LOCUS       NM_001097397            1302 bp    mRNA    linear   VRT 30-AUG-2020
DEFINITION  Xenopus tropicalis solute carrier family 25 member 15, gene 2
            (slc25a15.2), mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001097397
VERSION     NM_001097397.1
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
REFERENCE   1  (bases 1 to 1302)
  AUTHORS   Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW and
            Richardson P.
  TITLE     Genetic and genomic tools for Xenopus research: The NIH Xenopus
            initiative
  JOURNAL   Dev. Dyn. 225 (4), 384-391 (2002)
   PUBMED   12454917
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC135300.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC135300.1 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           SAMD00028292, SAMD00028295
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Xenopus tropicalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8364"
                     /chromosome="2"
                     /map="2"
     gene            1..1302
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /note="solute carrier family 25 member 15, gene 2"
                     /db_xref="GeneID:100038284"
                     /db_xref="Xenbase:XB-GENE-973185"
     exon            1..178
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /inference="alignment:Splign:2.1.0"
     exon            179..291
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    216..218
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /note="upstream in-frame stop codon"
     CDS             237..1145
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /note="solute carrier family 25 (mitochondrial carrier;
                     ornithine transporter) member 15"
                     /codon_start=1
                     /product="mitochondrial ornithine transporter 1"
                     /protein_id="NP_001090866.1"
                     /db_xref="GeneID:100038284"
                     /db_xref="Xenbase:XB-GENE-973185"
                     /translation="

MPTNPVIQAAIDLTAGAAGGTACVLTGQPFDTAKVKMQTFPTMYRGLMDCAVKTYRQMGLRGFYRGTSPALLANIAENSVLFMSYGFCQKVVRQIVGLDKNAELSDVQNAASGSVASIFAALVLCPTELVKCRLQAMHELQVSGKILQGQNTVWSVVKGIVQREGPLAFYNGLTSTICREMPGYFLFFGGYEASRSFFASGGKSKDELGPMALIVSGGFGGIALWLAVYPIDCVKSRIQVLSISGKQAGFMKTFLHIVKNEGVLALYSGLKPTLIRAFPANGALFLAYEYSRRLMMNQLDCC"

     misc_feature    261..515
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    543..830
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    852..1127
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     exon            292..550
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /inference="alignment:Splign:2.1.0"
     exon            551..688
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /inference="alignment:Splign:2.1.0"
     exon            689..861
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /inference="alignment:Splign:2.1.0"
     exon            862..1020
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /inference="alignment:Splign:2.1.0"
     exon            1021..1270
                     /gene="slc25a15.2"
                     /gene_synonym="d13s327; hhh; orc1; ornt1; slc25a15"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

cccagactggcagctggtgaaaccctatactctctcatgtctctacctaggaatggctggcagccatggttctatagtgtgcgctccctgacaatgacattgctgcccgagagaaagtccttgtggaactgagcgtgtagttcatgggacctggcaggtgttacaggaggacattacaacaaaattgggccctattggatactttcgtttgtagttagtgccaagctgaccccatcatgccgacaaatccagtcatccaagctgctattgacctgactgcaggggctgccggtgggacagcatgcgtgttaacgggtcagccctttgacacagccaaggtgaaaatgcagactttccccaccatgtacagggggctcatggactgtgctgtgaagacttacagacaaatgggcctcagggggttctacagaggaaccagcccagcgcttctggcaaatatagctgagaattcagtacttttcatgagctacggcttttgccagaaagttgttcggcaaatagttggcttggacaagaacgcagaattaagtgatgtgcagaatgcagcttctggctcagtggcgtctattttcgctgccctcgtcctttgtcccacagagctagtgaagtgccgcctgcaagccatgcatgagctgcaagtatctggcaagatcctacaagggcagaatacagtgtggtctgtggtgaaagggattgtgcagcgtgagggtcccttggctttctataatggcctgacaagcactatatgcagagagatgcctggctatttcctattctttggggggtatgaggccagcagatccttctttgcttctggtggaaaatcaaaggatgaactaggtccaatggctctgatagtgagcgggggtttcggaggaattgccctgtggctggcagtgtaccccatagactgtgtcaaatccaggatccaggtgctctccatttctgggaaacaagctggattcatgaaaacctttttgcatattgtgaaaaatgaaggagtattggcgttatattctggcctgaaaccaactctaattcgtgcatttccagccaatggtgctctctttcttgcctatgaatacagcaggaggctcatgatgaaccaactggattgctgttgacattccctcccttttatatgtttctcaggattgcacacagaacaatggtttttatgtcatttcacaagcagtatatcagaaaggacctgtttgtcctaagttaaagaaagagaatatttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

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