2025-03-04 02:56:51, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS NM_001108155 3326 bp mRNA linear ROD 20-SEP-2024 DEFINITION Rattus norvegicus kinesin family member 23 (Kif23), mRNA. ACCESSION NM_001108155 XM_001073723 XM_236313 VERSION NM_001108155.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 3326) AUTHORS Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C., Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L., Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B., Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R., Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F., Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and Warscheid,B. TITLE Quantitative high-confidence human mitochondrial proteome and its dynamics in cellular context JOURNAL Cell Metab 33 (12), 2464-2483 (2021) PUBMED 34800366 REFERENCE 2 (bases 1 to 3326) AUTHORS Kuo,J.C., Han,X., Hsiao,C.T., Yates,J.R. 3rd and Waterman,C.M. TITLE Analysis of the myosin-II-responsive focal adhesion proteome reveals a role for beta-Pix in negative regulation of focal adhesion maturation JOURNAL Nat Cell Biol 13 (4), 383-393 (2011) PUBMED 21423176 REFERENCE 3 (bases 1 to 3326) AUTHORS Chang,Y.C., Chen,Y.J., Wu,C.H., Wu,Y.C., Yen,T.C. and Ouyang,P. TITLE Characterization of centrosomal proteins Cep55 and pericentrin in intercellular bridges of mouse testes JOURNAL J Cell Biochem 109 (6), 1274-1285 (2010) PUBMED 20186884 REFERENCE 4 (bases 1 to 3326) AUTHORS Kamijo,K., Ohara,N., Abe,M., Uchimura,T., Hosoya,H., Lee,J.S. and Miki,T. TITLE Dissecting the role of Rho-mediated signaling in contractile ring formation JOURNAL Mol Biol Cell 17 (1), 43-55 (2006) PUBMED 16236794 REFERENCE 5 (bases 1 to 3326) AUTHORS Yuce,O., Piekny,A. and Glotzer,M. TITLE An ECT2-centralspindlin complex regulates the localization and function of RhoA JOURNAL J Cell Biol 170 (4), 571-582 (2005) PUBMED 16103226 REFERENCE 6 (bases 1 to 3326) AUTHORS Zhu,C., Zhao,J., Bibikova,M., Leverson,J.D., Bossy-Wetzel,E., Fan,J.B., Abraham,R.T. and Jiang,W. TITLE Functional analysis of human microtubule-based motor proteins, the kinesins and dyneins, in mitosis/cytokinesis using RNA interference JOURNAL Mol Biol Cell 16 (7), 3187-3199 (2005) PUBMED 15843429 REFERENCE 7 (bases 1 to 3326) AUTHORS Tomas,A., Futter,C. and Moss,S.E. TITLE Annexin 11 is required for midbody formation and completion of the terminal phase of cytokinesis JOURNAL J Cell Biol 165 (6), 813-822 (2004) PUBMED 15197175 REFERENCE 8 (bases 1 to 3326) AUTHORS Mishima,M., Kaitna,S. and Glotzer,M. TITLE Central spindle assembly and cytokinesis require a kinesin-like protein/RhoGAP complex with microtubule bundling activity JOURNAL Dev Cell 2 (1), 41-54 (2002) PUBMED 11782313 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473975.1. On or before Oct 4, 2007 this sequence version replaced XM_236313.4, XM_001073723.1. ##Evidence-Data-START## RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..3326 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /chromosome="8" /map="8q24" gene 1..3326 /gene="Kif23" /note="kinesin family member 23" /db_xref="GeneID:315740" /db_xref="RGD:1308596" exon 1..107 /gene="Kif23" /inference="alignment:Splign:2.1.0" misc_feature 22..24 /gene="Kif23" /note="upstream in-frame stop codon" CDS 97..2955 /gene="Kif23" /codon_start=1 /product="kinesin-like protein KIF23" /protein_id="NP_001101625.1" /db_xref="GeneID:315740" /db_xref="RGD:1308596" /translation="
MKSAKAKMPRKPVIKKGSQTNLKDPVGVYCRVRPLSFPDQECCVEVVNSTTVQLHTPEGYRLNRNGDYKETQYSFKRVFGTHTTQKELFDVVASPLVDDLIHGKNGLLFTYGVTGSGKTYTMTGSPGSGGLLPRCLNMIFNSIGSFQAKRFVFKSNDRNSMEIQCEVDALLERQKREAMPIPKTPSSKRQADPEFADMINVQEFCKAEEVDEDSVYGVFVSYIEIYNNYLYDLLEEVQFDPIKPKLPQSKMLREDKNHNMYVAGCTEVEVKSTEEAFEVFWRGQKKRRIANTHLNRESSRSHSVFSIKLVQAPLDADGDNVLQEKEQITISQLSLVDLAGSERTNRTKAEGNRLREAGNINQSLMTLRTCMEVLRENQMYGTNKMVPYRDSKLTHLFKNYFDGEGKVRMIVCVNPKAEDYEESLQVMRFAEVTQEVEVARPVDKAICGLTPGRRYRNLPRAGPVGDEPLTEEILQSFPPLPPCKLLDVNDEETLPRLMDALEKRHRLRQLMTEELNKQCVAFKALFKEFDNSLSNKENYIQEKLNEKEKVISGQKSEIERLEKKNKTLEYKIEILEKTTTIYEEDKRNLQQELESQHQKLQREFSDKRRLEARLQGMVTETTMKWQKECERRVAATQLEMQNKLWVKDEKLKQLKAIVTEPKPEKPERPSRDRDREKIIQRSVSPSPVPLSSNNIAQISNGQQLMSQPQLHRRSNSCSSISVASCISEWEQKLSPFSTPVNVTSLARHRQQEPGQSKACMVSDRRRGMCWTEGREMVPTFSSEIGVQEDHCRRNTPIPVRHRRSRSAGSRWVDHKPASNVQTETVMQPHVPHAITVSVANEKALAKCEKYMLTHQELASDGEIQTKVIKGDVYKTRGGGQSVQFTDIETLKQESPTGSRKRRSSTLAPAQPDGTESEWTDVETRCSVAVEMRAGSQLGPGYQHHAQPKRKKP"
misc_feature 166..1398 /gene="Kif23" /note="Kinesin motor domain, KIF23-like subgroup; Region: KISc_KIF23_like; cd01368" /db_xref="CDD:276819" misc_feature order(193..195,430..432,439..441,445..456,1105..1107) /gene="Kif23" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:276819" misc_feature order(1261..1263,1270..1272,1279..1281) /gene="Kif23" /note="microtubule interaction site [polypeptide binding]; other site" /db_xref="CDD:276819" misc_feature <1600..>2100 /gene="Kif23" /note="DNA double-strand break repair ATPase Rad50; Region: PRK03918" /db_xref="CDD:235175" misc_feature 2482..2790 /gene="Kif23" /note="Arf6-interacting domain of mitotic kinesin-like protein 1; Region: MKLP1_Arf_bdg; pfam16540" /db_xref="CDD:465166" exon 108..177 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 178..306 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 307..412 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 413..549 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 550..659 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 660..830 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 831..943 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 944..1065 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 1066..1168 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 1169..1248 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 1249..1368 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 1369..1495 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 1496..1651 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 1652..1809 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 1810..1983 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 1984..2163 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 2164..2475 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 2476..2703 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 2704..2786 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 2787..2868 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 2869..2939 /gene="Kif23" /inference="alignment:Splign:2.1.0" exon 2940..3326 /gene="Kif23" /inference="alignment:Splign:2.1.0" ORIGIN
gcggccgcagcctccacggcttagttcccgccagccctgctccggtcggagcccgacgtcccgcgcgcgcgtcaggacagcacggagactgcggtcatgaagtcggcgaaggctaagatgcccaggaaacctgtaataaaaaaaggatctcagacaaaccttaaagatccagtgggggtgtactgtagggtgcgcccactgagctttcctgaccaagagtgctgtgtggaagtggtcaatagtacaaccgtgcagctccacacccctgagggctatcgactcaacagaaatggagactacaaggagactcagtactcatttaagcgggtatttggcacgcacaccacccagaaggagctttttgatgttgtggctagtcccttggtagatgacctcattcatggcaagaatggtcttttatttacatatggtgtgacgggaagtggaaaaacctacacaatgacagggtctccagggtccggaggcctgcttcctcgttgtttgaatatgatctttaacagcatagggtcatttcaagcaaaacgtttcgtgtttaagtctaatgataggaacagtatggaaatacagtgtgaagtcgatgccttgttagaacggcagaaaagagaagccatgcccattccaaagaccccctctagcaagcgacaagcagatccagagtttgcagatatgataaatgtacaagaattctgcaaagcagaagaagttgatgaagacagtgtctatggagtgtttgtctcttacattgaaatctataataattacctatatgatctattggaagaagtgcagtttgatcccataaagcccaaactcccacaatctaaaatgctccgagaagataagaaccacaatatgtatgttgcaggatgtacagaagtagaagtgaagtctacggaggaggcgttcgaggttttctggagaggtcagaaaaagagacgtattgctaacacccatttgaatagagagtccagtcgttcacatagcgtgttcagcattaaacttgtccaggctcccctggatgctgatggagacaatgtcttacaggaaaaagagcaaattactataagccagctgtctttggtagatcttgctggaagtgaaagaactaaccgtactaaagcagaagggaacaggttacgtgaagctggaaacattaatcagtcattgatgacactaagaacatgcatggaagtcctgagagagaaccagatgtatggaaccaacaagatggttccatatcgagattcaaagctaacgcatctattcaagaactactttgatggggaggggaaggttcggatgatcgtgtgtgtgaatcctaaggctgaagactatgaagaaagcttgcaagtcatgagatttgctgaagtaacccaagaagtggaagtagcaagaccagtagacaaggcgatatgtggcctgacaccggggagacggtacagaaacctgcctcgggcgggcccagttggagatgaacctttgactgaagagattctacagagcttcccaccactgcccccatgcaagcttttggatgtcaatgatgaggagacccttccaagactgatggatgctttggagaaacgacatcgcttacgacaactgatgactgaggagcttaacaaacaatgtgtagctttcaaagccttattcaaagaatttgacaattctctatcaaataaagaaaactacattcaggaaaaactaaatgaaaaagaaaaagtgatctcaggacagaaatcagaaatagaacgactggagaagaaaaacaaaactttggagtacaagattgagattttggagaaaacaactacgatctatgaagaagataagcgcaatctgcagcaggagcttgaaagccagcatcagaagctccagcgggagttttctgacaagcgcagattagaagccaggttgcaaggcatggtgacagaaacgacgatgaagtggcagaaggaatgtgagcgtcgggtggcagccacccagctagagatgcagaacaaactctgggtcaaagatgaaaagctcaaacagctgaaggccattgtgactgaacccaaacctgagaagccagagagaccctcccgggaccgggaccgggagaaaatcattcagagatctgtctctccttcacctgtgcctctttctagtaacaatattgctcagatttccaacggccagcaactcatgagccagccccagcttcacagacgctctaactcttgcagcagcatttctgtagcttcctgtatttcggaatgggagcagaaactgtctccattcagcacccctgtcaatgtcacctctcttgcaaggcacaggcagcaggagccaggacaaagtaaagcgtgtatggtgtcagacagaaggcgagggatgtgctggactgaaggcagggagatggtccctacattcagcagtgagataggcgtacaagaggaccactgccgcaggaacacaccaattcctgtacgacacagaaggtcccgctctgcagggagcagatgggtagatcataagcctgcctctaatgtgcaaactgagacagtcatgcagccacatgtccctcatgccatcacagtgtctgttgcaaatgaaaaggcactagctaagtgtgagaagtacatgctgacccaccaggaactggcctctgatggggagattcagactaaagtaattaagggtgatgtttataagacgagaggaggtggacagtcggttcagtttactgatattgagactttaaaacaagaatcgccaactggtagtcgaaaacgaagatcgtccacactagcacctgcccaacccgatggtacagagtctgaatggaccgatgtagaaacaaggtgttctgttgctgttgaaatgagagcaggatctcagctgggacccggatatcagcaccacgcacaacccaagcgcaagaaaccttgaactgacaaccctggtgacagaaggaggttttttgctcgtgttggtgatttacccaaagccgcaccagatgcagtgtcttgagtcgtcttgcagaagaatgtgtctagatcacattgccttttttattgtgacttttcaactgttctgaatattttctaagattttataaaaaacaaacaaatgctgctattgattagctgcaaaaaaatgcactttagacatatttaacaattaagatttttcaaagtaaaaatggtgactggccaatggttaaaccattttagggaaggtatttagaattttgtatgtatatattcactctctgacctttatatatgccaaaacagctaaataaaaaagcactcagaggc
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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