LOCUS       XM_019723718            5112 bp    mRNA    linear   MAM 22-DEC-2016
DEFINITION  PREDICTED: Rhinolophus sinicus testis and ovary specific PAZ domain
            containing 1 (TOPAZ1), mRNA.
ACCESSION   XM_019723718
VERSION     XM_019723718.1
DBLINK      BioProject: PRJNA358073
KEYWORDS    RefSeq; corrected model.
SOURCE      Rhinolophus sinicus (Chinese rufous horseshoe bat)
  ORGANISM  Rhinolophus sinicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera;
            Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_017738954.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Rhinolophus sinicus Annotation
                                           Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-258               NW_017738954.1     5027492-5027749     c
            259-343             NW_017738954.1     5027406-5027490     c
            344-2801            NW_017738954.1     5024513-5026970     c
            2802-2863           NW_017738954.1     5015615-5015676     c
            2864-2988           NW_017738954.1     5012715-5012839     c
            2989-3053           NW_017738954.1     5011442-5011506     c
            3054-3193           NW_017738954.1     5009167-5009306     c
            3194-3279           NW_017738954.1     5007412-5007497     c
            3280-3405           NW_017738954.1     5006539-5006664     c
            3406-3469           NW_017738954.1     5004957-5005020     c
            3470-3621           NW_017738954.1     5002565-5002716     c
            3622-3714           NW_017738954.1     5002260-5002352     c
            3715-3830           NW_017738954.1     5001043-5001158     c
            3831-3897           NW_017738954.1     4999514-4999580     c
            3898-4072           NW_017738954.1     4998405-4998579     c
            4073-4173           NW_017738954.1     4997605-4997705     c
            4174-4339           NW_017738954.1     4995400-4995565     c
            4340-4504           NW_017738954.1     4992249-4992413     c
            4505-4708           NW_017738954.1     4990789-4990992     c
            4709-4892           NW_017738954.1     4987270-4987453     c
            4893-5112           NW_017738954.1     4983923-4984142     c
FEATURES             Location/Qualifiers
     source          1..5112
                     /organism="Rhinolophus sinicus"
                     /mol_type="mRNA"
                     /isolate="Zhonghua_01"
                     /db_xref="taxon:89399"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="muscle"
     gene            1..5112
                     /gene="TOPAZ1"
                     /note="The sequence of the model RefSeq transcript was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein, and 11% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:109443414"
     CDS             1..5112
                     /gene="TOPAZ1"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: testis- and ovary-specific
                     PAZ domain-containing protein 1"
                     /protein_id="XP_019579277.1"
                     /db_xref="GeneID:109443414"
                     /translation="

MRRPPPSGPTKAPGRESDKRGLRKRGRRPEPGEAGRCGPEAGGREASRQQRMVTRASEREEVESDKSGEASGPGKAVARRRVEGWGPGGPFTPVGLAGLGSCKETQLRLQSQRHQEKRKATEASSDDLQPGIDLVRKESLTSSESFQTVECSEFRSTASLQSLGKEGSVEGIKRRIRIKKHKSLENPPLKITENKDTQNTKVEFQDELYKNTPKYSCNSLSPGVENNDKLKLHDCSCFPHFKDCNDENNLAYKPDDGCMHVPENSSKLKKENLRSLADKSDTNNIPQLLKTEESLMGVNKLLLEETDLYQSRNNGLLPCLQGGKNKYSVEESNVGRRPRKRMKVSEKEDETVIKMNFSNVYNKCELLLQGNQTGAEGKQAETLEAKKSPLELLRKVNHNTLSPVDHLLSLPKTVGKKTTPEHRVNAMFQKTLEPLLKEETKNASEPLGCKSMELEEYFKSMKSSVVKSPNDCHPVEKRSQEDLRNEAEESKFSCHRTIPMTGKRTWPCYSCARTSPYCWKKTSLPESSYFIPGSQESFSQDDFLKHQTNQTQLTDSKLSLQSSITETNSEPSCKEKLESNLNCLSSVSAVEPTLMVMKESIINNDEKIKSEEQNRSGSEVVFNMTEDTLLTNVTQNLTGSKKKDRGALTKLNLAVASQHAQEANNTTGKTSHQKACIAKQTLVAPDLVKILNTGRLSNFKIPLLKNKTEKQKEINAKSSERETYSPLELLDNLSGAEVRQKRSKGNVFTVISGPQSWSIQNSVTPGQANSDSYCSKNPYVIPPSFLKQGNNNKPSSYISGPGNIISNKEAVSHTVENNIFSCDPGYVEKSSTFSNEQETFERVSSEISGRKMTKNFSDIKVGFPDILKAYEDDVLLIDVIQDDPDLFGVSNEGELSFTSEVPMISQEPNVAEEHQSTDSKNMELPGKNPSDDLRELPVLDLGVMKSEIGTSLPAANEIKHDFKGANISLEVANETSQNEKLGDLSEHIRSSDLDEKCKFSDKVTVNEENENIDEVCKSKDSKSAENMVGECQLTVLGPKPLCLSVPPLNLNAYQEDTLLKPWTNDFRFLGKHSLPKLQNPETCENFKREKIVGVFQKPLGLMIPHRYCKFHFNTLRGCERSQCKFAHVPEQGDEKVCMDVFKKYISINNVCLLQRAVSMFMEYYRRFPPGIHFDLQVLNDLLNSLLKHCLLKEVFQVVKLSIMVKMLPALKILLEIFEHVATMKLRNAVPTLIDIFCKLIEAGMVLDPEHFNYIVKLLYQLEASKQEISAVLEMKSRLQVRQFKKNWTCDLDLALNEIEHCKEKGDWTKLGNLYINVKMGCEKFADFQRFCASIAETLTKDYKEERPGVPFCEFAETVSKDPKNSEVDKTLLGRIGISAMYFYHKLLQWSKGRKVLDKLYELKIHFTSLKGLTGPEKLAPRCQIVNIAAEIFLKNGSLDGAMWVLRESEWIISTPLWPCDRMDVLNRHNLLCTIAHEILAKSLYKQTFEVLQNLPGFQNSQETVEVSQYSLLFNKLLDACVESNSLGVSSSVAEFMISKSIPIDFSFLRRLITSLGRSCLWLKARAHYKSALSLGCYPPLEGNLYRKLLLVPSYLSEIEMLLAIEIFLVSNASSIQSPGSSTQMLQIVLKRCEENKSRNKDDYQAAVERLIMAARLSDPKLFIKHMTVNVNKEQVYSLEHCSALKWLKENMKWAGKVWLFSNH"

     misc_feature    3892..4419
                     /gene="TOPAZ1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:464250"
ORIGIN      

atgcggcggccgccgccctcgggccctacaaaggcccccgggcgtgaaagcgacaagcgaggcctgaggaagcgaggccggaggccagagccaggcgaggctggacgctgcggccctgaggccggggggcgtgaggcgagcaggcaacagagaatggtgacccgggcgtctgagagagaagaggtggaaagtgacaagtcgggtgaggcgtccgggcctgggaaggccgtggcaaggcggcgagtggagggctggggaccaggtgggcccttcacacctgtgggactagccgggcttggaagctgcaaggagacgcagctccgcttgcaatcccagagacaccaggaaaaaagaaaagctactgaagcctcaagtgatgatctacagccagggattgacctggtaagaaaggaatcattaaccagttcagaatctttccaaacagtggagtgcagtgaatttcgaagtacagcttccttgcagtctttgggtaaggaaggttcggtagaaggtattaaaagaagaattcgaattaaaaaacataaaagcttagaaaacccacctctcaaaataactgaaaataaggatacacaaaatactaaggttgaattccaagatgaactgtacaagaatactccaaaatattcttgtaacagcttgtcacctggagtagaaaataatgacaagttaaaattacatgattgcagttgtttcccccatttcaaggattgtaatgatgaaaataaccttgcatataaacctgatgatggatgtatgcatgtaccagaaaattcctcaaagttaaagaaagaaaaccttaggagtcttgcagataagagcgacacaaataatattcctcaacttttaaaaactgaagaaagcttaatgggagtaaataaattattgcttgaagaaactgatttataccaaagtagaaataatggcttgcttccctgccttcaaggtggaaaaaataaatattcagtagaggagagcaatgttgggagaagacccaggaaaagaatgaaggtatctgaaaaagaagatgaaacggttatcaagatgaacttctctaatgtgtataacaagtgtgagttgctgttacaaggaaaccaaacgggtgctgaaggtaaacaagcagagactttagaggctaaaaaaagtcctttagaacttttgagaaaagtaaaccataatacactctctccagtggatcatttgttaagtcttccaaaaacagtaggaaaaaagacaactcctgagcatcgtgtaaatgctatgtttcagaaaacccttgagccacttttgaaagaagaaacaaagaatgcttcagagcccttaggttgtaaaagcatggaactagaagagtattttaagtcaatgaaaagttcagtagtgaaatcacctaatgattgccatcctgttgaaaagagatcacaggaagacttgagaaatgaagctgaagaatcgaagttcagctgtcatagaacaataccaatgactggtaaaagaacttggccttgttattcatgtgctagaacatctccctactgttggaaaaagacttccttgccagaatcaagttactttattcctgggtctcaggaaagttttagccaagacgattttcttaaacaccaaacaaatcaaactcagttaactgactccaaattatcattacaaagttccataacagaaacaaacagtgaaccttcatgtaaagaaaaattggagtctaatttaaattgtttgtcttcagtttctgcagtagaacctacgttaatggttatgaaagaatctataatcaataacgatgaaaagataaagtcagaggaacagaacagaagtgggtcagaggtagtttttaatatgactgaagatactttgttaactaatgtgactcaaaacttaacaggaagtaaaaaaaaagatagaggggctttaacaaaacttaatttggcagtggcttcccagcatgcccaggaagcaaataacactacaggcaaaactagtcaccaaaaagcatgtattgctaagcaaacacttgtggctccagacttggttaaaatattaaacacaggacggctgagtaattttaaaattcctttacttaagaataaaacagaaaaacaaaaagaaataaatgccaagtcatcagagagagaaacatacagtcccttggagcttcttgacaatttatctggagcagaggtaagacagaagaggagcaaaggaaatgtcttcacagtaatttcaggacctcagtcttggagcatacaaaatagtgtaactccagggcaagctaattctgattcatactgcagtaagaatccctatgttattcctccaagctttttaaagcaaggtaataataataaaccatccagctacatctctggaccaggcaatattatttctaataaggaagctgtttctcacacagttgagaacaatattttttcttgtgatcctgggtatgtagagaaaagttctaccttctctaatgaacaagaaacatttgaacgagtttcctctgaaattagtggtagaaaaatgactaagaacttttcagatattaaagtggggtttccagatattcttaaagcatatgaagatgatgtcctcttaattgatgtaattcaagatgaccctgacctctttggagtctccaatgaaggggagctctcatttacttcagaggtccccatgataagccaggagcccaatgttgctgaagagcaccaatcaacagactccaagaacatggaacttcctggaaaaaatccaagtgatgacttgagagaacttcccgtactggatcttggagtgatgaagtcagagatcgggacttccttgccagcagcaaatgagataaaacatgattttaaaggtgctaacatttccttagaagttgctaatgagacctctcaaaatgaaaaactgggagacctcagtgaacacataagaagttcagacttggatgaaaagtgtaaattttcagacaaagtgactgttaatgaagaaaatgaaaatattgatgaagtttgcaaaagcaaagattctaaaagtgcagaaaatatggttggtgaatgtcaattaacagtgctgggccccaaacctctgtgcttatcagtgccacctttgaatctaaatgcttatcaagaagacacattactgaagccctggacaaatgatttcagatttctaggaaaacattctctcccaaagttgcagaatcctgaaacttgtgaaaattttaagagggaaaaaattgtaggggtgttccagaagcccctagggttgatgataccccatagatattgcaaatttcattttaatacgttacgtggctgtgagcgatcacaatgcaagtttgctcatgtgcctgagcaaggggatgaaaaggtttgtatggatgtgtttaagaaatacataagtatcaacaatgtatgtttactacaacgtgcagtaagcatgtttatggagtactacagaagatttcctccaggtatacactttgatttacaagtgctaaatgaccttctaaattctttactcaaacattgtttattgaaagaagtatttcaggtagtgaaactcagcataatggttaaaatgctgcctgctctgaaaatactactagaaatatttgagcatgtggcaactatgaaattaaggaatgctgtacctaccttaattgatatcttttgcaagcttattgaagctgggatggtgcttgacccagaacactttaactatattgtgaagctcttataccaactagaggcttccaaacaagaaataagtgcagttctggaaatgaaatccaggttacaagtgaggcaatttaaaaagaactggacctgtgatttagatttagccttgaatgaaatagagcattgtaaagaaaaaggtgactggaccaaactgggaaatttatatattaacgtgaaaatgggctgtgaaaaatttgcagatttccagagattttgtgcttctattgctgaaacactaacaaaagactataaagaagagagaccaggtgttccattttgtgaatttgctgaaacagttagcaaagatccaaaaaacagtgaagtagataaaactttgctgggaagaatcggaatcagtgctatgtacttctatcacaaattgttgcagtggtccaagggaaggaaggtcttagataaactatatgaattaaaaatacattttacaagtttaaaaggacttacagggcctgagaagttagcaccaagatgtcaaattgtgaatattgcagcagaaatttttctgaaaaacggaagcctagatggtgccatgtgggtattaagggagtcagaatggataatcagtaccccactgtggccttgcgatagaatggacgtactcaatcgacataatctgctctgtacaattgcacatgaaatcttagccaagagcctttacaaacagacatttgaagtcttgcaaaatctaccaggttttcaaaattctcaagaaactgtggaggtctcccagtacagccttctttttaataaacttctagatgcctgtgtagaaagcaacagccttggtgtatcgtcctctgtagcggaattcatgatttcaaagagcatcccgattgatttttcctttcttagaagattaattacttctttaggaaggagttgtttatggctcaaagccagagcccactacaaaagtgctctttcattgggttgctacccgccattagagggaaatttataccgaaaacttctactggttccttcttatttatctgagattgaaatgcttttagctattgaaatcttcctggtatctaatgctagtagtattcaaagtcctggttcttctacacagatgctgcagatagttttgaaaagatgtgaagaaaacaaatctcggaacaaggatgattatcaagctgcagtggaaagattaattatggcggctcgtttatcggatccaaagcttttcattaagcacatgacggtcaatgttaacaaggagcaggtttatagtttggaacattgttctgccctgaaatggttgaaagagaacatgaagtgggccggaaaggtttggcttttcagtaaccattag

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