2025-04-17 04:46:20, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_012958526 670 bp mRNA linear VRT 18-DEC-2019 DEFINITION PREDICTED: Xenopus tropicalis myosin light chain 7 (myl7), transcript variant X1, mRNA. ACCESSION XM_012958526 VERSION XM_012958526.2 DBLINK BioProject: PRJNA205740 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012958526.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..670 /organism="Xenopus tropicalis" /mol_type="mRNA" /strain="Nigerian" /db_xref="taxon:8364" /chromosome="3" /sex="female" /tissue_type="liver and blood" /dev_stage="adult" /note="F17 inbred" gene 1..670 /gene="myl7" /gene_synonym="mlc2; myl2a; mylc2a" /note="myosin light chain 7; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 197 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns" /db_xref="GeneID:100135145" /db_xref="Xenbase:XB-GENE-964041" CDS 102..623 /gene="myl7" /gene_synonym="mlc2; myl2a; mylc2a" /codon_start=1 /product="myosin regulatory light chain 2, atrial isoform isoform X1" /protein_id="XP_012813980.1" /db_xref="GeneID:100135145" /db_xref="Xenbase:XB-GENE-964041" /translation="
MASRKAAGKAAAKRAQRGSSNVFSMFEQSQIQEFKEAFSCIDQNRDGIITKSDLKETYMQLGKMNVNEDELDEMLKEGKGPINFTVFLSLFGEKLNGTDPEDSILAAFKILDPNATGNINKDELKQLLMTQADKFTAEEVDQMFAVTPIDVAGNIDYKSLCYIITHGDEKEDS"
misc_feature 174..596 /gene="myl7" /gene_synonym="mlc2; myl2a; mylc2a" /note="calmodulin; Provisional; Region: PTZ00184" /db_xref="CDD:185504" ORIGIN
gcctggagctattttagctatggttgagataagaagtagtataaaatggcaaggagaactttccattaggtggcacaggacaaaggaagaaagcaaagaacatggccagcagaaaagctgcagggaaggcagctgctaaacgtgctcagcgaggctcctccaatgtcttctccatgtttgagcagtcacagatccaagaatttaaggaggcatttagctgtattgaccaaaaccgtgatgggatcatcaccaaatctgacctcaaagaaacatatatgcaattggggaagatgaatgtgaacgaggatgagctggacgagatgctcaaagagggcaagggacccattaacttcacagtgttcctgtcactgtttggcgagaagcttaacggaacggacccagaagactcaatccttgctgcatttaaaattctcgaccccaatgcaactggcaatatcaacaaagatgaattaaagcaacttctgatgacacaagcagacaaattcactgcagaggaggtagaccagatgttcgccgtgactccgattgacgtagcaggaaatattgactacaagtcactgtgttatatcatcacgcatggagatgaaaaagaagactcataaacattcagctggaaataaaatcacaagttctgcagtctgttatttca
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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