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2024-11-15 18:01:12, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       NM_001142750            1040 bp    mRNA    linear   ROD 19-AUG-2024
DEFINITION  Mus musculus TGFB-induced factor homeobox 2-like, X-linked 2
            (Tgif2lx2), mRNA.
ACCESSION   NM_001142750 XM_001472895
VERSION     NM_001142750.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Lai,Y.L., Li,H., Chiang,H.S. and Hsieh-Li,H.M.
  TITLE     Expression of a novel TGIF subclass homeobox gene, Tex1, in the
            spermatids of mouse testis during spermatogenesis
  JOURNAL   Mech Dev 113 (2), 185-187 (2002)
   PUBMED   11960710
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC123953.4.
            
            On Aug 19, 2024 this sequence version replaced NM_001142750.1.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR5189685.95538.1, SRR5189673.76916.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1040              AC123953.4         89561-90600
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 49.58 cM"
     gene            1..1040
                     /gene="Tgif2lx2"
                     /note="TGFB-induced factor homeobox 2-like, X-linked 2"
                     /db_xref="GeneID:100039551"
                     /db_xref="MGI:MGI:3800824"
     exon            1..1040
                     /gene="Tgif2lx2"
                     /inference="alignment:Splign:2.1.0"
     CDS             127..822
                     /gene="Tgif2lx2"
                     /codon_start=1
                     /product="TGFB-induced factor homeobox 2-like, X-linked 2"
                     /protein_id="NP_001136222.1"
                     /db_xref="CCDS:CCDS53177.1"
                     /db_xref="GeneID:100039551"
                     /db_xref="MGI:MGI:3800824"
                     /translation="
MEEAEGSPEETQDFMKYYSSFGIRLERTCKMKFHDSRELPRGNMLPLKSVKILRDWLCEHQFNAYPTVADKRMLSKNTDLSYLQVSNWFVNIRKHLRWEIRYKPYSLSHEGQAANAAQKQHSNPSEEVKTQFNENADMQDLPLPIRQDSEEKVPYLESSPNQKVIAEDNIEKEEKISITEPWSSPEVAWPEEKPDFSSFYMLVDVAVQKAKEMEEQKKQNPNPQGPQQQFM"
     misc_feature    301..408
                     /gene="Tgif2lx2"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      
agtctggcaacagatgagaatccaattcagacagcagtgaaagtcttccctgactctctctgggcagctttagtcctacttcgttcatccctggtttctaagccactgaaagcagtcttccagaacatggaggaggctgaaggtagtccggaagaaacccaggactttatgaaatactacagctctttcgggataagacttgagagaacctgtaagatgaagtttcatgacagtcgggagcttccgagaggaaacatgttgccattgaagtctgtgaagatcctccgtgactggctctgtgagcaccagtttaacgcctaccctactgtagcagacaaacgaatgctgtccaagaataccgatttatcttacctgcaggtatccaactggtttgtaaatatccgcaaacaccttcgctgggaaattcgttacaaaccatacagcttgagtcacgaaggccaggctgccaatgcagcccagaagcagcactccaatccatccgaggaggtcaagacacagtttaacgaaaacgccgatatgcaggatctgcccctgccaatacgtcaagattccgaagagaaagtgccatatctggagtcttctccaaaccagaaggttatcgctgaagacaacatagagaaagaagagaagatttcaatcactgagccttggtcttctcctgaagttgcatggccagaggaaaagcctgattttagcagcttctacatgttggttgatgttgctgtacagaaggcaaaagaaatggaggagcagaagaagcaaaaccccaacccacagggtccccaacaacagttcatgtagccagttctttgaactctgggaggttcatttatactcaacctgattagcttgtaatgccgtcttctgctccatattattctcctttagaagtcttttccatcaatgttttctgaagaaagttactatccatgatattcaactttaacaaattgctaactttattctcctcccctggactttagccctatatatttattattaaacatcatgcaagctac
//

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]