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2024-11-15 21:58:26, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       NM_075351                619 bp    mRNA    linear   INV 21-AUG-2024
DEFINITION  Caenorhabditis elegans PAZ domain-containing protein (F55C9.3),
            partial mRNA.
ACCESSION   NM_075351
VERSION     NM_075351.2
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 619)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 619)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 619)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUL-2024) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 619)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003283).
            
            On Sep 4, 2019 this sequence version replaced NM_075351.1.
            COMPLETENESS: incomplete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="V"
     gene            1..>619
                     /gene="F55C9.3"
                     /locus_tag="CELE_F55C9.3"
                     /db_xref="GeneID:186291"
                     /db_xref="WormBase:WBGene00010100"
     CDS             116..619
                     /gene="F55C9.3"
                     /locus_tag="CELE_F55C9.3"
                     /standard_name="F55C9.3"
                     /note="Partially confirmed by transcript evidence"
                     /codon_start=1
                     /product="PAZ domain-containing protein"
                     /protein_id="NP_507752.1"
                     /db_xref="GeneID:186291"
                     /db_xref="WormBase:WBGene00010100"
                     /translation="
MKAKIVIMEKIIKGKEHLEYLSNIKKLAETITVPTGIDVKISIKKHMPKKNFGNVEVVYQHGRRKTGIIQLSNNDAYLMFGPRRQMITVEEHFRRRYNVELRHPKLRLFHFTNETQAKSPVETPFFLNHKKSSFLTFFNCFFNTFKQIKFIFSFLNLKKNTVHSLLS"
     misc_feature    164..460
                     /gene="F55C9.3"
                     /locus_tag="CELE_F55C9.3"
                     /note="PAZ domain, named PAZ after the proteins Piwi
                     Argonaut and Zwille. PAZ is found in two families of
                     proteins that are essential components of RNA-mediated
                     gene-silencing pathways, including RNA interference, the
                     piwi and Dicer families. PAZ functions as a...; Region:
                     PAZ; cl00301"
                     /db_xref="CDD:469713"
ORIGIN      
attcagtaggacctagactattctgctttttcgggtgtttgtgtgatgcccttctacttctattttttctgaattatttagttttaattcttctgctgggaatggaaaatcagaaatgaaagcgaaaattgtgatcatggaaaagattattaaagggaaagaacatttagaatatctgtcaaacatcaaaaaacttgcagagacgataactgttccaactggaatagacgtgaaaatttcaatcaagaaacacatgcctaaaaaaaattttggaaatgtcgaagttgtttatcaacacggaagaaggaaaaccggaatcattcaattatccaacaacgatgcgtatttgatgtttggaccaagacgacaaatgataacagtagaagaacatttccgcagacgctacaacgtggagctaagacacccgaaactaagactattccatttcaccaacgagacgcaggcaaaatcaccggtggaaacacctttttttttaaatcacaaaaaaagttctttcttaaccttttttaactgtttttttaatacttttaaacaaataaaatttattttttcttttttaaacttaaaaaaaaataccgtacacagtctcctcagctga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]