2025-02-22 17:38:22, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_050991709 7328 bp mRNA linear INV 04-OCT-2022 DEFINITION PREDICTED: Vespula vulgaris platelet binding protein GspB-like (LOC127062849), transcript variant X5, mRNA. ACCESSION XM_050991709 VERSION XM_050991709.1 DBLINK BioProject: PRJNA885043 KEYWORDS RefSeq. SOURCE Vespula vulgaris ORGANISM Vespula vulgaris Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Vespinae; Vespula. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_066588) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: Vespula vulgaris Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7328 /organism="Vespula vulgaris" /mol_type="mRNA" /db_xref="taxon:7454" /chromosome="3" gene 1..7328 /gene="LOC127062849" /note="platelet binding protein GspB-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 Proteins" /db_xref="GeneID:127062849" CDS 63..7106 /gene="LOC127062849" /codon_start=1 /product="platelet binding protein GspB-like isoform X5" /protein_id="XP_050847666.1" /db_xref="GeneID:127062849" /translation="
MKILVSSLLFLVVSTTALSIQPNRVDLRRNSPINTISKIEASLGIRAQGKGAVNSGQSTAAHGGSSAVVNIGINAGGKGGVNSGKNTGAYAGSNVNAKIGLGAVVGAGVNSGKNTGAYGGSNANAKIGVATAVGAGVNSGKNTGSHGGSNANAKIGVATAVGAGVNSGKNTGSHGGSNANAKIGVATAVGAGVNSGKNTGSHGGSNANAKIGVATAVGAGVNSGKNTGGHGGSNVNAKIGIGAAGGVNARGDSKAGLGIYAGVHGGSHARADLGIKGGINAAGHGRSGSNTGANVNAGINVRTKEGSSAKASIGINAGVNVGAHGRSNAGAKIGINTRVHAGDNRGSKAGANLGISAGLHTRWNLPSQEHNQHKNHHESHLSYIPSFHNLPKLPHIPLPHIPLPHIPLPHIPFPPFHFWSTSTTSTTTEKPCESESTSSSTSKHPIETSSSSASPSSSSPKQPSVAPSSSASPSSFNSEQPSEAPSSSVSPSSESTPCEEPSKAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSAAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSAAPSSSASPSPSSSERPSEEPSSSASPSSSSSEKPSEAPSSPASPSSSSSEQPSEASSSSASPNSESTPCEEPSEAPSSSASPSSTSSEQPSEASSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEATSSSASPSPSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSAAPNSESTPCEEPSEASSSSASHSSTSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSAAPNSESTPCEEPSEAPSSSASPSSTSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSAAPNSESTPCEEPSEAPSSSASPSSTSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSAAPNSESTPCEEPSEAPSSSASPSSTSSEQLSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSTSSFEQPSEAPSSSASPSSSSPEQPSEAPSSSASPISESTPCEESSKAPSSSASPSTSSSEQPSEAPSSSTSPSPSSSEQPSEEPSSSTSPSSSSSEQPSVTPSSSASPSSESTPCEDPSEAPSSSASPSSSSSEQPSEAPSSSASPNSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSVAPSSSASPSSSSSEQPSEAPSSSASPSSESTPCEEPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSDQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSESTPCEEPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSDQPSEAPSSSASPSSSSSEQPSEAPSSSTSPSSESTPCEEPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSDQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSESTPCEEPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSVSPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPTEAPSSSASPSSSSSEQPSEAPSSSAAPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSESTPCEEPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPTSSSSEQPSVGPSSSPSPSSDSTPCDESSEGPSSSGSPSSSSSPQPSGAPSSSASPSTDSTPWTPSTGVPYHFTNPAGRHCICY"
misc_feature <183..>1136 /gene="LOC127062849" /note="Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown]; Region: COG4625" /db_xref="CDD:443664" polyA_site 7328 /gene="LOC127062849" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
agagtataaatatcacgcatgaagtctcaaaattgtgaaagtggaataggaaacaagcgatcatgaagatactcgtgtcctctctactcttccttgtggtttctaccacggccctctcgatacaaccaaatcgagtggatctaagaagaaattcaccaataaatacaataagcaaaattgaagcaagtctaggaataagagcacaaggaaaaggagcagtgaattcaggacagagtacagcagcgcatggaggatcaagtgcagtcgttaacataggaataaatgcaggaggaaaaggaggagtgaattcgggaaagaatacaggagcgtatgcaggatcaaatgtaaacgcaaaaataggattaggtgcagtagtaggagcaggagtgaattcaggaaagaatacaggagcgtatggaggatcaaatgcaaacgctaaaataggagtagctacagcagtaggagcaggagtgaattcaggaaagaatacaggatcgcatggaggatcaaatgcaaacgctaaaataggagtagctacagcagtaggagcaggagtgaattcaggaaagaatacaggatcgcatggaggatcaaatgcaaacgctaaaataggagtagctacagcagtaggagcaggagtgaattcaggaaagaatacaggatcgcatggaggatcaaatgcaaacgctaaaataggagtagctacagcagtaggagcaggagtgaattcaggaaagaatacaggagggcatggaggatcaaatgtaaacgctaaaataggaataggtgcagcaggaggagtaaatgcgagaggagactcaaaagctggtctaggaatatatgcaggagtacatggaggatcacatgcaagagctgatttaggaataaagggaggaataaatgcagcaggacatggacgatcaggttcaaacactggtgcaaatgtaaatgcaggaataaatgtgagaacgaaagaaggatcaagtgcaaaagctagtataggaataaatgcaggagtaaatgtgggagcgcatggaagatcaaatgcaggagctaaaataggaataaacacaagagtacatgcgggagataatagaggatcaaaagcaggagcaaatctaggaataagtgcaggtctacatacaagatggaaccttccctctcaagaacataaccaacacaaaaaccatcatgaatctcatttatcttacattcccagtttccataatctacccaaattaccacatataccattaccacatataccattgccacatataccattacctcatataccatttccacctttccacttttggtccactagcactacttctactactactgaaaaaccatgtgaatctgagtctactagctcttctacttctaaacatccaattgaaacatcgagtagctctgcatcgcctagttcttccagtcccaaacaaccaagcgtagcaccaagcagctcagcctcgcctagttccttcaactctgaacaacccagtgaagcacctagtagttcggtctcaccaagttctgaatctaccccttgtgaagaaccaagcaaagcacccagcagctctgcctcaccaagttcttcaagttctgaacaacctagtgaagcacctagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgcagcacccagcagctctgcctcaccaagttcttcaagttctgaacaacctagtgaagcacctagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgcagcacccagcagctctgcctcaccaagtccttccagttctgaacgacctagtgaagaacccagcagttctgcctcacctagttcttccagttctgaaaaacccagtgaagcacccagcagccctgcctcgcctagttcttccagttctgaacaaccaagtgaagcatctagtagttcggcctcaccaaattcggaatctactccttgtgaagaaccaagcgaagcacccagcagctctgcctcgcctagttctaccagttctgaacaacctagtgaagcatccagcagctctgcctcgcctagttcttccagttctgaacagcccagtgaagcacccagcagctctgcctcgcctagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcgcctagttcttccagttctgaacaaccaagtgaagcaaccagcagttctgcctcaccaagtccttcaagttcagaacaaccaagcgaagcaccaagcagctctgcctcgccaagtccttccagttcagaacaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagtgaagcacctagtagttcggccgcaccaaattcggaatctactccttgtgaagaaccaagcgaagcatctagcagctctgcctcgcatagttctactagttctgaacaacccagtgaagcacccagcagctctgcctcgcctagttcttccagttctgaacaacccagtgaagcacccagcagttctgcctcacccagtccttccagttcagagcaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagttctgaacaacccagtgaagcaccaagcagctctgcctcaccaagctcttctagttctgaacaaccaagcgaagcacccagcagttctgcctcaccaagtccttccagttcagaacaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagtgaagcacctagtagttcggccgcaccaaattcggaatctactccttgtgaagaaccaagcgaagcacctagcagctctgcctcgcccagttctactagttctgaacaacccagtgaagcacccagcagctctgcctcgcctagttcttccagttctgaacagcccagtgaagcacccagcagctctgcctcgccaagctcttccagttctgaacaaccaagcgaagcacccagcagttctgcctcaccaagtccttccagttcagaacaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagtgaagcacctagtagttcggccgcaccaaattcggaatctactccttgtgaagaaccaagcgaagcacctagcagctctgcctcgcccagttctactagttctgaacaacccagtgaagcacccagcagctctgcctcgcctagttcttccagttctgaacagcccagtgaagcacccagcagctctgcctcgccaagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcgccaagttcttccagttctgaacaacccagtgaagcacccagcagctcggcctcgcctagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcaccaagctcttccagttctgaacaaccaagcgaagcacccagcagttctgcctcaccgagtccttccagttcagaacaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagtgaagcacctagtagttcggccgcaccaaattcggaatccactccttgtgaagaaccaagcgaagcacctagcagctctgcctcgcctagttctactagttctgaacaactcagtgaagcacccagcagctctgcctcgcccagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcaccaagctcttccagttctgaacaaccaagcgaagcacccagcagttctgcctcaccaagctcttccagttctgaacaacccagtgaagcacccagcagctctgcctcgccaagttcttccagttctgaacaacccagtgaagcacccagcagctcggcctcgcctagttcttccagttctgaacaacccagtgaagcacccagcagttctgcctcaccaagtccttccagttcagaacaaccaagcgaagcaccaagcagctctgcctcacctagtacttccagttttgaacaacccagtgaagcacccagcagctctgcctcgcctagttcttcgagtcctgaacaacccagtgaagcacctagtagctctgcctcgccaatttctgaatctactccttgtgaagaatcaagcaaagcacccagcagttctgcttcaccaagtacttccagttctgaacaaccaagtgaagcacccagcagctctacttcacctagtccttccagttctgaacaacctagtgaagaacccagcagctctacctcgcctagttcttccagttctgaacaaccgagcgtaacacctagtagttcggcctcaccaagttctgaatctaccccttgtgaagatccgagcgaagcacccagcagctcggcttcaccaagttcttccagttctgaacaacccagtgaagcaccaagcagctctgcctcacctaattcttccagttctgaacaacccagtgaagcaccaagcagctctgcctcacctagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcgccaagttcttctagttctgaacaaccgagcgtagcacctagtagttctgcctcaccaagttcttccagttctgaacaaccaagtgaagcacccagcagctctgcctcaccaagttctgaatctaccccttgtgaagaaccaagcgaagctcccagtagctcggcctcaccaagttcctccagttctgaacaaccaagtgaagcacccagcagctctgcctctccaagttcttccagttccgatcaaccaagcgaagctcccagtagctctgcctcaccaagttcttctagttctgaacaacctagtgaagcacccagcagctctgcctcaccaagttctgaatctaccccttgtgaagaaccaagcgaagcacccagcagctctgcctcgcctagttcttccagttctgaacagcccagtgaagcacccagcagctctgcctcgccaagttcttccagttctgaacaacccagtgaagcacccagcagctcggcctcgcctagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcaccaagctcttccagttctgaacaaccaagcgaagcacccagcagttctgcctcaccaagtccttccagttctgaacaaccaagcgaagcacccagcagctctgcctcacctagttcttccagttctgaacaaccaagtgaagcacccagcagctctgcctcaccaagttcttccagttccgatcaaccaagcgaagctcccagtagctctgcctcaccaagttcttccagttctgaacaaccaagtgaagcacccagcagctctacctcaccaagttctgaatctaccccttgtgaagaaccaagcgaagcacccagcagctctgcctcgcctagttcttccagttctgagcagcccagtgaagcacccagcagctctgcctcgccaagttcttccagttctgaacaacccagtgaagcacccagcagctcggcctcgcctagttcttccagttccgatcaaccaagcgaagctcccagtagctctgcctcaccaagttcttccagttctgaacaaccaagtgaagcacccagcagctctgcctcaccaagttctgaatctaccccttgtgaagaaccaagcgaagcacccagcagctctgcctcgcctagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcgcctagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcaccaagctcttccagttctgaacaaccaagcgaagcacccagcagttctgtctcaccaagctcttccagttctgaacaaccaagcgaagcacccagcagttctgcctcaccaagtccttccagttctgaacaaccaagcgaagcacccagcagctctgcctcaccaagctcttccagttctgaacaaccaagcgaagcacccagcagttctgcctcaccaagtccttccagttctgaacaaccaagcgaagcacccagcagttctgcctcaccaagctcttccagttctgaacaaccaagcgaagcacccagcagttctgcctcaccaagtccttccagttctgaacaaccaagcgaagcacccagcagttctgcctcgcctagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcaccaagctcttccagttctgaacaaccaagcgaagcacccagcagttctgcctcaccaagctcttccagttctgagcaaccaagcgaagcaccaagcagctcggcctcgcctagttcctccagttctgaacaaccaactgaagcacccagcagctctgcctcgcctagttcttccagttctgaacaaccaagtgaagctcccagtagctctgccgcgcctagttcttccagttctgaacaaccaagtgaagctcccagtagctctgcctcaccaagttcttccagttctgaacaaccaagtgaagcacccagcagctctgcctcaccaagttctgaatctaccccttgtgaagaaccaagcgaagcacccagcagctcggcctcgcctagttcttccagttctgaacaaccaagcgaagcacccagcagctctgcctcacctagttcttccagttctgagcaaccaagcgaagctcccagcagctctgcctcaccaacttcttccagttctgaacaacctagtgtaggacctagtagttcgccctcaccaagttctgactctactccttgtgatgaatcaagcgaaggaccaagcagttctggctcccctagttcttccagttctccccaaccgagcggagcaccaagtagttctgcctcaccaagtactgattccaccccttggaccccatcgactggtgtaccttaccactttacgaatcctgccggtcgacattgcatttgctattgatttttaaaattatgtgaaattatttaatccggctcaatactatttcaaattgacacaaattgtttgtgtctgtccaaaatgtaattaattactaaaaatattattaattatcaagtgacttaatttatgatgggttctctccgtaaattaagcccaactattattttatcaaaataaaatattggagcaaatgaatcaatatatccaaaaattcatatcaga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]