2024-11-23 10:44:33, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS NM_001433432 1056 bp mRNA linear ROD 21-AUG-2024 DEFINITION Rattus norvegicus TGFB-induced factor homeobox 2-like, X-linked 2 (Tgif2lx2), mRNA. ACCESSION NM_001433432 XM_056985152 VERSION NM_001433432.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 1056) AUTHORS Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D. TITLE Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium JOURNAL Brief Bioinform 12 (5), 449-462 (2011) PUBMED 21873635 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAXUCZ010000021.1. On Aug 19, 2024 this sequence version replaced XM_056985152.2. ##Evidence-Data-START## Transcript is intronless :: SRR26360186.1207127.1, SRR26360181.232288.1 [ECO:0000345] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-1056 JAXUCZ010000021.1 88329775-88330830 FEATURES Location/Qualifiers source 1..1056 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="BN" /db_xref="taxon:10116" /chromosome="X" /map="Xq31" gene 1..1056 /gene="Tgif2lx2" /gene_synonym="RGD1561826" /note="TGFB-induced factor homeobox 2-like, X-linked 2" /db_xref="GeneID:367885" /db_xref="RGD:1561826" exon 1..1056 /gene="Tgif2lx2" /gene_synonym="RGD1561826" /inference="alignment:Splign:2.1.0" misc_feature 112..114 /gene="Tgif2lx2" /gene_synonym="RGD1561826" /note="upstream in-frame stop codon" CDS 118..786 /gene="Tgif2lx2" /gene_synonym="RGD1561826" /note="homeobox protein TGIF2LX" /codon_start=1 /product="TGFB-induced factor homeobox 2-like, X-linked 2" /protein_id="NP_001420361.1" /db_xref="GeneID:367885" /db_xref="RGD:1561826" /translation="
MEEAEGSPEETQDTNKKGTSSRIRLERTCKKKFRDSQKLQKRYLLPPESVRILRDWLSKHRFNAYPTEADKQKLSKKTNLSYLQVSNWFTNARRRLLPEILQNPDISHKDQAANAAQKQHSNPSNEVKTQLNAKSKMQDLPVPICQESQEKMSDLESYLGQKVISEGEKEKEDRNLISDPLSSPELAWPVEKPDFSNFYMLVDAAVQKAAEMEEQKKQNPNP"
ORIGIN
tgtctggcaacaaatgaggatccagttcagaaatcagtgaaggacttccctggatctcccgggatcatacttcagtcatccctggtctctaagccactgaaggcagtcctctagaacatggaggaggctgaaggtagtccggaggaaacccaggacactaataaaaaaggcacctcgagcaggataagacttgagagaacctgtaagaagaagtttcgtgacagccagaagcttcagaaaagatacctgctgccacccgagtccgtgaggatcctccgtgactggctctctaagcacaggtttaatgcctatcctactgaagcagacaaacaaaagctgtccaagaagaccaatttatcttacttgcaggtctccaactggtttacaaatgcccgcagacgccttctcccagaaattcttcaaaatccagacattagccacaaagaccaggctgccaatgcagcccagaaacagcactccaatccatccaatgaggtcaagacacagcttaatgctaaatcaaaaatgcaggatttgcccgtgccaatatgccaagaatctcaagagaaaatgtcagatctggagtcttatcttggccagaaggtgatctcagaaggcgagaaagaaaaagaagacaggaatttaatcagcgatcctctgtcttcacctgaacttgcatggccagtggaaaagcccgattttagcaacttctacatgttggttgatgctgctgtacagaaggcagcagaaatggaggagcagaagaagcaaaatcccaacccataatttccccaacaacagtcctttgaactctggtgggttcatttattttcaaccggatttatcttgtaatgtcgtcttctattccatattattccccctgttcagaaatcttttccattatcacatctcaattttgctaaatacctcaatgttttctgatgaaatcactatccatgatattcagcataaacaaatttttaacttcatctgctcccctgggctttaagaactatatatttacataatattaaacatcatgcaattttcagtcaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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