LOCUS       XM_048613987            1709 bp    mRNA    linear   VRT 09-JUN-2022
DEFINITION  PREDICTED: Rhincodon typus alkaline ceramidase 1 (acer1),
            transcript variant X2, mRNA.
ACCESSION   XM_048613987
VERSION     XM_048613987.1
DBLINK      BioProject: PRJNA842712
KEYWORDS    RefSeq.
SOURCE      Rhincodon typus (whale shark)
  ORGANISM  Rhincodon typus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
            Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes;
            Rhincodontidae; Rhincodon.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_063360) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Rhincodon typus Annotation Release
                                           101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Rhincodon typus"
                     /mol_type="mRNA"
                     /isolate="14"
                     /db_xref="taxon:259920"
                     /chromosome="29"
                     /sex="male"
                     /tissue_type="blood"
                     /dev_stage="adult"
                     /collected_by="2018-05-24"
     gene            1..1709
                     /gene="acer1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 11 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:109915809"
     CDS             171..998
                     /gene="acer1"
                     /codon_start=1
                     /product="alkaline ceramidase 1"
                     /protein_id="XP_048469944.1"
                     /db_xref="GeneID:109915809"
                     /translation="

MQIFQHRLGMANVFAYQSSQIDWCEDNFQFSEKVAEFYNTISSVSFFISSPIMMYLLHPYAQKRSRAVYLIWVMIMFVGFFSAYYHMTLSYFGQLLDELSILWVLAIGYMLWFPRRHLPTFITTRKSFSRIVFLAALLSTILSFYKPTVNAYALNFVALHIIYVISLELKRCTDQRIINLAFVTVAWWLVAISCWLSDRLLCAFWRQINFYYLHSFWHVLINIAVVHGTTLFSYFDAFYEIPETCPEVKYWPVDSQWLGLPYLAIGDKDHLRKSC"

     misc_feature    213..962
                     /gene="acer1"
                     /note="Region: Ceramidase; pfam05875"
                     /db_xref="CDD:461766"
ORIGIN      

catttcttttttggttactcccctactaggtgcactgtgaagggaaacacttgtctggcagcactggacctcgtgcctgctgagcataacaatggtgccagcaccaggactaccagaggccccagcagcgatgagttttatattttatttatgtgcacaggttctacttcatgcaaatctttcagcacagactcgggatggccaacgtgtttgcatatcagagttctcagattgactggtgtgaagacaattttcagttttcagagaaagttgccgagttttacaacacgatcagcagtgtaagtttcttcatatcgtctcctataatgatgtatctattacatccatatgctcagaagaggtccagagctgtgtatctcatctgggtcatgattatgtttgtaggatttttctcagcatactaccacatgactttgagctactttggtcagttattagatgaattatccatcctgtgggtgttagcaattggttacatgctgtggtttcccagaagacacttaccaacgttcatcacaaccaggaagtctttttcacggattgtctttcttgctgcattgctgagcacaatcctctcattttataaaccaacagtgaatgcttatgcgctgaattttgttgccttgcacattatttatgtgatttcacttgaattgaaaagatgcacagatcaaagaataattaacctggcctttgtgactgtggcttggtggcttgtcgcgatttcttgctggctaagtgatcgcttactctgtgccttctggagacagataaatttttactacctccatagtttctggcatgtactgattaatattgcagttgtccatggcacaacgttgttttcatattttgatgcattttatgaaattccagagacctgcccagaagtgaaatattggcctgtagactcacaatggttaggtctaccataccttgcaataggagacaaggatcatctccgaaagtcctgctgaacgggttatatattcttaaattctaccagatattttatcaatcaatgcctacaaataatattttagtggtgctattatgggatcttttgatggtgggcacaaggaacctgatctgaaattatatatttgtcttttatttatacagttcataatattgttggccgtgcattataaggagattggttcagttttttgtaaatctggagcatttatttctattttagttattttgaattcatgttattttactctgaattcaggtgaaggccagagaatatacttttaaatatttttgtgcccaatgtcagtatgaagcactgttcagtaaaatatgacatgcataatcagcaggttaaagaatgtaatattctagtttctaaaactagctatcctactggaatatctgaagaataaacggcagattagtctcagtaatattggtaatttgtgaagtatgtaccaaaattgattttgggaacaaaacacttttattcctaacttggggaaaatatttacaataattattgttagatatctgttaattacattacaggtatgtacatcctttgtagtgtgcccttctgacaaaacagaatttgtcagtgtgatcatatatatcatctaattgcaatgcaggaataatgagccacaagtataagtattgatgcaattgtatccctgatgcacctgtacagtacgatctgcctgtaa

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