2024-11-15 13:27:46, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_046299832 3561 bp mRNA linear VRT 05-MAR-2022 DEFINITION PREDICTED: Oncorhynchus gorbuscha dentin sialophosphoprotein-like (LOC123996463), partial mRNA. ACCESSION XM_046299832 VERSION XM_046299832.1 DBLINK BioProject: PRJNA726253 KEYWORDS RefSeq; includes ab initio. SOURCE Oncorhynchus gorbuscha (pink salmon) ORGANISM Oncorhynchus gorbuscha Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oncorhynchus gorbuscha Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 47% of CDS bases ##RefSeq-Attributes-END## COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..3561 /organism="Oncorhynchus gorbuscha" /mol_type="mRNA" /isolate="QuinsamMale2020" /db_xref="taxon:8017" /sex="male" /tissue_type="Multiple" /dev_stage="Spawning" /ecotype="Even-year" /collection_date="2020-07-28" /collected_by="Quinsam River Hatchery" /linkage_group="LG15" gene <1..3561 /gene="LOC123996463" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:123996463" CDS <1..3561 /gene="LOC123996463" /codon_start=1 /product="dentin sialophosphoprotein-like" /protein_id="XP_046155788.1" /db_xref="GeneID:123996463" /translation="
TTLSLPLSLSLSLSLSHWCFCEMFCQHADSSDSSDSYDIYDSYDSSDISDSSDSSDISDSSDISDSSDIADSSDSYDIADSSDSYDIADSSDSSDSSDISDSYDIADSSDSSDISDSSDISDSSDIADSSDSYDIADSSDSYDISDSSDSYDISDSSDSYDISDSSDSSDISDSSDISDSSDIADSSDSYDISDSSDSSDISDSSDISDSSDIADSSDSYDIADSSDSYDIADSSDSSDSSDISDSYDIADSSDSSDISDSSDISDSSDIADSSDSYDIADSSDSYDSSDSSDSSDSSDSSDSYDIADSSDSYDIADSSDSYDIADSSDSSDSSDISDSYDIADSSDSSDISDSSDISDSSDIADSSDSYDIADSSDSYDIADSSDSSDSSDSSDSSDISDSYDIADSSDSSDISDSSDSSDIADSYDIADSSDSSDSCDISDSYDIADSSDIADSSDIADSSDSYDSYDIADSSDSYDSYDIADSSDSYDSSDSSDSYDIADSSDSYDIADSSDSYDIADSSDSSDIADSSDSYDIADSSDSYDIADSSDSYDIADSSDSSDIADSSDSSDSSDISDISDIADSSDSYDISDISDISDSSDSYDSYDIADSSDSYDISDISDSSDISDSSDSSDSSLTLAPLHPSTMLVIGRPSPRIGESRSSQRVTQLTESHAAHGESRSSRRVTQLTKSHAAHEESRSSRRVTQLTESHAAHEESRSSRRVTQLTKSHAAHEESRSSRRVTQLTKSHAAHGESRSSRRVTQLTKSHAAHGESRSSRRVTQLTKSHAAHRESRSSRRVTQLTTESHAAHDGESRSSRRRVTQLTTESHAAHGESRRVTQLTTESHAAHGESRSSRRVTQLTTESHAAHDGESRSSRRVTQLTTESHAAHGESRSSRRVTQLTESHAAHGESRSSWRVMQLTTESHAAHGESRSSRRIVTQLMESHAAHGESRSSRRRVTQLMESHAAHGESRSSRRVTQLTTESHAAHDGESRSSRRMVTQLTTESHAAHDGESRSSRTVTQLTDSHAAHDGESRSSRRRVTQLTTESHAAHDGESRSSRRRATQLTTESHAAHDGESRSSRRATQLTESHAAHRESRSSRRRATQLTESHAAHRESRSSRKVTQLTTESHAAHDGEPRSSRRVTQLTESHTAHGESRSSRRATQLTESHAEGEIVCSSSSRAE"
ORIGIN
accactctctctctccctctctctctctctctctctctttctctctctcactggtgtttctgtgagatgttctgtcaacacgctgacagctctgatagctctgatagctatgatatctatgatagctatgatagctctgatatctctgacagctctgatagctctgatatctctgatagctctgatatctctgatagctctgatatcgctgacagctctgatagttatgatatcgctgacagctctgatagttatgatatcgctgatagctctgatagctctgatagctctgatatctctgatagttatgatatcgctgatagctctgatagctctgatatctctgatagctctgatatctctgatagctctgatatcgctgacagctctgatagttatgatatcgctgacagctctgatagttatgatatctctgacagctctgatagttatgatatctctgacagctctgatagttatgatatctctgacagctctgatagctctgatatctctgatagctctgatatctctgatagctctgatatcgctgacagctctgatagttatgatatctctgacagctctgatagctctgatatctctgatagctctgatatctctgatagctctgatatcgctgacagctctgatagttatgatatcgctgacagctctgatagttatgatatcgctgatagctctgatagctctgatagctctgatatctctgatagttatgatatcgctgacagctctgatagctctgatatctctgatagctctgatatctctgatagctctgatatcgctgacagctctgatagttatgatatcgctgacagctctgatagttatgatagctctgatagctctgatagctctgatagctctgatagctctgatagttatgatatcgctgatagctctgatagttatgatatcgctgacagctctgatagttatgatatcgctgatagctctgatagctctgatagctctgatatctctgatagttatgatatcgctgatagctctgatagctctgatatctctgatagctctgatatctctgatagctctgatatcgctgacagctctgatagttatgatatcgctgacagctctgatagttatgatatcgctgatagctctgatagctctgatagctctgatagctctgatagctctgatatctctgatagttatgatatcgctgatagctctgatagctctgatatctctgatagctccgatagctctgatatcgctgatagttatgatatcgctgatagctctgatagctctgatagctgtgatatctctgatagttatgatatcgctgatagctctgatatcgctgatagctctgatatcgctgatagctctgatagttatgatagttatgatatcgctgacagctctgatagttatgatagttatgatatcgctgacagctctgatagttatgatagctctgacagctctgatagttatgatatcgctgacagctctgatagttatgatatcgctgacagctctgatagttatgatatcgctgacagctctgatagctctgatatcgctgacagctctgatagttatgatatcgctgacagctctgatagttatgatatcgctgacagctctgatagttatgatatcgctgacagctctgatagctctgatatcgctgacagctctgatagctctgatagctctgatatctctgatatctctgatatcgctgacagctctgatagctatgatatctctgatatctctgatatctctgacagctctgatagttatgatagttatgatatcgctgacagctctgatagctatgatatctctgatatctctgacagctctgatatctctgatagctctgacagctctgatagctccttaacccttgctcctttgcaccccagcactatgctggtgatcggcaggcccagcccaagaataggagagtcacgcagctcacagagagtcacgcagctcacggagagtcacgcagctcacggagagtcacgcagctcacgaagagtcacgcagctcacgaagagtcacgcagctcacgaagagtcacgcagctcacgaagagtcacgcagctcacggagagtcacgcagctcacgaagagtcacgcagctcacgaagagtcacgcagctcacaaagagtcacgcagctcacgaagagtcacgcagctcacggagagtcacgcagctcacgaagagtcacgcagctcacggagagtcacgcagctcacgaagagtcacgcagctcacgaagagtcacgcagctcacggagagtcacgcagctcacggagagtcacacagctcacgaagagtcacgcagctcacagagagtcacgcagctcacggagagtcacgcagctcacgacggagagtcacgcagctcacgacggagagtcacgcagctcacgacggagagtcacgcagctcacgacggagagtcacgcagctcacggagagtcacggagagtcacgcagctcacgacggagagtcacgcagctcacggagagtcacgcagctcacggagagtcacgcagctcacgacggagagtcacgcagctcacgacggagagtcacgcagctcacggagagtcacgcagctcacgacggagagtcacgcagctcatggagagtcacgcagctcacggagagtcacgcagctcacggagagtcacgcagctcatggagagtcacgcagctcatggagagtcatgcagctcacgacggagagtcacgcagctcacggagagtcacgcagctcacgacggatagtcacgcagctcatggagagtcacgcagctcacggagagtcacgcagctcacgacggagagtcacgcagctcatggagagtcacgcagctcacggagagtcacgcagctcacggagagtcacgcagctcacgacggagagtcacgcagctcacgacggagagtcacgcagctcacgacggatggtcacgcagctcacgacggagagtcacgcagctcacgacggagagtcacgcagctcacggacagtcacgcagctcacggacagtcacgcagctcacgacggagagtcacgcagctcacgacggagagtcacgcagctcacgacggagagtcacgcagctcacgacggagagtcacgcagctcacgacggagagccacgcagctcacgacggagagccacgcagctcacgacggagagtcacgcagctcacggagagccacgcagctcacggagagtcacgcagctcacagagagtcacgcagctcacgacggagagccacgcagctcacggagagtcacgcagctcacagagagtcacgcagctcacggaaagtcacgcagctcacgacagagagtcacgcagctcacgacggagagccacgcagctcacggagagtcacgcagctcacggagagccacacagctcacggagagtcacgcagctcacggagagccacgcagctcacggagagtcacgcagagggagagattgtctgctcttccagttccagggctgaatga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]