2025-04-22 06:00:17, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_048511244 838 bp mRNA linear VRT 02-JUN-2022 DEFINITION PREDICTED: Sphaerodactylus townsendi Fc epsilon receptor Ig (FCER1G), mRNA. ACCESSION XM_048511244 VERSION XM_048511244.1 DBLINK BioProject: PRJNA788548 KEYWORDS RefSeq. SOURCE Sphaerodactylus townsendi ORGANISM Sphaerodactylus townsendi Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Sphaerodactylidae; Sphaerodactylus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_059425) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Sphaerodactylus townsendi Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..838 /organism="Sphaerodactylus townsendi" /mol_type="mRNA" /isolate="TG3544" /db_xref="taxon:933632" /sex="male" /tissue_type="blood, liver" /dev_stage="adult" /collection_date="2012/2019" /collected_by="Pinto, Daza, Gamble" /linkage_group="LG01" gene 1..838 /gene="FCER1G" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns" /db_xref="GeneID:125440998" CDS 78..398 /gene="FCER1G" /codon_start=1 /product="high affinity immunoglobulin epsilon receptor subunit gamma" /protein_id="XP_048367201.1" /db_xref="GeneID:125440998" /translation="
MKLHLFTALLVLLTAEEADALKEPEICYILDGILFAYGITLTFLYCRLKIQYRKKSKQLQDSSAIYEKVEGIYTGLVTPEGDTYTPLKLTKPEPPSKTPEEEFEVE"
misc_feature 144..230 /gene="FCER1G" /note="T-cell surface glycoprotein CD3 zeta chain; Region: TCR_zetazeta; pfam11628" /db_xref="CDD:463313" ORIGIN
gcagcgcatagggctggtggttggcttcacatctgtcgggctcacctcagcagaacgaatccacccaagcctccatcatgaagctacatctcttcacagccctcttggttctcctaacagctgaggaagcagacgccctgaaggaacctgagatatgttacattttggatgggattctctttgcctacggcatcactctcaccttcctctactgtcgactgaagattcaataccgaaagaaatcaaaacagttacaggactcttcggcaatctatgagaaagtggaaggaatctatacaggccttgtcacgcctgaaggtgacacctacacacccctcaagcttaccaagcctgaaccaccgagtaaaacccctgaagaagagtttgaagtggagtaggccctgcactgctgtggcttgcggaaacctttggctgacatctgaaacctgcaaagccgcgtttgatgtgggacaactgtcgagcaatcctcgctacaccttcagggaagactctgtcctgttttgtgccctgaccaagtggctttgatgagggggagccttgttcgtggtagctgccgcttgctcttttaagccaatgcctattaggatgcggcgtgggctttttgttaactccaccgggtgctctcacgagtacctctcaaagcctattcaattgtagggcaaaactagtttgtccatgatcccgtacaaccccagggaactttatatacccttatacataattgcctaagggatggaatgtccgacgactaacccccagccaatgggtgtgcaggactcacaacattccatccaattcccgcccaccttcccccaac
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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