LOCUS       NM_001309768            1355 bp    mRNA    linear   INV 01-JUL-2024
DEFINITION  Hydra vulgaris homeobox protein OTX2-like (LOC100211908), mRNA.
ACCESSION   NM_001309768
VERSION     NM_001309768.1
KEYWORDS    RefSeq.
SOURCE      Hydra vulgaris (swiftwater hydra)
  ORGANISM  Hydra vulgaris
            Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina;
            Anthoathecata; Aplanulata; Hydridae; Hydra.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF114441.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF114441.1, DN248875.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00242133, SAMD00242134
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Hydra vulgaris"
                     /mol_type="mRNA"
                     /db_xref="taxon:6087"
                     /chromosome="06"
                     /map="06"
     gene            1..1355
                     /gene="LOC100211908"
                     /gene_synonym="CnOtx"
                     /note="homeobox protein OTX2-like"
                     /db_xref="GeneID:100211908"
     CDS             22..744
                     /gene="LOC100211908"
                     /gene_synonym="CnOtx"
                     /function="cell movement; anterior specification"
                     /note="homeobox protein Otx"
                     /codon_start=1
                     /product="homeobox protein OTX2-like"
                     /protein_id="NP_001296697.1"
                     /db_xref="GeneID:100211908"
                     /translation="

MTMSDSPLDSPLNMNSGAIKSETPPKRRRERTTFTKAQLDVLEDMFGKTMYPDVFMREEVAKKINLAEARVQVWFKNRRAKFRRSRENPGRHFDNNKYLGREKLMPEDLIRTFPKSSRGTPHSYPNTSNYPPLWKYPVADHSPPYAGNNIIEEPVYRQSNPYAPISPYEYNFPSGRPPYFTQPPYYSPSAPSQDYLSNSVSAPSSTNSISSLSFSQHDTRNELNLPASYWSGAGYMGANM"

     misc_feature    103..273
                     /gene="LOC100211908"
                     /gene_synonym="CnOtx"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
ORIGIN      

cacgagtttatcttgtgcgcgatgaccatgtccgatagccccttggatagtccattaaacatgaattctggagcaataaagtcagagactccacctaaaagacggcgtgaaaggaccacttttacaaaagcacaacttgacgtgctggaagatatgtttggaaaaactatgtatccggatgtatttatgagagaagaagtagctaaaaaaattaatttggctgaagcccgagtacaggtttggttcaaaaatcgacgtgcaaagtttcgacgctctcgtgaaaaccctggtcgacattttgataataataagtatttagggcgtgagaaattaatgcccgaagatctcattcgaacctttcctaaaagtagtagaggcactccacactcttacccaaatacaagcaattatcctccgctatggaaatatccagttgcagaccacagtccaccatatgcaggaaataatataattgaagaaccggtttatagacaatcaaacccatacgctcccatctcaccttatgaatataattttcctagtgggagaccaccatactttactcagccaccttattatagtccgtctgcacctagtcaagattatctttcaaattccgtttcggcgccatcaagcacaaatagtatatcaagtttatctttttcgcaacatgacactagaaatgaattaaatcttcctgcgtcttattggagtggagcagggtatatgggtgcgaatatgtagtttaattataaagcacctcaaaaatggaaatctatttcagatagacacaacaaaattgatttaaaaatcaaacagttgtacatagaaaagctttttttacaattcattaaaaaaagatatcctttagatttaagtctaagaccaataaaccaatcgattgcgtaaattacaaaactaattggttgtgtctagaaaacaattgtacagattggtagtttcaaaaaatactactggactaaaacattagaacaactcacaagttgttttatttgcatttttaaaatatatataccatgttttaaatttttatcgtagaactattatgcagttatttttgttcaactttttatttatgtataaatcgatatgacactgctatattaccagtgaaaatgtcggtttagcaaaatttcaagcctttatgaaaaggaaaatggctgaaacaatgatttttttcacaattttgttttaacaaatttattttgttaataaaaaaaatgtagcagcgatcaaaaatggaaaaatatatgttattgaaacaactttttaattttctatttatcaattaactgatttaacgtataaacctgttttagattttttctcgtgcc

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