LOCUS       XM_067507819            2285 bp    mRNA    linear   VRT 20-AUG-2024
DEFINITION  PREDICTED: Channa argus ClpB family mitochondrial disaggregase
            (clpb), transcript variant X4, mRNA.
ACCESSION   XM_067507819
VERSION     XM_067507819.1
DBLINK      BioProject: PRJNA1148499
KEYWORDS    RefSeq.
SOURCE      Channa argus (northern snakehead)
  ORGANISM  Channa argus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Anabantaria; Anabantiformes; Channoidei;
            Channidae; Channa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_090202) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033026475.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/16/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Channa argus"
                     /mol_type="mRNA"
                     /isolate="prfri"
                     /db_xref="taxon:215402"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="muscle"
                     /dev_stage="adult"
                     /geo_loc_name="China: Weishanhu"
                     /collection_date="2021-12-20"
     gene            1..2285
                     /gene="clpb"
                     /note="ClpB family mitochondrial disaggregase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:137129033"
     CDS             222..2159
                     /gene="clpb"
                     /codon_start=1
                     /product="mitochondrial disaggregase isoform X4"
                     /protein_id="XP_067363920.1"
                     /db_xref="GeneID:137129033"
                     /translation="

MLSSVPTRLIARRSRSLSPCTRVLQTSASGTSCQGSSVTLAENNQNPIVSTSRVSRRGILAEEIASTGLTPSVQYHHLAPRWLSNMENRRRSWAALASRGRKNSRYWEESEEGEGRGTTGGTSRAAVATAGVLSAAAVAFCLKKDSGNKDALLEAARTNNSQDLASVVKILLEAGADLNAGDHFNNVYDTSREKGIHSLEVLVSREDEFSSRLSSRAGFRGCTALHYATLADDPRTVRMLLEAGANPLQTNGLGHTARAYAKDGEVSAVLKDWENKFQEAQAQQEAEERRRFPLERRLKEHIIGQEGAINTVASAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQVARYMHKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEEGGQLTKLLRASPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTSNVASDEIAQHALQLRQEAEEVSRRKLAENLEDVQKSDDIKISRQFKESVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELLQLVSRELNFWAKKAKQLHDITLQWDRPVLDLLAGGYNVHYGARSIKHEVERRVVNQLAAAYEQELLPKGCTLRLSVQSDGQEERSTPSLRLEVVGEDSSSRTLDIRPPLSPEH"

     misc_feature    <651..>1007
                     /gene="clpb"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    672..767
                     /gene="clpb"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    771..974
                     /gene="clpb"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    <1101..2057
                     /gene="clpb"
                     /note="ATP-dependent Clp protease, ATP-binding subunit
                     ClpA [Posttranslational modification, protein turnover,
                     chaperones]; Region: ClpA; COG0542"
                     /db_xref="CDD:440308"
     polyA_site      2285
                     /gene="clpb"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ccagaatgcaccgcgaattctagtgacatccacgctgcaatgaggtgaagcggttgttttcgtctcactggttttgatccgatggttactaagtgaggtacatctgcagttacattgggattaggattgtatctccggactgtatggccttcatttccctctgagattactgtcacactggggattacattgctcgcttcgttttcggtgagtttatcgccatgttatcgtctgttcccaccaggctaattgcgcgaaggtcgcgtagcctttctccatgcacacgcgttctccagaccagcgcaagcggtacctcatgccagggctctagtgtcacgctggcggagaacaaccaaaaccccatcgtgtccacttcccgggtctccagaagggggattttggctgaagaaatcgcgagtaccggtctgaccccgtcggtgcagtaccaccacctcgcccctagatggctgtccaacatggagaaccgccgcaggtcctgggcggcgctcgccagcagggggcgtaaaaacagtcggtactgggaggagagtgaagaaggtgagggtcgggggactactggaggaaccagcagggcagcagtggccactgccggtgtgctgtcggctgcagcagtggccttctgcctgaagaaagactctggtaacaaagatgctcttctggaggcagcaaggaccaacaacagtcaggatctggccagtgtggtgaagattctgcttgaagctggtgctgacctaaatgctggagatcactttaacaatgtttatgacacctcacgggagaaaggcatccactcactggaagttctggtttccagggaggatgaattcagcagcaggctcagcagcagggctggcttccgtggatgcacagcacttcattatgccaccctggctgatgacccacggactgtccgcatgctgctggaggctggtgccaaccccttgcagactaatggattgggacacacagcacgggcctatgctaaggatggagaagtgagtgcagtactgaaggactgggagaacaagtttcaggaggcacaagctcaacaagaggcagaggagaggaggaggtttcccttggagaggaggctgaaggagcacatcattggacaggagggggccatcaatactgtggcctcagccatcaggaggaaagagaatggttggtatgatgaagagcatcctcttgtattccttttcctcgggtcatcgggaatcggaaagacagagttggccaaacaggtggctcgctacatgcacaaggacattaaaaagggtttcatacgcatggacatgtctgagtttcaggaaaaacatgaggtggctaagttcattggttctccaccgggatatgtggggcatgaggaaggaggtcagctgaccaagttgttgagggcaagtcccaatgccgttgttctctttgatgaagtggacaaggcccatcctgatgtgcttactatcatgctgcagctttttgatgagggtcgtctcacagacggtaagggaaagaccatagaatgtaaagacgccatctttattatgacgtctaatgttgcaagtgatgaaatcgcccagcatgctctgcaactccgccaggaagcagaggaggtcagccgcagaaagctggccgaaaacctcgaggatgtacagaaaagtgacgacatcaaaatctccagacagtttaaagaatctgtgattcgaccaatactgaaggctcatttccggagggatgagttccttggtcggatcaatgaaattgtgtacttcttgccattttgtcactcagagctactacaactggtcagcagagagctcaacttctgggctaaaaaggctaagcagcttcatgacatcactcttcagtgggatcgtccagtgctggacctgttagcaggcgggtacaatgtgcattatggagcacgctccatcaaacacgaggttgaacgtcgggtcgtcaaccagttagctgcagcgtatgagcaggaactactacctaaaggctgcacgctgcgtctttctgtccaatcagatggccaagaggagcggagcacacccagtctacgccttgaggtggtaggagaggacagttcatcgagaacactggacatccgtccaccacttagccctgaacactaacaacagaaaatgaaacgcagaggatatacacaaatatgtacacatgcatcatcatcatcatccagcatcaggggagtgaatggttcttgatggatatttctaataaagtacctctgataacctcaa

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