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2025-02-22 17:59:24, GGRNA.v2 : RefSeq release 228 (Jan, 2025)

LOCUS       XM_050991705            7334 bp    mRNA    linear   INV 04-OCT-2022
DEFINITION  PREDICTED: Vespula vulgaris platelet binding protein GspB-like
            (LOC127062849), transcript variant X2, mRNA.
ACCESSION   XM_050991705
VERSION     XM_050991705.1
DBLINK      BioProject: PRJNA885043
KEYWORDS    RefSeq.
SOURCE      Vespula vulgaris
  ORGANISM  Vespula vulgaris
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
            Aculeata; Vespoidea; Vespidae; Vespinae; Vespula.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_066588) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: Vespula vulgaris Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7334
                     /organism="Vespula vulgaris"
                     /mol_type="mRNA"
                     /db_xref="taxon:7454"
                     /chromosome="3"
     gene            1..7334
                     /gene="LOC127062849"
                     /note="platelet binding protein GspB-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 67 Proteins"
                     /db_xref="GeneID:127062849"
     CDS             63..7112
                     /gene="LOC127062849"
                     /codon_start=1
                     /product="platelet binding protein GspB-like isoform X2"
                     /protein_id="XP_050847662.1"
                     /db_xref="GeneID:127062849"
                     /translation="
MKILVSSLLFLVVSTTALSIQPNRVDLRRNSPINTISKIEASLGIRAQGKGAVNSGQSTAAHGGSSAVVNIGINAGGKGGVNSGKNTGAYAGSNVNAKIGLGAVVGAGVNSGKNTGAYGGSNANAKIGVATAVGAGVNSGKNTGSHGGSNANAKIGVATAVGAGVNSGKNTGSHGGSNANAKIGVATAVGAGVNSGKNTGSHGGSNANAKIGVATAVGAGVNSGKNTGGHGGSNVNAKIGIGAAGGVNARGDSKAGLGIYAGVHGGSHARADLGIKGGINAAGHGRSGSNTGANVNAGINVRTKEGSSAKASIGINAGVNVGAHGRSNAGAKIGINTRVHAGDNRGSKAGANLGISAGLHTRWNLPSQEHNQHKNHHESHLSYIPSFHNLPKLPHIPLPHIPLPHIPLPHIPFPPFHFWSTSTTSTTTEKPCESESTSSSTSKHPIETSSSSASPSSSSPKQPSVAPSSSASPSSFNSEQPSEAPSSSVSPSSESTPCEEPSKAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSAAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSAAPSSSASPSPSSSERPSEEPSSSASPSSSSSEKPSEAPSSPASPSSSSSEQPSEASSSSASPNSESTPCEEPSEAPSSSASPSSTSSEQPSEASSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEATSSSASPSPSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSAAPNSESTPCEEPSEASSSSASHSSTSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSAAPNSESTPCEEPSEAPSSSASPSSTSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSAAPNSESTPCEEPSEAPSSSASPSSTSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSAAPNSESTPCEEPSEAPSSSASPSSTSSEQLSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSTSSFEQPSEAPSSSASPSSSSPEQPSEAPSSSASPISESTPCEESSKAPSSSASPSTSSSEQPSEAPSSSTSPSPSSSEQPSEEPSSSTSPSSSSSEQPSVTPSSSASPSSESTPCEDPSEAPSSSASPSSSSSEQPSEAPSSSASPNSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSVAPSSSASPSSSSSEQPSEAPSSSASPSSESTPCEEPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSDQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSESTPCEEPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSDQPSEAPSSSASPSSSSSEQPSEAPSSSTSPSSESTPCEEPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSDQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSESTPCEEPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSVSPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSPSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPTEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSESTPCEEPSEAPSSSASPSSESTPCEEPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPTSSSSEQPSVGPSSSPSPSSDSTPCDESSEGPSSSGSPSSSSSPQPSGAPSSSASPSTDSTPWTPSTGVPYHFTNPAGRHCICY"
     misc_feature    <183..>1136
                     /gene="LOC127062849"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown];
                     Region: COG4625"
                     /db_xref="CDD:443664"
     polyA_site      7334
                     /gene="LOC127062849"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
agagtataaatatcacgcatgaagtctcaaaattgtgaaagtggaataggaaacaagcgatcatgaagatactcgtgtcctctctactcttccttgtggtttctaccacggccctctcgatacaaccaaatcgagtggatctaagaagaaattcaccaataaatacaataagcaaaattgaagcaagtctaggaataagagcacaaggaaaaggagcagtgaattcaggacagagtacagcagcgcatggaggatcaagtgcagtcgttaacataggaataaatgcaggaggaaaaggaggagtgaattcgggaaagaatacaggagcgtatgcaggatcaaatgtaaacgcaaaaataggattaggtgcagtagtaggagcaggagtgaattcaggaaagaatacaggagcgtatggaggatcaaatgcaaacgctaaaataggagtagctacagcagtaggagcaggagtgaattcaggaaagaatacaggatcgcatggaggatcaaatgcaaacgctaaaataggagtagctacagcagtaggagcaggagtgaattcaggaaagaatacaggatcgcatggaggatcaaatgcaaacgctaaaataggagtagctacagcagtaggagcaggagtgaattcaggaaagaatacaggatcgcatggaggatcaaatgcaaacgctaaaataggagtagctacagcagtaggagcaggagtgaattcaggaaagaatacaggagggcatggaggatcaaatgtaaacgctaaaataggaataggtgcagcaggaggagtaaatgcgagaggagactcaaaagctggtctaggaatatatgcaggagtacatggaggatcacatgcaagagctgatttaggaataaagggaggaataaatgcagcaggacatggacgatcaggttcaaacactggtgcaaatgtaaatgcaggaataaatgtgagaacgaaagaaggatcaagtgcaaaagctagtataggaataaatgcaggagtaaatgtgggagcgcatggaagatcaaatgcaggagctaaaataggaataaacacaagagtacatgcgggagataatagaggatcaaaagcaggagcaaatctaggaataagtgcaggtctacatacaagatggaaccttccctctcaagaacataaccaacacaaaaaccatcatgaatctcatttatcttacattcccagtttccataatctacccaaattaccacatataccattaccacatataccattgccacatataccattacctcatataccatttccacctttccacttttggtccactagcactacttctactactactgaaaaaccatgtgaatctgagtctactagctcttctacttctaaacatccaattgaaacatcgagtagctctgcatcgcctagttcttccagtcccaaacaaccaagcgtagcaccaagcagctcagcctcgcctagttccttcaactctgaacaacccagtgaagcacctagtagttcggtctcaccaagttctgaatctaccccttgtgaagaaccaagcaaagcacccagcagctctgcctcaccaagttcttcaagttctgaacaacctagtgaagcacctagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgcagcacccagcagctctgcctcaccaagttcttcaagttctgaacaacctagtgaagcacctagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgcagcacccagcagctctgcctcaccaagtccttccagttctgaacgacctagtgaagaacccagcagttctgcctcacctagttcttccagttctgaaaaacccagtgaagcacccagcagccctgcctcgcctagttcttccagttctgaacaaccaagtgaagcatctagtagttcggcctcaccaaattcggaatctactccttgtgaagaaccaagcgaagcacccagcagctctgcctcgcctagttctaccagttctgaacaacctagtgaagcatccagcagctctgcctcgcctagttcttccagttctgaacagcccagtgaagcacccagcagctctgcctcgcctagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcgcctagttcttccagttctgaacaaccaagtgaagcaaccagcagttctgcctcaccaagtccttcaagttcagaacaaccaagcgaagcaccaagcagctctgcctcgccaagtccttccagttcagaacaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagtgaagcacctagtagttcggccgcaccaaattcggaatctactccttgtgaagaaccaagcgaagcatctagcagctctgcctcgcatagttctactagttctgaacaacccagtgaagcacccagcagctctgcctcgcctagttcttccagttctgaacaacccagtgaagcacccagcagttctgcctcacccagtccttccagttcagagcaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagttctgaacaacccagtgaagcaccaagcagctctgcctcaccaagctcttctagttctgaacaaccaagcgaagcacccagcagttctgcctcaccaagtccttccagttcagaacaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagtgaagcacctagtagttcggccgcaccaaattcggaatctactccttgtgaagaaccaagcgaagcacctagcagctctgcctcgcccagttctactagttctgaacaacccagtgaagcacccagcagctctgcctcgcctagttcttccagttctgaacagcccagtgaagcacccagcagctctgcctcgccaagctcttccagttctgaacaaccaagcgaagcacccagcagttctgcctcaccaagtccttccagttcagaacaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagtgaagcacctagtagttcggccgcaccaaattcggaatctactccttgtgaagaaccaagcgaagcacctagcagctctgcctcgcccagttctactagttctgaacaacccagtgaagcacccagcagctctgcctcgcctagttcttccagttctgaacagcccagtgaagcacccagcagctctgcctcgccaagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcgccaagttcttccagttctgaacaacccagtgaagcacccagcagctcggcctcgcctagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcaccaagctcttccagttctgaacaaccaagcgaagcacccagcagttctgcctcaccgagtccttccagttcagaacaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagtgaagcacctagtagttcggccgcaccaaattcggaatccactccttgtgaagaaccaagcgaagcacctagcagctctgcctcgcctagttctactagttctgaacaactcagtgaagcacccagcagctctgcctcgcccagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcaccaagctcttccagttctgaacaaccaagcgaagcacccagcagttctgcctcaccaagctcttccagttctgaacaacccagtgaagcacccagcagctctgcctcgccaagttcttccagttctgaacaacccagtgaagcacccagcagctcggcctcgcctagttcttccagttctgaacaacccagtgaagcacccagcagttctgcctcaccaagtccttccagttcagaacaaccaagcgaagcaccaagcagctctgcctcacctagtacttccagttttgaacaacccagtgaagcacccagcagctctgcctcgcctagttcttcgagtcctgaacaacccagtgaagcacctagtagctctgcctcgccaatttctgaatctactccttgtgaagaatcaagcaaagcacccagcagttctgcttcaccaagtacttccagttctgaacaaccaagtgaagcacccagcagctctacttcacctagtccttccagttctgaacaacctagtgaagaacccagcagctctacctcgcctagttcttccagttctgaacaaccgagcgtaacacctagtagttcggcctcaccaagttctgaatctaccccttgtgaagatccgagcgaagcacccagcagctcggcttcaccaagttcttccagttctgaacaacccagtgaagcaccaagcagctctgcctcacctaattcttccagttctgaacaacccagtgaagcaccaagcagctctgcctcacctagttcttccagttctgaacaacccagtgaagcacccagcagctctgcctcgccaagttcttctagttctgaacaaccgagcgtagcacctagtagttctgcctcaccaagttcttccagttctgaacaaccaagtgaagcacccagcagctctgcctcaccaagttctgaatctaccccttgtgaagaaccaagcgaagctcccagtagctcggcctcaccaagttcctccagttctgaacaaccaagtgaagcacccagcagctctgcctctccaagttcttccagttccgatcaaccaagcgaagctcccagtagctctgcctcaccaagttcttctagttctgaacaacctagtgaagcacccagcagctctgcctcaccaagttctgaa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//

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]