2025-02-23 08:27:41, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_069458628 1849 bp mRNA linear PRI 23-OCT-2024 DEFINITION PREDICTED: Eulemur rufifrons vimentin (VIM), mRNA. ACCESSION XM_069458628 VERSION XM_069458628.1 DBLINK BioProject: PRJNA1166309 KEYWORDS RefSeq. SOURCE Eulemur rufifrons (Bennett's brown lemur) ORGANISM Eulemur rufifrons Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Eulemur. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091007) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_041146395.1-RS_2024_10 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 10/03/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1849 /organism="Eulemur rufifrons" /mol_type="mRNA" /isolate="Redbay" /isolation_source="captive animal at Duke Lemur Center, NC" /db_xref="taxon:859984" /chromosome="25" /sex="female" /tissue_type="kidney" /dev_stage="adult" /geo_loc_name="Madagascar" /collection_date="2023-01-11" gene 1..1849 /gene="VIM" /note="vimentin; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins" /db_xref="GeneID:138375260" CDS 131..1531 /gene="VIM" /codon_start=1 /product="vimentin" /protein_id="XP_069314729.1" /db_xref="GeneID:138375260" /translation="
MSTRSVSSSSYRRMFGGPGTASRPSSNRSYVTSTTRTYSLGSALRPSTSRTLYASSPGGAYVTRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDILRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE"
ORIGIN
tccggggtccccgcgccagagacgcagcagcgctcccaccgcccacacccgccgcgccctcgctcgcctcacctcccggagccagtgctccccaccgcagctgcccagcccaccgccaccctccgcagccatgtccaccaggtccgtgtcctcgtcctcctaccgtaggatgttcggtggccccggcaccgcgagccggccgagctccaaccggagctacgtgacctcgaccacccgcacctacagtctgggcagcgcgctgcgccccagcaccagccgcaccctctacgcctcgtccccgggcggcgcgtatgtcacgcgctcctcggccgtgcgcctgcggagcagcgtgccgggcgtgcggctgctgcaggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgcaccaacgagaaggtggagctgcaggagctgaatgaccgcttcgccaactacatcgacaaggtgcgcttcctggagcagcagaacaagatcctcctggccgagctcgagcagctcaagggccagggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcaggtggaccagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctggccgaggacatcctgcggctccgggagaaattgcaggaggagatgcttcagagagaggaagccgagagcaccctgcaatctttcagacaggatgttgacaatgcgtctttggcacgtcttgaccttgaacgcaaagtggaatccttgcaagaagagattgcctttttgaagaaactacacgacgaggaaatccaagagctacaggcccagattcaggaacaacatgtccaaatcgatgtggatgtttccaagcctgacctcacggctgccctgcgtgacgtacgtcagcagtatgaaagcgtggcagccaagaaccttcaggaggcagaagagtggtacaagtccaagtttgctgacctctccgaggctgctaaccggaacaacgatgccttgcgccaagcgaagcaggagtccaatgagtaccggagacaggtgcagtccctcacctgcgaagtggatgctcttaaaggaactaacgagtccctggaacgccagatgcgtgaaatggaagagaactttgctgtcgaagctgctaactaccaagacactattggccgcctgcaggatgagattcagaacatgaaggaagagatggctcgtcaccttcgtgaataccaagacctgctcaatgttaagatggctcttgacattgagattgccacctacaggaagctgctggaaggcgaggagagcaggatttctctgcctcttccaaacttttcctccctgaacctgagagaaactaatctggattcactccctctggttgacacccactccaaaaggacccttctgattaagacggttgaaactagagatggacaggttatcaatgaaacttctcagcatcacgatgatcttgaatgaaaacctcacacactcagtgcagcaatatattaccagcaagaataaaaaagaaatccatatcttcaaggaacatcttccaagtgcctttctgcagtttttcaaaagcgcaagatagatttggagtagaaataagctctagttcttaaccaccgatactcctaaaagatttagaaaaaaagtttacaccataatctagtttatgaagaagtcttgtgctagaatactttttaaaaagtatttttgaatatcattaaaactgcttttttttctccagcaaatatccaatcaacttgtttttctgcttcaataaatctttgg
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@meso_cacase at
DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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