2025-02-23 08:00:42, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_069039744 3313 bp mRNA linear INV 08-OCT-2024 DEFINITION PREDICTED: Tenebrio molitor visceral mesodermal armadillo-repeats (vimar), mRNA. ACCESSION XM_069039744 VERSION XM_069039744.1 DBLINK BioProject: PRJNA1168175 KEYWORDS RefSeq. SOURCE Tenebrio molitor (yellow mealworm) ORGANISM Tenebrio molitor Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091046) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963966145.1-RS_2024_10 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 10/03/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3313 /organism="Tenebrio molitor" /mol_type="mRNA" /db_xref="taxon:7067" /chromosome="1" gene 1..3313 /gene="vimar" /note="visceral mesodermal armadillo-repeats; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:138124638" CDS 147..2015 /gene="vimar" /codon_start=1 /product="GTPase-GDP dissociation stimulator vimar" /protein_id="XP_068895845.1" /db_xref="GeneID:138124638" /translation="
MSSLLSDLSNAVDANNEQDILDNLKLILAQGVNIELENSNILKRIIPLNNDKITQAFVEVAAEWCKLEHNRKFFTDKEIIEYLLGLLEKSEESLIVSTIRALGNICYENDEARQIIDKKGLSTVISILEADCSRKNNLLTLKVSGFLVNLLTSNDELQKAALKLNIVDIVEKVLNKYLKSFNENQMLFAFLLTILNNVIDYIEDQDVPFKESLCCVLVDIFKMSTTPEISVICLEILHGQSHKDEIKTLLARQGVCELVFELIEKYRNQVNDEESRTVMKMACDMIVIILTGDDCMYLLYNNGQGKVYENMITWLDSDDPDLLSTGVLALGNFARKDTHCIHMVQNGISKKLIALLSRHNTSQSDIKVQHALLSTLKNLVIPQQNKPIVLEEGLIDVIYPMIELDQYLVIFKLLGTFRMVIDGQEKAALDLISRKEFLEKLIYWCYNSDHLGVRGEIPRLLSWLIKHCHSFKPFKTLIQIKDSVKCLVEMTSSNHAVMQNESFYALNLLCIGCGVGNESDSSNGVNGDHAAEDGDQTLFDQLINADIGKNLSFVVNKYSDKMDKHTIENLLTLLEQLINSPSLVGHLKSNNVGEALAKLTANPNAQAVSEKLNHVTVQINEN"
polyA_site 3313 /gene="vimar" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
atggcgtggtggtgaattcgagatgaggtagaagtgagcatgcgccttgtgccatgttttgagatataaacaaggttatgttgatgaaaattgtcaagtgttgttttggcgtggagttttgaaagtgtatttcacctagtttagaaatgagttctcttttaagcgatttatctaacgcagtcgacgcaaataacgaacaggacattctagataacttaaaacttatattagctcagggtgtaaacatcgaattagaaaacagtaatattttgaaacgcatcataccattaaataatgacaaaattacacaagcttttgtcgaagtagcggcagaatggtgcaaactggagcacaacagaaaatttttcacagataaagaaatcattgagtacctcttggggctgttggaaaaatcagaggaatccctaattgtgagtacaatcagagcgttggggaacatttgttacgagaatgacgaggcgaggcaaattatcgataaaaaaggcctttccacagttatatcgatacttgaggcagattgcagtagaaaaaacaatttgcttacgctgaaagtcagtggatttttggtcaacctgctaacttcaaatgatgaattgcaaaaagcagctttaaaattaaacatagtggatatagttgaaaaagtgcttaataaatatttaaaatcgttcaatgaaaaccagatgctttttgcatttttattaacgatcttgaacaatgtgatcgactacattgaggatcaagacgtaccttttaaagaaagtctctgctgtgttcttgtagacatttttaaaatgtcgaccacgccagaaatttccgtcatatgcctggaaattctacatggccaatcgcacaaagatgaaataaaaacgttattggctagacagggcgtgtgtgagttggtatttgagctcattgaaaaatacagaaatcaggtaaacgatgaagagagtcggacggtcatgaaaatggcttgtgatatgattgttattatattgactggagatgattgtatgtacttactatataacaacgggcaaggaaaagtgtacgagaacatgattacgtggcttgactccgacgatccagatttgttgagtactggtgtcctggctttgggaaattttgccagaaaagacactcactgcattcacatggttcaaaatgggatctcaaagaaactgatagctttgctatcaaggcataacacgagtcaaagtgatataaaagtgcagcatgctttattgagcactttaaaaaatctagtgatacctcagcagaacaaacccatagttttggaggaaggtttaatcgacgtcatttatcccatgatcgagctcgaccaatacttggtgatattcaagctattgggaacattccgcatggtcatagacggtcaagaaaaggcagccttggatttgatttcccgcaaggaatttttggaaaagctgatctactggtgctacaattcagaccacttgggagtgcgcggtgaaatcccccggctgctgtcctggttaataaaacactgccattccttcaaaccttttaaaactttaatccaaatcaaggacagcgtgaaatgtttggtggagatgacgtcgtctaatcacgccgttatgcagaacgaatctttctacgccttgaatctgttatgcatcggttgcggggtcggcaacgaaagcgacagttcgaacggggtgaacggggatcacgcggccgaggacggagatcagacgttgttcgaccagttgatcaacgccgacattggtaaaaatctcagttttgtcgttaacaagtacagtgataaaatggataaacacaccatcgaaaatttgttaactctactagaacagttaattaattctccctcccttgtgggacacttaaaatctaacaatgtcggagaggcgttggccaaattgacggcaaatcccaacgcgcaagccgtcagcgaaaaattaaatcacgtcacggttcagattaacgaaaattgaaacaacttatggcgaattgagtgatcaaagtaccaatctaaagtctagattccttattagccaataagatagttactatttttcattatcgtgcaattttggtgtatgttagaattatgaatagttgccttcaagtgcatgttttaaagcgatctaccacatgttctccgttttagcattacgatgaaagcaattttaatggcgttttaaaagtgtttaaatcgcatataatgcacaagttttagtgccattttacatttagtgtactaatcttatgaaagaacgtacgtaggtatacgcattagtcaatgctggctttttactcggcaggatctgccgaaaattacacgttaaatacacatgtttgttttaatttaatattttatgtgcagttatgaacttagagcttgacactagagtggttatgcaccaaccgttttaatcaagtcaatttgtttgacaagaaattacgactatttaaattccagctgtgcatttagaagttgttggtgacagaatttacgaagttatttgtaactcaccccagtgtgtcacctctcgtaattattatttattttctattcatcaaaacaacaaaatttcactagtttggtgaaactttaaccagcttctgtttcaacacttccgtttttgtctatgttcaaccatttttgtggataaatatagccacaaatggttgaatatttaaaatcaagtgctgtccgccttcgtcaacccctttgatgcgacaaatactgtgatgtaagcgacgctgaatgaataacagactcccttaattaatactgaacttttctcataaaaacatcaaagtgaaactagaataactttagggattacatgaacagcaccgtaagctggtgagaattttctttttttttaatataaagttataccgaaacaaaatcgtgatagttaatttaatctgtcaagttcagagaagttataaaacgttgcagggagtataatccgcacaaagagctttttaaagtaagttcatagttgttactggttttgcagtatttttatttattttttgttattgaaaggagtgttttggagagcattgatgcgtctccattcattatttcattttttttacatttatcttttgagctgacaagtttgatacgttaaaaggaggctcgttttattaaggaatacaatgttttgtcaacaataaaatataaatcgcacttttaataattatacttaatgcatcacttttcatgtttttacacaaaactgtattgttccaaagaataaacttgcattacgga
//
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@meso_cacase at
DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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