcaagcttcaggaactggccttgatgaccgataaggacaaggcaaagatagtaaaggagcaaaagaaagcaaagaaagaggcagagaagaggcataagaaggagctgaaagagaagaagaagcaagagaagagatagaaactagacagagagaaggaggagaagaggcaaagaaaatgaaaa

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