2025-02-22 17:32:10, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_049016968 2115 bp mRNA linear VRT 12-JUL-2022 DEFINITION PREDICTED: Brienomyrus brachyistius nascent polypeptide-associated complex subunit alpha, muscle-specific form-like (LOC125744763), mRNA. ACCESSION XM_049016968 VERSION XM_049016968.1 DBLINK BioProject: PRJNA854133 KEYWORDS RefSeq; includes ab initio. SOURCE Brienomyrus brachyistius ORGANISM Brienomyrus brachyistius Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Mormyridae; Brienomyrus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_064533) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: Brienomyrus brachyistius Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..2115 /organism="Brienomyrus brachyistius" /mol_type="mRNA" /isolate="T26" /db_xref="taxon:42636" /chromosome="1" /sex="male" /tissue_type="skeletal muscle" gene 1..2115 /gene="LOC125744763" /note="nascent polypeptide-associated complex subunit alpha, muscle-specific form-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:125744763" CDS 1..2115 /gene="LOC125744763" /codon_start=1 /product="nascent polypeptide-associated complex subunit alpha, muscle-specific form-like" /protein_id="XP_048872925.1" /db_xref="GeneID:125744763" /translation="
MQPISLEPRAIPTLQPISLQPLALPILQPVSPQPPAIPTLQPWSLQPLALPTLQPWSLQPLALPTLQPVSLQPLALPTRQPISLQPLALPTLQPISLQPLALPIMQPVSPQPPAIPTLQPVSLQPLALPTLQPVSPQPPAIPTLQPWSLQPLALPTLQPISLQPLALPTLQPISLQPLALPTLQPISLQPLALPTLQPISLQPLALPTLQPVSPQPPAIPILQPAPSTALSSATGAPARPSALQQAHQHGLQLCNRRPSTALSSVTGAQHGPQLCNRRTSTALSSATGAPARLSALQQAPSTALSSVTGAPARPSALQQAPQHGPQLCNRRPSTALSSATGAQHGPQLCNRRPARPLALQQAHQHGPQLCNRRPARPSALQQAHQHGPQLCNRRTSTALSSATGAPARPSALQQAPSTALSSVTGAPARPSALQQAPQHGPQLCNRGPARPSALQQAPSTALSSAPSTALSSATGAPARPSALQQAHQHGLQLYNRRPSTALSSVTGAQHGPQLCNRRTSTALSSATGAPARLSALQQAPSTALSSVTGAPARPSALQQAPQHGPQLCNRRPARPSALQQAPSTALSSVTGAQHGPQLCNRCPSTALSSVTGAQHGPQLCNRRPSTALSSATGAQHGPQLCNRRPARPLALQQAHQHGPQLCNRRPARPSALQQAHQHGPQLCNRRTSTALSSATGAPARPSAL"
misc_feature <22..1323 /gene="LOC125744763" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature <43..>576 /gene="LOC125744763" /note="DNA translocase FtsK; Provisional; Region: PRK10263" /db_xref="CDD:236669" misc_feature <889..2103 /gene="LOC125744763" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" ORIGIN
atgcagcccatctcactggagcctcgtgccatacccactctgcagcctatctcactgcagcctctggccttacccattctgcagcccgtctcaccacaacctcctgccatacctactctgcagccctggtcactgcagcctctggccttacccactctgcagccctggtcactgcagcctctggccttacccactctgcagcccgtatcactgcagcctctggccttacccactcggcaacccatctcactgcagcctctggccttacccactctgcagcctatctcactgcagcctctggccttacccattatgcagcccgtctcaccacagcctcctgccatacctactctgcagcccgtgtcactgcagcctctggccttacccactctgcagcccgtctcaccacagcctcctgccatacctactctgcagccctggtcactgcagcctctggccttacccactctgcagcccatctcactgcagcctctggccttacccactctgcagcccatctcactgcagcctctggccttacccactctgcagcccatctcactgcagcctctggccttacccactctgcagcctatctcactgcagcctctggccttacccactctgcagcccgtctcaccacagcctcctgccatacctattctgcagcccgcgcccagcacggccctcagctctgcaacaggcgcaccagcacggccctcagctctgcaacaggcgcaccagcacggccttcagctctgcaacaggcgccccagcacggccctcagctctgtaacaggtgcccagcacggccctcagctctgtaacaggcgcaccagcacggccctcagctctgcaacaggcgcaccagcacggctctcagctctgcaacaggcgcccagcacggctctcagctctgtaacaggcgcaccagcacggccctcagctctgcaacaggcgccccagcacggccctcagctctgtaacaggcgccccagcacggccctcagctctgcaacaggcgcccagcacggccctcagctctgtaacaggcgcccagcacggcccttagctctgcaacaggcgcaccagcacggccctcagctctgtaacaggcgcccagcacggccctcagctctgcaacaggcgcaccagcacggccctcagctctgcaacaggcgcaccagcacggccctcagctctgcaacaggcgccccagcacggccctcagctctgcaacaggcgcccagcacggccctcagctctgtaacaggcgcaccagcacggccctcagctctgcaacaggcgccccagcacggccctcagctctgtaacaggggcccagcacggccctcagctctgcaacaggcgcccagcacggccctcagctctgcgcccagcacggccctcagctctgcaacaggcgcaccagcacggccctcagctctgcaacaggcgcaccagcacggccttcagctctacaacaggcgccccagcacggccctcagctctgtaacaggtgcccagcacggccctcagctctgtaacaggcgcaccagcacggccctcagctctgcaacaggcgcaccagcacggctctcagctctgcaacaggcgcccagcacggctctcagctctgtaacaggcgcaccagcacggccctcagctctgcaacaggcgccccagcacggccctcagctctgtaacaggcgcccagcacggccctcagctctgcaacaggcgcccagcacggccctcagctctgtaacaggcgcccagcatggccctcagctctgtaacaggtgccccagcacggccctcagctctgtaacaggtgcccagcacggccctcagctctgtaacaggcgccccagcacggccctcagctctgcaacaggcgcccagcacggccctcagctctgtaacaggcgcccagcacggcccttagctctgcaacaggcgcaccagcacggccctcagctctgtaacaggcgcccagcacggccctcagctctgcaacaggcgcaccagcacggccctcagctctgcaacaggcgcaccagcacggccctcagctctgcaacaggcgccccagcacggccctcagctctgtaa
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@meso_cacase at
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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