GGRNA ver.2 Home | Help | Advanced search    Previous release (v1)

2024-11-15 18:40:06, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       NR_027802                716 bp    RNA     linear   ROD 04-AUG-2023
DEFINITION  Mus musculus metastasis associated gene 2 (Mtag2), transcript
            variant 1, long non-coding RNA.
ACCESSION   NR_027802 XR_035718 XR_035719
VERSION     NR_027802.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 716)
  AUTHORS   Ishiguro T, Nagawa H, Naito M and Tsuruo T.
  TITLE     Analysis of novel metastasis-associated gene TI-227
  JOURNAL   Jpn J Cancer Res 91 (4), 390-394 (2000)
   PUBMED   10804286
REFERENCE   2  (bases 1 to 716)
  AUTHORS   Kelly CD, Carter ND, Jeffery S and Edwards YH.
  TITLE     Characterisation of cDNA clones for rat muscle carbonic anhydrase
            III
  JOURNAL   Biosci Rep 8 (5), 401-406 (1988)
   PUBMED   2852973
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC119507.1 and AK042966.1.
            
            On or before Jun 18, 2009 this sequence version replaced
            XR_035718.1, XR_035719.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript.
            
            ##Evidence-Data-START##
            Transcript is intronless :: U88401.1 [ECO:0000345]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-533               BC119507.1         1-533
            534-716             AK042966.1         505-687
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Mus musculus"
                     /mol_type="transcribed RNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 29.28 cM"
     gene            1..716
                     /gene="Mtag2"
                     /gene_synonym="MAG"
                     /note="metastasis associated gene 2"
                     /db_xref="GeneID:50994"
                     /db_xref="MGI:MGI:1860766"
     ncRNA           1..716
                     /ncRNA_class="lncRNA"
                     /gene="Mtag2"
                     /gene_synonym="MAG"
                     /product="metastasis associated gene 2, transcript variant
                     1"
                     /db_xref="GeneID:50994"
                     /db_xref="MGI:MGI:1860766"
     exon            1..716
                     /gene="Mtag2"
                     /gene_synonym="MAG"
                     /inference="alignment:Splign:2.1.0"
     regulatory      695..700
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Mtag2"
                     /gene_synonym="MAG"
ORIGIN      
gatgtcacctgaatctagtagcgcgcagcatggaacgcgagtcgcgaccccgggtccccacggcggcgcgcgtctcacgggacacgagggttgggcggcgggataggaattcaacattcaaggtgggattttttttttttaagacaagggcggctcccggaaggatgtgctcggttggaaggtgaggcaagtggacgacgggtggcgagtgcgtgttactctgcacccctgcgcccgtctagggtactgcatgcgccccaccaacccgactcctacgcagacggtggcacggcccgcaagggttcccccagtggatggttcgctccgccccgcctacagaggcaatgatcaggcggcttctgctggtttcaagactcccgcgtccgactcactggagaccttgccaggccttggccttccgaacctcttaagggttgggggcagtggtctttagtggtgctccctggcgctcacatagacgcagccttgggtcgggctagtctctgggacaccggccagcctccgccttcagagctgcgcgagcgttgtctatcatggtacacagactggaatgagcttgttcttaacctcagcttcactgtcctcctcccccacagagactattccaggatgcgcgacagacacacaagacactcggtgagggttaaagatctttaaataaggagccagtgacaataaataatactgtacagggg
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]