LOCUS       NM_001276377            3616 bp    mRNA    linear   VRT 30-OCT-2016
DEFINITION  Xenopus tropicalis POU class 3 homeobox 2 (pou3f2), mRNA.
ACCESSION   NM_001276377 XM_002934872
VERSION     NM_001276377.1
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
REFERENCE   1  (bases 1 to 3616)
  AUTHORS   Fierro AC, Thuret R, Coen L, Perron M, Demeneix BA, Wegnez M,
            Gyapay G, Weissenbach J, Wincker P, Mazabraud A and Pollet N.
  TITLE     Exploring nervous system transcriptomes during embryogenesis and
            metamorphosis in Xenopus tropicalis using EST analysis
  JOURNAL   BMC Genomics 8, 118 (2007)
   PUBMED   17506875
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AB557604.1,
            CN113142.1, CN113141.1, CR438202.1, EL858795.1, BQ527559.1,
            CR570110.1 and BX743483.1.
            
            On Feb 3, 2013 this sequence version replaced XM_002934872.1.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1149              AB557604.1         1-1149
            1150-1239           CN113142.1         605-694
            1240-1286           CN113141.1         165-211             c
            1287-1336           CR438202.1         614-663             c
            1337-1369           CN113141.1         82-114              c
            1370-1667           CR438202.1         283-580             c
            1668-2421           EL858795.1         1-754
            2422-2981           BQ527559.1         80-639
            2982-3524           CR570110.1         125-667             c
            3525-3616           BX743483.1         6-97                c
FEATURES             Location/Qualifiers
     source          1..3616
                     /organism="Xenopus tropicalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8364"
                     /chromosome="5"
                     /map="5"
     gene            1..3616
                     /gene="pou3f2"
                     /note="POU class 3 homeobox 2"
                     /db_xref="GeneID:100486226"
     CDS             1..1149
                     /gene="pou3f2"
                     /codon_start=1
                     /product="POU domain, class 3, transcription factor 2"
                     /protein_id="NP_001263306.1"
                     /db_xref="GeneID:100486226"
                     /translation="

MATTASNHYNLLGSGSSIVHSEPGGMQQAQSYRDAQTLVQSDYTLQSNGHPLSHAHQWITALSHGDGAPWASSPLGQQDIKPSVQSSRDELHGAGTLQHQGRAPHLVHPAHGNHHGPGAWRSTGSAHLSSMASSNGQGLLYSQPSFTVNGMINPGSGQGMHHHGLRDAHDDHHGEHGHQPPPQTQQQHSQLQGGHHDHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGGTIPGPEDVYGASRDTPPHHGVQTSVQ"

     misc_feature    601..825
                     /gene="pou3f2"
                     /note="Found in Pit-Oct-Unc transcription factors; Region:
                     POU; smart00352"
                     /db_xref="CDD:197673"
     misc_feature    880..1050
                     /gene="pou3f2"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
ORIGIN      

atggcgactacagcgtccaaccactacaacctgctgggctccggctcctccatcgtgcactcggagcccggcggcatgcagcaggcgcagagctacagagatgcacaaacgctggtgcagagcgactacacgctgcagagtaacgggcatcccctaagtcacgctcaccagtggatcacagcgctatcccacggcgacggggctccctgggccagcagtcccctgggccaacaggacatcaagccctcagtgcagtccagcagggatgagttgcacggcgccggcaccttgcagcatcagggcagagccccccacctagtgcaccctgctcatggcaaccaccatgggccaggggcatggaggagcaccggctctgcccacctgtccagcatggcttcctccaatggccagggactactctactctcagcccagcttcactgtcaatggtatgatcaacccgggctctgggcaaggcatgcaccaccatgggctcagggatgcccacgacgaccaccatggcgagcacgggcaccagccacccccccagacgcagcaacaacactcccagctccagggggggcaccacgatcactcggacgaggacaccccgacttcggatgacctggagcagtttgccaagcagttcaagcagaggaggatcaagctgggatttacacaggcggacgttgggctggccctgggcaccctctatggcaatgtcttctctcagaccacgatctgtaggttcgaggccctgcagctaagctttaagaacatgtgcaagctcaagcctttgttgaacaagtggctggaagaggcggactcatcctccgggagccccaccagtatagacaagatagcagcccagggaaggaaaaggaaaaagagaacctccatagaggtcagcgtcaagggggctctggaaagccatttcctaaagtgcccaaaaccatctgcccaggagatcacctcccttgcggacagcttacagttagagaaagaggtggtcagggtctggttttgtaacaggagacagaaagagaaaagaatgacccccccgggaggaactattccagggccagaggatgtatatggggctagcagagacacaccgccacatcatggggttcagacttctgtacagtgaaccccgccactatcccacttccaaagtgggattgtccttttatactcccaacaagcacttggactatctcacaagatagcaggtgcaatgaaggggtctggctctgacctttgcagtggagtccatggagtagagtgagtatatccaacagtggttccaacctgtggttcattcagcaggagttgaactacaactctcagcatccccgaggagataaaagctgccggaggatgttggaagctgtatttcaaccacagttggaggcagtcgcaggctgggcatctctggttatacagctgaaacacgtgagcccttgagacttgcaacaacccacccaactaagaataatacggcaaaaaaaaagattaaccctggtaaactggagaggtagctttatacactggagtgattctcactattgattttgtttttagctgctgtgtttatttaaagtggaaccttttacaaacccaattttgacagtatttatacagaattttttgcactgcaaggaaagtgaagtttacatgaacccacccatgaagattcatttgtcccaatcgagaagaaaaacaaaaaaaaaagtttgttttgttctgtgtcttttcttactgttttagtttttaattgacttgcaaaattgacacagggaacaattttagccaagcttttggttaatgtacaaactgctaccgtgctttacttttccctttgcctctttatctttcttttctcctctccaaggtacttgtgaagttttgttataaaatatgtgttttaaacagacgtgtaatgcttatttaactaaagctagacatggcaaaggctctgaacgtgagatgtcaatctgttagttggacacatttatgggaagctagtctcatttccacagagttgctaatggggcttagttgttcattactttaaatctgttgcagtaaacttcattttcagtcagtgttaaggaagaaacatgggaaagtgaaatcagtttcagtcctaattacttttttctctccaataggcctgagttaaagtgtgtatttggaatctacatgagtagatcaatcttgttttgtcacccagttaaatagtccatttcaggaaaacaatactaacccaggctgcagtgtatctgcacatgtcagctcttagttaaaaaatgataataatattaattacaattttttttcctttaatcctgaacgagtgtttatcacaaccagacaaatcctcatccaagtaattctttaaataaaacatttgagctcttattcggttggtatcttttccctcctggtatttaactctttcattgcagcagtgatttgtttagtgccagatgggcctgacagcgaaagggatttttttttttgttccacatttattcccccttctaaatttatcagctgttgcgattaaaagcccctcttttatccattgtgggaaagagttcaggataaagaaaactctccctttcaagccccctctctctccttctctattgtctatacactgaatcctctgacattatctgtaaggtaaacccgttagttccctggtaagaatgaggtcttaagaaatgtagagtctggatggccttcttccctgctaataaaatcaagggatttgctaaatacctctttcagattgggtcacgcagaacgcatttctttcatttttcatttttatttttacattctctttgttttattttaacaggtatattggtgcttcagaattaatggtcgtttttgaaaaggttgtttagttcagtttatcattcctcctgtggatattactcaggatatttcccaagtggttccaatgagcaggggaactagtgatacactcaagcgcacactccactagctgggttgatgcactgctcactatttatcaaagagaaacgaaaacatttatcccaattgctttcaaatgcagtttggtggtagaagttttttggaatacaatatctagtttatttgggtttgttcagaaggaaggtttaatcccctgtaaagtaacaaataccaataaaaacccttcttgagcggcatgaaatgctataaatcggcaaaagtaatctttttatgggtgtcccaacactaagcagacggtttttaaactactatacacccctaaagaaatgtacatatgataaagatttgtttttcaaaaaggctcaaatagttttaagtttcagttgtctatttttcttattttaatttgtatttttatacatcccagggaaaggttcctgtttaattgtatatttatttttctgaaagcaaaaatattgcccttttttcagtttttttttgtaaatttggacgataaggggatctaaatctatatgaaaggtatttttttttcttccccaatgagattctttacacactttgctttggtatatttcgaatgtgctcgtggagaaaataaattacagacatcctaaaaaaaaaaa

//