LOCUS       XM_057839409            1530 bp    mRNA    linear   VRT 16-MAY-2024
DEFINITION  PREDICTED: Corythoichthys intestinalis claudin-3-like
            (LOC130917744), mRNA.
ACCESSION   XM_057839409
VERSION     XM_057839409.1
DBLINK      BioProject: PRJNA989181
KEYWORDS    RefSeq.
SOURCE      Corythoichthys intestinalis (scribbled pipefish)
  ORGANISM  Corythoichthys intestinalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei;
            Syngnathidae; Corythoichthys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_080400) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_030265065.1-RS_2024_05
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 05/15/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Corythoichthys intestinalis"
                     /mol_type="mRNA"
                     /isolate="RoL2023-P3"
                     /db_xref="taxon:161448"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="body"
                     /dev_stage="adult"
                     /geo_loc_name="Philippines"
     gene            1..1530
                     /gene="LOC130917744"
                     /note="claudin-3-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 153 Proteins"
                     /db_xref="GeneID:130917744"
     CDS             72..1283
                     /gene="LOC130917744"
                     /codon_start=1
                     /product="claudin-3-like"
                     /protein_id="XP_057695392.1"
                     /db_xref="GeneID:130917744"
                     /translation="

MVSQGVQMIGISSATVGWFMVIVTCALPMWKVTAFVGANIITAQTIWQGLWMNCVVQSTGQMQCKVYDSMLALERDLQAARAMIIISILLGVFGVAMSVAGGKCTNCIREEVPKARACILAGALFLASGLLCLIPVSWSANAIVSNFYNPLVIPAQRFDLSVMGRIGKETAGQVIGFIGLVGVAVTTGIPMWRVTTFIGANIVTGQIVWDGLWMNCVMQSTGQMQCRLSESVITLTPDLQAARALVIISLVFGFIGFMVTFIGAKCTSCLQQDASKARVVIIGGVLLIIAAVLVLIPVTWSATITITDFQNPLTVDTQRREIGASIYIGWASTALLLVGGIILTTSCPPQTPMYPYAAYPYANGSTYAPVYAPPSSQPYTPSGSYYPAKPYAAPSGYSPRQYI"

     misc_feature    84..524
                     /gene="LOC130917744"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:473919"
     misc_feature    591..1100
                     /gene="LOC130917744"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:473919"
ORIGIN      

gtcacggcttttctctcattctgagacaaactcgggagagagctcacgtctttttcacctagccacgcaaaatggtttctcagggcgttcagatgatcggcatatcttcggccaccgtcggctggttcatggtgattgtgacgtgtgctttgcccatgtggaaggtgacggccttcgtaggggccaacatcattacggcgcagaccatctggcagggattgtggatgaactgcgtggtgcagagtacgggacagatgcagtgcaaggtgtacgactccatgctggcgctggagcgagacctgcaggccgcccgcgccatgatcatcatctccatcctgctgggcgttttcggcgtcgccatgtccgtcgcgggcggcaagtgcaccaactgcatccgggaggaagttcccaaagcccgggcgtgcatcttggccggcgcactcttcctggcgtccggccttttgtgcctgattcccgtgtcgtggtcggccaacgccatcgtcagcaacttctacaacccactggtcatcccggcccagcgcttcgacctctcagtcatggggagaattggcaaggagacggcgggtcaggtcatcggcttcatcggtctggtgggggtggcggtcaccaccggcatccccatgtggagggtgaccaccttcatcggcgccaacatcgtgacgggccagatcgtgtgggacggcctgtggatgaactgcgtcatgcagagcaccggccaaatgcagtgtcgcctcagcgaatctgttataacgttaacccctgatctccaagcggcgcgagcgctagtcatcatctcgctggtttttggattcatcggcttcatggtcacgttcatcggcgccaaatgcaccagctgcctccagcaagacgcctccaaggccagagtggtgatcatcggtggggttttgctcatcatcgctgccgttttagtcctcattcccgtcacctggtcggcgaccatcaccatcaccgactttcagaacccgttgaccgtcgacacgcagagacgagagataggagcgtctatctacatcggttgggcgtccaccgccctcctcctggtaggggggatcatcctcaccacttcctgtccaccgcagacgcccatgtacccttacgccgcctacccgtatgctaacggttccacctacgcgccggtttacgcgccgccatccagccagccgtacacgccgagcgggtcgtactatcccgccaaaccgtacgcggcgccatccggatactcgccgagacagtacatttgaaaggactgaatggaactgcattcaaattcacggataatgtgctatggtagttagtaaagcagtaaaacgtgaacgttcactgccagagctagcggttgaaaatgattggaccgtgattgtttcgtcagcatgcgtgtttgcaccggagtttaacattgttgagaattaactccttttttttttaggtttaattgcgctgattttttgtaaataactcaatgtgttaataaataatgaaaaaatacta

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