LOCUS       NM_203568               1034 bp    mRNA    linear   VRT 23-JUN-2025
DEFINITION  Xenopus tropicalis transmembrane protein 47 (tmem47), mRNA.
ACCESSION   NM_203568
VERSION     NM_203568.1
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
REFERENCE   1  (bases 1 to 1034)
  AUTHORS   Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W.
            and Richardson,P.
  TITLE     Genetic and genomic tools for Xenopus research: The NIH Xenopus
            initiative
  JOURNAL   Dev Dyn 225 (4), 384-391 (2002)
   PUBMED   12454917
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC059749.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC059749.1, EL847721.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00028292, SAMD00028295
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Xenopus tropicalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8364"
                     /chromosome="2"
                     /map="2"
     gene            1..1034
                     /gene="tmem47"
                     /note="transmembrane protein 47"
                     /db_xref="GeneID:394494"
                     /db_xref="Xenbase:XB-GENE-951338"
     exon            1..253
                     /gene="tmem47"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    16..18
                     /gene="tmem47"
                     /note="upstream in-frame stop codon"
     CDS             34..573
                     /gene="tmem47"
                     /note="transmembrane 4 superfamily member 10"
                     /codon_start=1
                     /product="transmembrane protein 47"
                     /protein_id="NP_988899.1"
                     /db_xref="GeneID:394494"
                     /db_xref="Xenbase:XB-GENE-951338"
                     /translation="

MASSASGMEEVRSSVLTPLKLVGLVCIFLALCLDIGAVLSPAWVTADNQYYLSLWESCKKAENLWICDSTLESDWQIATLALLLGGAAIILIAFLVGLISICVGSRRRFYRPVAVMLFAAVVLQVCGLVLYPIKFIETVTLKIYHEFNWGYGLAWGATIFSFGGAILYCLNPKNYEDYY"

     misc_feature    94..537
                     /gene="tmem47"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:473919"
     misc_feature    94..156
                     /gene="tmem47"
                     /note="propagated from UniProtKB/Swiss-Prot (Q6PBE5.1);
                     transmembrane region"
     misc_feature    274..336
                     /gene="tmem47"
                     /note="propagated from UniProtKB/Swiss-Prot (Q6PBE5.1);
                     transmembrane region"
     misc_feature    370..432
                     /gene="tmem47"
                     /note="propagated from UniProtKB/Swiss-Prot (Q6PBE5.1);
                     transmembrane region"
     misc_feature    481..543
                     /gene="tmem47"
                     /note="propagated from UniProtKB/Swiss-Prot (Q6PBE5.1);
                     transmembrane region"
     exon            254..394
                     /gene="tmem47"
                     /inference="alignment:Splign:2.1.0"
     exon            395..1011
                     /gene="tmem47"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

gtcttgtgttgctgctgatcaggggtggggaccatggcttcttcagccagcgggatggaggaggttcgttcttctgttttgacccctctaaagctggtgggactggtctgcatcttcctggcactatgtctggatatcggagccgttctgagcccagcctgggtgacggcggacaaccaatactatctgtcattatgggagtcttgcaagaaagctgaaaacctctggatatgcgattctaccctggagagcgactggcagattgctactcttgccttacttttaggcggcgctgctatcatactaatcgccttccttgtgggcctgatctccatctgcgtgggatcccgtaggcggttctacagaccggtggcagtgatgcttttcgcagcagttgttctccaggtctgcggtctcgtattgtacccaatcaaattcatcgaaacagtcactttaaagatataccatgaattcaactggggatatggactggcctggggtgcaactattttttcttttggaggtgccatactttactgcctgaatcctaagaattatgaggattactactaaacctgggctgtaaatgaagaaatgaaaaacaggactattcaacttttttttctatctccgttttctagaacacatatggagcataaagcaatctgcacagttgatttaatcacttttgcctttcggctgccaataatataaccagctttacatccactttcaaaaactgccgaacataaagcaaagagtgggaaaaggaatccgcggataactgcataggtgactgctgaaatctgttgctatcttaacagactacacaaacataatcatggtataaatagttaattgcaaataaaatgacaataaccaccaaatgcatctgccgccaagatctgtataaaatcttaccactgcattgtgctgctgagttttgctcaatagtgtgctgcagagattggattctggtgaatagaaagcttaataatgcttgttcttcaaccaaaaaaaaaaaaaaaaaaaaa

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