2025-04-22 05:54:22, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_045989883 792 bp mRNA linear MAM 04-MAR-2022 DEFINITION PREDICTED: Meles meles alkaline ceramidase 1 (ACER1), mRNA. ACCESSION XM_045989883 VERSION XM_045989883.1 DBLINK BioProject: PRJNA796981 KEYWORDS RefSeq. SOURCE Meles meles (Eurasian badger) ORGANISM Meles meles Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Melinae; Meles. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060085) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Meles meles Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..792 /organism="Meles meles" /mol_type="mRNA" /db_xref="taxon:9662" /chromosome="20" gene 1..792 /gene="ACER1" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:123932143" CDS 1..792 /gene="ACER1" /codon_start=1 /product="alkaline ceramidase 1" /protein_id="XP_045845839.1" /db_xref="GeneID:123932143" /translation="
MPSIFAYQSSEVDWCESNFQHSELVAEFYNTFSNVTFLIFGPLMMFLMHPYAQKRSRYVYITCVLFMVVGLFSMYFHMTLSFLGQLLDEIAILWLLASGYSIWMPRCYFPTFLGENRPQFICLVVTTTVVSTFLSFLRPVINAYALNSIAVHILYIVFQEYKKTSNKELRHIMEVSVVLWAFALTSWISDRLLCGFWQQINFFYLHSIWHVLISITFPYGMVTMALVDARYEMPGQTLRVRYWPRDTWPVGFPYVEVSDDKNC"
misc_feature 16..768 /gene="ACER1" /note="Region: Ceramidase; pfam05875" /db_xref="CDD:461766" ORIGIN
atgcccagcatcttcgcctaccagagttccgaggtggactggtgtgagagtaactttcagcactcggagctggtggccgagttctacaacacgttcagcaatgtcaccttcctcatctttgggcctctcatgatgtttctgatgcacccctacgcccagaaacgctcccgctatgtttatatcacctgtgtcctcttcatggtcgtaggcctgttctccatgtacttccacatgacgcttagcttcctgggccagctgctggatgagatcgctatcctgtggctgctggccagtggctacagcatatggatgccccgctgctactttcccactttcctaggagagaacaggccccagttcatctgcctggtcgtcaccaccactgtggtcagcaccttcctgtccttcctgaggcccgtgatcaacgcgtatgccctcaacagcatcgctgtgcatatcctctacatcgtgttccaggaatacaagaaaaccagcaataaggagcttcggcatatcatggaggtctccgtggttttatgggcttttgcactgaccagctggatcagtgaccgcttgctttgcggcttctggcagcagatcaatttcttttacctgcacagcatctggcatgtcctcatcagtatcacttttccttatggcatggtgaccatggccttagtggatgccaggtatgagatgccaggtcaaaccctcagagtccgctactggcctcgggacacttggcctgtggggttcccctacgtggaagtcagtgacgacaagaactgctga
//
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@meso_cacase at
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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