2025-04-23 20:26:55, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_064492668 1790 bp mRNA linear MAM 12-APR-2024 DEFINITION PREDICTED: Camelus dromedarius ClpB family mitochondrial disaggregase (CLPB), transcript variant X2, mRNA. ACCESSION XM_064492668 VERSION XM_064492668.1 DBLINK BioProject: PRJNA1097981 KEYWORDS RefSeq. SOURCE Camelus dromedarius (Arabian camel) ORGANISM Camelus dromedarius Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_087447) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036321535.1-RS_2024_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/10/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1790 /organism="Camelus dromedarius" /mol_type="mRNA" /isolate="mCamDro1" /db_xref="taxon:9838" /chromosome="12" /sex="male" /tissue_type="blood" /dev_stage="adult" /geo_loc_name="Qatar: Mr. Shabat bin Saqar Al-Muraikhi camel breeding farm" /lat_lon="25.27881495 N 51.50256842 E" /collection_date="2022-02-17" /collected_by="Rasheed Hashim, Farooq Omar Al-Ajli" gene 1..1790 /gene="CLPB" /note="ClpB family mitochondrial disaggregase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins" /db_xref="GeneID:105096753" CDS 105..1724 /gene="CLPB" /codon_start=1 /product="mitochondrial disaggregase isoform X2" /protein_id="XP_064348738.1" /db_xref="GeneID:105096753" /translation="
MEAARTNNVQEVSRLLSEGADVNARHRLGWTALMVAAINRNDSIVRVLLAAGADPNLGDDFTSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGASPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSHNRIAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDSDKQLLKSPELPSPQAEKRPPKLRLEIIDKDSKTHKLDIQAPLHPEKVCHTL"
polyA_site 1790 /gene="CLPB" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
gttgggttccagaacgtctgcaccaatctgttctcaactggcaatgtgaatagtgttttcctcagaagaatggtctccaactctactctggagatgcagccctgatggaagctgctcgcaccaacaatgtccaagaagtcagcagactgttgtcagaaggtgcagatgtcaacgcaaggcacagactcggctggacagcactcatggtggcagccatcaaccgaaacgacagtatagtgcgggtcctgcttgctgctggtgctgacccaaaccttggggatgatttcaccagtgtttacaagaccgccaaggaacagggaatccattctttagaagtcctggtcaccagggaggatgacttcaacaaccggctgaacaaccgagccagcttcaagggctgcacagccctgcactatgctgtccttgccgatgactaccgcaccgtcaaggagctgcttgatggaggagccagtcccctgcagaggaatgaaatgggacacacacctttggattatgctcgagaaggggaggtgatgaagcttttaagaacttctgaggccaagtaccaggagaagcagcggaagcgcgaggccgaggagcggcgccgctttcctctggagcagcggctaaaggagcacatcattggccaggagagtgccatcgccacggtgggtgctgcgatccggaggaaggagaatggctggtacgatgaagaacaccctctggtcttcctcttcttgggatcatctggaataggaaaaactgaactggccaagcagacagccaaatatatgcacaaagatgccaaaaagggtttcatcaggctagacatgtctgagttccaggagcggcatgaggtggccaagtttatcgggtccccaccaggctacatcggccacgaggagggtggccagctgacgaaaaagctgaagcagtgccccaacgccgtggtgctcttcgatgaggtggacaaggcccatccagatgtgctcaccatcatgttgcagctgtttgatgagggccggctaacagatggaaaagggaagaccatcgactgcaaggacgccatcttcatcatgacctccaacgtggccagcgacgagattgcacagcatgcgctccagctgaggcaggaggctttggagatgagtcataaccggatagctgagaaccttggggatgtccagattagtgacaagatcaccatctcaaagaacttcaaggagaatgtgattcgccccatcctgaaagctcacttccgaagggatgagtttctgggacggatcaatgaaatcgtctacttcctccccttctgccactcagagctcatccaactcgtcaacaaggaactgaacttctgggccaagagagccaagcaaaggcacaacatcacactactctgggaccgcgaggtggcggatgtgttggtcgacggctacaacgtgcactatggcgcccgctccatcaagcatgaggtggagcgccgtgtagtgaaccagctggcagctgcctatgagcaggacttgctgccagggggctgcacgctacgcatcactgtcgaggactcagacaagcagctactcaagagccctgaactgccctcaccccaggccgagaagcggccacccaagctgcggctggagatcatcgataaggacagcaagacccacaaactggacatacaggcaccactacaccctgagaaggtgtgccacaccctctagcatctgcctacctgcctatatgtgccctcaacacccaataaaagcccctcggctgtagcatggtaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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