LOCUS       XM_015947922            1506 bp    mRNA    linear   VRT 20-DEC-2024
DEFINITION  PREDICTED: Nothobranchius furzeri vimentin-related 2 (vimr2), mRNA.
ACCESSION   XM_015947922
VERSION     XM_015947922.3
DBLINK      BioProject: PRJNA1195976
KEYWORDS    RefSeq.
SOURCE      Nothobranchius furzeri (turquoise killifish)
  ORGANISM  Nothobranchius furzeri
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes;
            Nothobranchiidae; Nothobranchius.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091741) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 20, 2024 this sequence version replaced XM_015947922.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_043380555.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/11/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Nothobranchius furzeri"
                     /mol_type="mRNA"
                     /strain="GRZ-AD"
                     /db_xref="taxon:105023"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="skeletal muscle"
                     /dev_stage="adult"
                     /geo_loc_name="Japan: Osaka"
                     /collection_date="2024-02-02"
     gene            1..1506
                     /gene="vimr2"
                     /note="vimentin-related 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 39
                     long SRA reads, 4 Proteins"
                     /db_xref="GeneID:107377946"
     CDS             134..1294
                     /gene="vimr2"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_015803408.3"
                     /db_xref="GeneID:107377946"
                     /translation="

MAMLRVSSYRKLFEDESWSRDVGLSSRCAGRYRASARDAAVHKRDCINVDFEASKALNKEGLSRFVQERSSLASLNDRLVQLIELAHCFEEENKALESEIAELDEVMNNKQTSGKVSAVPDYSLDAVVEKLRRQKDEILGETEELTEELERVCQEYEKVAHQRILIQQEQRGVSEEVNAVTAECLALREQVSIYEEQLTNMEAKHRMEVESLLNPDERTLRAAVITFGSPDITPALDVKEFYQQLAESLQFEGSTSSSAVARRGDGNRLEGGGAEGSRVKNLPEIKDVSEMNALISELIEELTDLEKRNEELEEEAEIKTTAYMDEVAELECSMEELRQQEADLKSQMKEQCEEYKELLKEKMARHMEIAAYRSLVEEEEDRLCCL"

ORIGIN      

tggctgatgatggttctatagttggtctgcttcacctctctgctacattctcattccccgtgattataaaacctgccacacagctgctgtcgtcatttttctgttgtgttttatcctgaatctatcagacattatggcaatgctcagggtgtcttcttaccgcaagctgtttgaggatgaaagctggagtagagacgtgggtttgagttcacggtgtgcaggacggtaccgggcctctgccagagatgcagctgttcacaagcgcgactgtataaatgtagactttgaagcttccaaagctctgaacaaagagggtctgagtcggtttgtccaggaacgctcatccctcgcttccctcaacgaccgtctggttcaactaattgaactggctcattgttttgaggaggagaacaaggctctggaaagtgagatcgctgaactggacgaggtgatgaataataaacagacttccggcaaggtgtcagctgtccctgattacagtttggatgcagtggtggaaaaactacgcaggcagaaggatgagattcttggtgaaacagaagaactaacagaagagcttgagcgtgtttgccaagagtatgagaaggttgcacatcagaggatcctcattcagcaggaacagcgaggtgtttccgaggaagtaaatgctgtgactgcagagtgtttggcactgagggaacaagtgtccatctacgaggaacagctgaccaacatggaggccaagcacaggatggaagtggaaagtctacttaatccagatgaaaggactctgagagcagcagtgattacatttggcagtcctgacatcactccggccttggatgtaaaggagttctaccagcagctggctgagagcctccagtttgagggcagcacttcctcttctgctgtagctcgccgaggggatggaaacaggctggaagggggaggagctgaggggtcgagggtcaaaaacctgccagagataaaggatgtcagtgagatgaatgcactgatttcagaacttatagaagagctcacagatctggagaagcgtaatgaggagctggaggaagaagctgagatcaaaacgactgcatacatggatgaagttgctgaattagagtgttctatggaagaattaaggcagcaggaggctgatctcaaatcacagatgaaggagcaatgtgaagagtacaaggagctgctgaaagagaagatggcgagacacatggagatcgctgcctacaggagtctggtggaggaagaagaggacaggctgtgctgcctgtgattaaagactttgattgactggatggagtttggctggatgcttccctgacacccggattagaacataggcaataaagaaacacgaaaaacagatcccaaagcagcactttgatgaagtttaaggtaccaatgcagcagtttgagtaaatgtttgcttatcatgatagattaatgctgtctagaggcctaagccggaccattgataacaggtca

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