LOCUS       XM_066170072            4233 bp    mRNA    linear   INV 28-JUN-2024
DEFINITION  PREDICTED: Pocillopora verrucosa systemic RNA interference
            defective protein 1-like (LOC131792185), mRNA.
ACCESSION   XM_066170072
VERSION     XM_066170072.1
DBLINK      BioProject: PRJNA1099672
KEYWORDS    RefSeq.
SOURCE      Pocillopora verrucosa
  ORGANISM  Pocillopora verrucosa
            Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia;
            Astrocoeniina; Pocilloporidae; Pocillopora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_089318) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036669915.1-RS_2024_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/25/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4233
                     /organism="Pocillopora verrucosa"
                     /mol_type="mRNA"
                     /isolate="sample1"
                     /isolation_source="Coral reefs"
                     /db_xref="taxon:203993"
                     /chromosome="7"
                     /tissue_type="Polyps"
                     /geo_loc_name="China: Spratly Islands"
                     /collection_date="2017-10-20"
     gene            1..4233
                     /gene="LOC131792185"
                     /note="systemic RNA interference defective protein 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 8 Proteins"
                     /db_xref="GeneID:131792185"
     CDS             6..2324
                     /gene="LOC131792185"
                     /codon_start=1
                     /product="systemic RNA interference defective protein
                     1-like"
                     /protein_id="XP_066026169.1"
                     /db_xref="GeneID:131792185"
                     /translation="

MAVAATLLPVLLLFPVYLLPFVTQANQLTVDCSFGEPDLASNLTMSAMVTGRLAASKYLSHLCVVKTSGSSHQKRFLQVKAKIVNSKSNGFLHASVYGADEPLLLGNLDVWKSRGDWSSLIICPSRDHNNNDQEKHLLFSGTPNHAFKVQVESSVSGIVLNKPLTFDLGPCESIKVFQFIPTEDISDKQLDVTVTSESDVPAYLKVSRDCEDVNENIDVVDYKGESIRLSFAKKGRITLSRVSIPPLTDSTSSWFIGIAIKNATGETPAEATKTVTLTLKRSFDYSYFWPISLLVVLSVVLGAAVACCGVCCFPIASSKEWTRIQLDDKPAQQTAPLTQTSQRKVGKEVPEGESGAEPDALAQATIPMQSDETTPLTQTSQTGVMEEFQDVMWNWFKRGPKTYSYITGIVGFVLMIGAGQFVFANWHLMIQEGDKDTCYYNDFCYRVSKYDDIPFNLMISNLAYMIHGLILAISVMYMEAKLFSRYRNSNDLPPKHAFSMGYAFAWALFFEGCFSLVYHLCPTKLTFQFDTGFMFVIAGLIVVLLYNGIEMKENPRKKGLVDAANFFLYFLVPLYIFNYFGTLSHSETGLVNAPAFFIFAAIWWISITFWTGRKLFADFSSYSDIKENPFKCFCFFIGFVLPFILCGFFSSNIPEAFLFTCIAECVIAIIGLGNARCNWEKIEPDAKRNGDWKYVFFQGLYIVIMVGLWGVAVFFFVSKATTDKSLTPEKSRDYNQDCILSIFDAHDVWHILSSHALLMSAYFVMFMSHKED"

     misc_feature    567..2306
                     /gene="LOC131792185"
                     /note="dsRNA-gated channel SID-1; Region: SID-1_RNA_chan;
                     pfam13965"
                     /db_xref="CDD:464057"
     polyA_site      4233
                     /gene="LOC131792185"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

taaacatggccgttgctgctacacttcttccagtactcctgctgttccctgtctacctcttgccctttgtaacacaagcaaaccagttaactgtcgattgctctttcggagagccagacttggcaagtaaccttacaatgtctgccatggttacaggcagacttgcagcttccaaatatctgagccacttatgtgttgtgaagacaagtggatcaagccatcaaaaacgcttcttgcaggtgaaagccaaaattgtgaacagcaaatcgaatggatttttgcatgcatcagtgtatggagcagatgaacccctcttactgggcaacttggatgtttggaaatcgagaggtgactggagttctctcatcatatgtccgtcacgtgaccacaataacaacgatcaagaaaaacatctgttattctcaggaacaccaaaccatgcttttaaagtgcaggtagaaagttctgtttcaggaatagtcctcaataaaccactgactttcgatttaggtccatgtgaatcaatcaaagtatttcagttcatcccaacagaagacatctcagacaagcagcttgacgtcactgtcacttctgaatctgacgtaccagcttacctaaaagtatcgcgtgactgtgaggatgtcaatgagaatattgacgttgtcgactataagggagagtcaattcgtttgtcttttgccaaaaagggacggattactttgtctagagtttctattccaccattgactgattccacctcaagctggtttattggaattgcaattaagaatgccacaggtgagactccagctgaggcgactaagactgtgacattaactttgaaaagatcatttgattattcctacttttggcctatatctcttttggtcgtgttgtcagtagtcctaggtgccgcggtggcgtgctgcggtgtttgctgctttccgatagcgtccagtaaagaatggacccgaatacaattggatgataaaccagctcaacaaacggcacctttaactcagacctcgcaaagaaaggtagggaaagaagtcccagaaggtgagtcgggcgcagaacctgatgcattagctcaagcaacgatacccatgcaatctgatgaaacaacacctttaactcagacctcgcaaacaggggtaatggaagaattccaagacgttatgtggaactggttcaaacgtggtcccaaaacatactcatacataactggtattgttggctttgtgttgatgattggtgcaggccagtttgttttcgccaactggcatttaatgatacaagaaggagacaaagacacttgttattacaatgacttttgttacagagtcagcaagtatgatgatattccattcaatttaatgattagtaacttagcatatatgattcatggcctaattctggctatctctgtgatgtatatggaggcaaaactattttctcgttatagaaatagtaatgatctccccccaaagcatgcgttttccatgggttatgcttttgcctgggctttattttttgaaggttgtttttcccttgtttatcatctctgtccaactaagctgacgtttcagtttgatacagggtttatgttcgtcattgcaggattgatcgttgttttgttgtacaatggaatcgaaatgaaagagaatccgagaaaaaagggattagttgacgcagccaatttcttcctttacttccttgtaccactgtacatttttaactactttggcacactgagtcattcagaaactgggctggttaacgctccggctttttttatttttgctgcaatttggtggatttcaattactttctggacgggtcggaaactattcgcagattttagttcatatagtgacataaaagaaaatccctttaagtgtttttgtttttttattggttttgttttaccattcattttatgtgggtttttttcaagcaatattcctgaagctttcttgtttacctgtattgcggaatgcgttattgctattatcggtctgggtaatgctcggtgcaactgggagaaaatcgaaccggatgcaaaacggaacggagactggaagtatgttttttttcaaggtctttatatcgtaatcatggttggtttgtggggtgtggctgtttttttttttgtttcaaaagcaacaacagataaatctcttactcctgaaaaatcaagagactataaccaagattgcattttgagcatttttgacgcccatgacgtctggcacattttatcatcccatgctcttcttatgtcagcgtattttgtcatgtttatgagtcacaaagaggattaaactgtcatgactcaaaatcaggaaatagaatccaaactgagaacaaaacttggaaaactgcagatgagaaggggaccgaacaaagaaaatatattctctcgaccaactgttatagtaacaaaatatttgaaaattggattttgacactgccgggtaaaggtccctttgaatttggaaaagctcacttaggacaaccagactctatctgtctatcatgtgtccctggttgttgtccctataacaacatataggttcaatgtaggtctgtgaatatatggcgccattaagttcagaacttagaagaaggagcatagtaatcacaggactcttttaaacatactttttaccgcaccaataagttatgttaggaagttttggaaaccacttagaaatttgaatattttttcatttagttgacctctcttttagccgatttgctattcagacaatcacttcaggacaataagtatttttgtttatctacagggggagttgtagtaatatatgctctgttaggtaaaatgtgtgaggtgatttgtgaggaggaaatacctcgaagtaaccgcatagtttcactttgtgctttgttcacaatatttcatcctggggaatttttacgcttatttagttcatgacatgattattcagttcgtgtcataggagttagtttaatctacagcacagtaaccctttaactcccatgggtgaccaagacagaatttctccttacaatatcaatacaatatcaagcagaaaagtgatgagaacaaagaaaaatattaattaggggattattggtggatccaataccaaatgctccgagctaacattgcaagaattatatggcagacagtaaggagaattactaatgagatcttgggagttaaaggttaattaaacaagcgtattgttaaacgataaaaatagaaatatatcttaactaaaaacattgtaagggtttcctatattggtgttggaaaatgaatggaaataatatattagcataagccattcagtaaacattgtaataagccggttggtcatttcttattccttttggaatcttacaggtagattttggttaccttttccttattatgatcgtgaatttgacatggagacagatgtttttgcgtaaactgcggtttgcggctagatatcgatatatttccataatgttgctaaaagatgactaattaccaagaaaatgactctactttataaaaaaattgatcctgtacaggaatttcctggaaataaccctcctttatacctttacctctaatactctcattttaaggctaaatccatgtcgaattcctgatgaggaaaatagttttagataaaatagtttttaaatttagtttagcacgttcgacacctctttttcttagaggtgacttaaggtgtaaacatgtagtacttttcatcttccgcgctgaatttgtaattagataacttctacggctagcacgtagctcttttaggggcggtaccttgggtacgccctttcctctccgaattttctgtttattctgccgtcatatcttcaagggctattttctcttaaaatatcttttcaaatatgattttattataattttcatattataaatcttgtttttgtttcgctcgaccttgaacgtaagacttagaaatttaaggtagaaagtcgttttgtaaagcgtaaacatcacgaaggtatctacttagtatgcgaactccgctatgcgtagtttagcgtgattcgctaattaagtgtaaaagcatgacgaaggttagagattgacagctcagtaagtgtcacctgcataagcggtgacccacactttcctagtgagatcagagctagtccccgttgtaatgccttgagtagtaagagtgaataaagaaagagacaaccaaacaa

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