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2025-02-23 08:18:57, GGRNA.v2 : RefSeq release 228 (Jan, 2025)

LOCUS       XM_068986707            1852 bp    mRNA    linear   MAM 05-OCT-2024
DEFINITION  PREDICTED: Capricornis sumatraensis vimentin (VIM), mRNA.
ACCESSION   XM_068986707
VERSION     XM_068986707.1
DBLINK      BioProject: PRJNA1168921
KEYWORDS    RefSeq.
SOURCE      Capricornis sumatraensis (Sumatran serow)
  ORGANISM  Capricornis sumatraensis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Caprinae; Capricornis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091083) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_032405125.1-RS_2024_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/04/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Capricornis sumatraensis"
                     /mol_type="mRNA"
                     /isolate="serow.1"
                     /db_xref="taxon:34865"
                     /chromosome="15"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /dev_stage="adulthood"
                     /geo_loc_name="China: Shaanxi"
                     /collection_date="2022-12"
     gene            1..1852
                     /gene="VIM"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 22 Proteins"
                     /db_xref="GeneID:138091059"
     CDS             143..1543
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_068842808.1"
                     /db_xref="GeneID:138091059"
                     /translation="
MSTRSVSSSSYRRMFGGPGTASRPSSTRSYVTTSTRTYSLGSALRPSTSRTLYTSSPGGVYATRSSAVRLRSGVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMHEMEENFSVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE"
ORIGIN      
ccactctcgctccggggtccccgcgccagagacgcagcagcgctccctctgcccacacccaccgcgccctcgcgctcgcctcttctcccggagccagtccgtgctaccgcagtcgcccagtctaccgccaccctctgcagccatgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggcccaggcaccgcgagccggccgagctccacccggagctacgtgaccacgtccacccgcacctacagcctgggcagcgcgctgcgcccctccaccagccgcaccctctacacctcgtccccgggtggcgtgtacgccacgcgctcctcggctgtgcgcctgcggagcggcgtgcccggcgtgcggctgctgcaggactcggtggacttctcgttggccgacgccatcaacaccgagttcaagaacacccgcaccaacgagaaggtggagctgcaggagctcaatgaccgcttcgccaactacatcgacaaggtgcgcttcctggagcagcagaacaagatcctgctggctgagctcgagcagctcaagggacagggcaagtcgcgcctgggggacctctacgaggaggagatgcgagagctgcgccggcaggtggaccagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctggccgaagacatcatgaggctccgggagaagttgcaggaggagatgcttcagagagaggaagccgagagcactctgcagtctttcagacaggatgttgacaatgcctctttggcacgtcttgacctggagcgtaaagtggaatccctgcaagaagagattgcctttttgaagaaactgcacgatgaggaaatccaggagcttcaggcccaaattcaagaacagcacgtccaaatcgatatggatgtttccaagcctgacctcacagctgccctgcgtgatgtccgtcagcagtatgagagcgtggccgccaagaaccttcaggaggctgaggaatggtacaagtccaagtttgctgacctctctgaagctgctaaccgcaacaacgacgccctgcgccaggccaagcaggagtcgaacgagtaccgccggcaggtgcagtctctcacctgcgaggtggatgcgctcaaagggactaacgagtctctggaacgccagatgcatgaaatggaagagaacttctctgtggaagctgctaactaccaagacactattggccgcctgcaggatgagattcagaacatgaaggaagagatggctcgtcacctgcgcgaataccaagacctgctgaatgtcaagatggcgctcgacatcgagatcgccacctacaggaagctgctggaaggagaggagagcaggatttctctgcctcttccaaacttttcttccctgaacctgagggaaaccaatttggattcactccctctggttgacacccactcaaaaaggacacttctgattaagacggtggaaaccagagatggacaggttatcaacgaaacttcccagcatcacgatgatctggaataaaaacagcacatacttcgtgcagcaaaatactaccagcaagaaggaaaaaaaaaaaaatccatatcttaaagaaacagctttcaagtgcctttctgcagttttttcaggagcgcaagatagatttggaataggaataagccctagttcttgaaccgacacccataaaagatttagaaaaaagtttacaacataatctagtttactgaagacgccttgtgctagaatactttttaaaaagtatttttgaataccattaaaactgcttttttccatcaagtatctgaccaacttgtttctgcttcaataaat
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]