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Previous release (v1)
2025-01-31 12:03:29, GGRNA.v2 : RefSeq release 227 (Nov, 2024)
LOCUS NM_001107335 5878 bp mRNA linear ROD 17-SEP-2024
DEFINITION Rattus norvegicus death associated protein kinase 1 (Dapk1), mRNA.
ACCESSION NM_001107335 XM_001060919 XM_225138
VERSION NM_001107335.2
KEYWORDS RefSeq; RefSeq Select.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 5878)
AUTHORS Zhang,X., Fan,L., Yang,L., Jin,X., Liu,H., Lei,H., Song,X.,
Zhang,Z., Zhang,F. and Song,J.
TITLE DAPK1 mediates cognitive dysfunction and neuronal apoptosis in PSD
rats through the ERK/CREB/BDNF signaling pathway
JOURNAL Behav Brain Res 471, 115064 (2024)
PUBMED 38777261
REMARK GeneRIF: DAPK1 mediates cognitive dysfunction and neuronal
apoptosis in PSD rats through the ERK/CREB/BDNF signaling pathway.
REFERENCE 2 (bases 1 to 5878)
AUTHORS Zhou,Y., Zhang,X., Yang,H., Chu,B., Zhen,M., Zhang,J. and Yang,L.
TITLE Mechanism of cAMP Response Element-binding Protein
1/Death-associated Protein Kinase 1 Axis-mediated Hippocampal
Neuron Apoptosis in Rat Brain Injury After Cardiopulmonary
Resuscitation
JOURNAL Neuroscience 526, 175-184 (2023)
PUBMED 37406926
REMARK GeneRIF: Mechanism of cAMP Response Element-binding Protein
1/Death-associated Protein Kinase 1 Axis-mediated Hippocampal
Neuron Apoptosis in Rat Brain Injury After Cardiopulmonary
Resuscitation.
REFERENCE 3 (bases 1 to 5878)
AUTHORS Zafari,F., Shirian,S., Sadeghi,M., Teimourian,S. and Bakhtiyari,M.
TITLE CD93 hematopoietic stem cells improve diabetic wound healing by
VEGF activation and downregulation of DAPK-1
JOURNAL J Cell Physiol 235 (3), 2366-2376 (2020)
PUBMED 31549396
REMARK GeneRIF: CD93 hematopoietic stem cells improve diabetic wound
healing by VEGF activation and downregulation of DAPK-1.
REFERENCE 4 (bases 1 to 5878)
AUTHORS Zhai,C.L., Tang,G.M., Qian,G., Hu,H.L., Wang,S.J., Yin,D. and
Zhang,S.
TITLE MicroRNA-98 attenuates cardiac ischemia-reperfusion injury through
inhibiting DAPK1 expression
JOURNAL IUBMB Life 71 (2), 166-176 (2019)
PUBMED 30419147
REMARK GeneRIF: MicroRNA-98 attenuates cardiac ischemia-reperfusion injury
through inhibiting DAPK1 expression.
REFERENCE 5 (bases 1 to 5878)
AUTHORS Li,D., Xu,D., Xu,Y., Chen,L., Li,C., Dai,X., Zhang,L. and Zheng,L.
TITLE MicroRNA-141-3p targets DAPK1 and inhibits apoptosis in rat ovarian
granulosa cells
JOURNAL Cell Biochem Funct 35 (4), 197-201 (2017)
PUBMED 28543175
REMARK GeneRIF: data indicate that miR-141-3p may inhibit ovarian
granulosa cell apoptosis via targeting DAPK1 and is involved in the
etiology of polycystic ovary syndrome.
REFERENCE 6 (bases 1 to 5878)
AUTHORS Tian,J.H., Das,S. and Sheng,Z.H.
TITLE Ca2+-dependent phosphorylation of syntaxin-1A by the
death-associated protein (DAP) kinase regulates its interaction
with Munc18
JOURNAL J Biol Chem 278 (28), 26265-26274 (2003)
PUBMED 12730201
REFERENCE 7 (bases 1 to 5878)
AUTHORS Tada,Y., Wada,M., Taguchi,K., Mochida,Y., Kinugawa,N.,
Tsuneyoshi,M., Naito,S. and Kuwano,M.
TITLE The association of death-associated protein kinase hypermethylation
with early recurrence in superficial bladder cancers
JOURNAL Cancer Res 62 (14), 4048-4053 (2002)
PUBMED 12124340
REFERENCE 8 (bases 1 to 5878)
AUTHORS Jin,Y., Blue,E.K., Dixon,S., Hou,L., Wysolmerski,R.B. and
Gallagher,P.J.
TITLE Identification of a new form of death-associated protein kinase
that promotes cell survival
JOURNAL J Biol Chem 276 (43), 39667-39678 (2001)
PUBMED 11485996
REFERENCE 9 (bases 1 to 5878)
AUTHORS Inbal,B., Shani,G., Cohen,O., Kissil,J.L. and Kimchi,A.
TITLE Death-associated protein kinase-related protein 1, a novel
serine/threonine kinase involved in apoptosis
JOURNAL Mol Cell Biol 20 (3), 1044-1054 (2000)
PUBMED 10629061
REFERENCE 10 (bases 1 to 5878)
AUTHORS Deiss,L.P., Feinstein,E., Berissi,H., Cohen,O. and Kimchi,A.
TITLE Identification of a novel serine/threonine kinase and a novel 15-kD
protein as potential mediators of the gamma interferon-induced cell
death
JOURNAL Genes Dev 9 (1), 15-30 (1995)
PUBMED 7828849
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
JAXUCZ010000017.1.
On Oct 29, 2008 this sequence version replaced NM_001107335.1.
Sequence Note: The RefSeq transcript and protein were derived from
genomic sequence to make the sequence consistent with the reference
genome assembly. The genomic coordinates used for the transcript
record were based on alignments.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR26643287.33258.1,
SRR26643290.49099.1 [ECO:0000332]
RNAseq introns :: mixed sample support SAMEA5760383,
SAMEA5760386 [ECO:0006172]
##Evidence-Data-END##
##RefSeq-Attributes-START##
RefSeq Select criteria :: based on conservation, expression
##RefSeq-Attributes-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-164 JAXUCZ010000017.1 4096418-4096581 c
165-336 JAXUCZ010000017.1 4095933-4096104 c
337-558 JAXUCZ010000017.1 4006991-4007212 c
559-697 JAXUCZ010000017.1 3990495-3990633 c
698-827 JAXUCZ010000017.1 3989235-3989364 c
828-876 JAXUCZ010000017.1 3989026-3989074 c
877-903 JAXUCZ010000017.1 3988911-3988937 c
904-1056 JAXUCZ010000017.1 3987453-3987605 c
1057-1102 JAXUCZ010000017.1 3987065-3987110 c
1103-1192 JAXUCZ010000017.1 3985495-3985584 c
1193-1285 JAXUCZ010000017.1 3984228-3984320 c
1286-1405 JAXUCZ010000017.1 3981968-3982087 c
1406-1504 JAXUCZ010000017.1 3981421-3981519 c
1505-1603 JAXUCZ010000017.1 3980253-3980351 c
1604-1702 JAXUCZ010000017.1 3979110-3979208 c
1703-1900 JAXUCZ010000017.1 3978086-3978283 c
1901-2098 JAXUCZ010000017.1 3976706-3976903 c
2099-2197 JAXUCZ010000017.1 3972059-3972157 c
2198-2275 JAXUCZ010000017.1 3967165-3967242 c
2276-2498 JAXUCZ010000017.1 3953062-3953284 c
2499-2687 JAXUCZ010000017.1 3952020-3952208 c
2688-2885 JAXUCZ010000017.1 3950075-3950272 c
2886-3024 JAXUCZ010000017.1 3949039-3949177 c
3025-3145 JAXUCZ010000017.1 3947460-3947580 c
3146-3334 JAXUCZ010000017.1 3942004-3942192 c
3335-5878 JAXUCZ010000017.1 3935826-3938369 c
FEATURES Location/Qualifiers
source 1..5878
/organism="Rattus norvegicus"
/mol_type="mRNA"
/strain="BN"
/db_xref="taxon:10116"
/chromosome="17"
/map="17p14"
gene 1..5878
/gene="Dapk1"
/note="death associated protein kinase 1"
/db_xref="GeneID:306722"
/db_xref="RGD:1311629"
exon 1..164
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 165..336
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
misc_feature 263..265
/gene="Dapk1"
/note="upstream in-frame stop codon"
CDS 275..4567
/gene="Dapk1"
/EC_number="2.7.11.1"
/codon_start=1
/product="death-associated protein kinase 1"
/protein_id="NP_001100805.2"
/db_xref="GeneID:306722"
/db_xref="RGD:1311629"
/translation="
MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIRHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILSGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYDFEEEFFRNTSTLAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKFAARKKWKQSVRLISLCQRLSRSFLSRSNMSVARSDDTLDEEDSFVMKAIIHAINDDNVPGLQHLLGSLSSYDVNQPNKHGTPPLLIAAGCGNIQMLQLLIKRGSRIDVQDKGGSNAIYWASRHGHVDTLKFLNENKCPLDVKDKSGETALHVAARYGHADVVQLLCSFGSNPDFQDKEEETPLHCAAWHGYYSVARALCEVGCNVNIKNREGETPLLTASARGYHDIVECLAEHGADLNASDKDGHIALHLAVRRCQMEVIKTLLGHGCLVDFQDRHGNTPLHVACKDGSAPIVVALCEASCNLDISNKYGRTPLHLAANNGILDVVRYLCLMGANVEALTLDGKTAEDLAKAEQHEHVAGLLARLRKDTHRGLFIQQLRPTQNLQPRIKLKLFGHSGSGKSTLVESLKCGLLRSFFRRRRPRLSSTNSTRFPPSPLATKPTVSVSINNLYPGCENVSVRSRSMMFEPGLTKGMLEVFVAPSHHLHCSTDDQSTKAIDIQNAYLNGVGDFSVWEFSGNPVYFCCYDYFAANDPTSIHIIVFSLEEPYEIQLNQVIFWLSFLKSLVSVEEPIAFGGKLKNPLRVVLVATHADIMNIPRPAGGEFGYDKDTSLLKEIRNRFGNDLHVSNKLFVLDAGASGSKDIKVLRNHLQEIRSQIVSGCPPMTHLCEKIISTLPSWRKLNGPNQLMSLQQFVYDVQDQLNPLASEDDLRRIAQQLHSTGEINIMQSETVQDVLLLDPRWLCTNVLGKLLSVETPRALHHYRGRYTMEDIQRLVPDSDVEELLQILDAMDICARDLSSGTMVDIPALIKTDSLQRSWADEEDEVMVYGGVRIVPVEHLTPFPCGIFHKVQVNLCRWIHQQSTEGDADIRLWVSGCRIANRGAELLVLLVNHGQGIEVQVRGLETEKIKCCLLLDSVCSTIETVMATTLPGLLTVKHYLSPQQLREHHEPVMVYQPRDFFRAQTLKESSLTNTMGGYKESFSSITCFGCHDVYSQASLGMDIHASDLSLLTRRKLSRLLDPPDPMGKDWCLLAMNLGLPDMVAKHNVNTRASRDFLPSPVHALLQEWTSYPESTVGILISKLRELGRRDAADFLLKASSVFKINLDGNGQEAYASSCNSGTSYNSISSVVSR"
misc_feature 293..1099
/gene="Dapk1"
/note="Catalytic domain of the Serine/Threonine Kinase,
Death-Associated Protein Kinase 1; Region: STKc_DAPK1;
cd14194"
/db_xref="CDD:271096"
misc_feature order(326..328,335..337,341..346,431..436,572..574,
581..583,590..595,938..940)
/gene="Dapk1"
/note="CaM binding site [polypeptide binding]; other site"
/db_xref="CDD:271096"
misc_feature order(329..349,353..355,392..394,398..400,503..505,
551..556,560..562,572..574,578..580,689..691,695..697,
701..706,710..712,752..757,764..766,809..820)
/gene="Dapk1"
/note="active site"
/db_xref="CDD:271096"
misc_feature order(329..349,353..355,392..394,398..400,503..505,
551..556,560..562,572..574,689..691,701..706,710..712,
752..757)
/gene="Dapk1"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:271096"
misc_feature order(341..343,572..574,578..580,689..691,695..697,
701..703,764..766,809..820)
/gene="Dapk1"
/note="polypeptide substrate binding site [polypeptide
binding]; other site"
/db_xref="CDD:271096"
misc_feature 752..820
/gene="Dapk1"
/note="activation loop (A-loop); other site"
/db_xref="CDD:271096"
misc_feature <1286..1501
/gene="Dapk1"
/note="Ankyrin repeats (3 copies); Region: Ank_2;
pfam12796"
/db_xref="CDD:463710"
misc_feature 1406..1501
/gene="Dapk1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 1448..2278
/gene="Dapk1"
/note="Ankyrin repeat [Signal transduction mechanisms];
Region: ANKYR; COG0666"
/db_xref="CDD:440430"
misc_feature 1508..1600
/gene="Dapk1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature order(1511..1513,1523..1528,1535..1543,1547..1552,
1562..1564,1571..1573,1598..1600,1604..1606,1610..1612,
1622..1627,1634..1642,1646..1651,1661..1663,1670..1672,
1697..1699,1703..1705,1709..1711,1721..1726,1733..1741,
1745..1750,1760..1762,1769..1771,1796..1798)
/gene="Dapk1"
/note="oligomer interface [polypeptide binding]; other
site"
/db_xref="CDD:293786"
misc_feature 1604..1699
/gene="Dapk1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 1703..1798
/gene="Dapk1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 1802..1897
/gene="Dapk1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 1901..1996
/gene="Dapk1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 2000..2095
/gene="Dapk1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 2099..2188
/gene="Dapk1"
/note="ANK repeat [structural motif]; Region: ANK repeat"
/db_xref="CDD:293786"
misc_feature 4196..4453
/gene="Dapk1"
/note="Death domain found in death-associated protein
kinase 1; Region: Death_DAPK1; cd08782"
/db_xref="CDD:260052"
exon 337..558
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 559..697
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 698..827
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 828..876
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 877..903
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 904..1056
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 1057..1102
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 1103..1192
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 1193..1285
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 1286..1405
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 1406..1504
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 1505..1603
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 1604..1702
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 1703..1900
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 1901..2098
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 2099..2197
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 2198..2275
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 2276..2498
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 2499..2687
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 2688..2885
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 2886..3024
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 3025..3145
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 3146..3334
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
exon 3335..5878
/gene="Dapk1"
/inference="alignment:Splign:2.1.0"
ORIGIN
ggagccgcgagcgcagcggaggaggagggcgctgaagaggtggtggctgtgtccccgcggggccgagctgcgcccgactcacggagcggaggccactcggagctcccccggatccggacccgccgcggggatcagggcgctcggagcgagaggtgcggggccggaggtctgcggcttggtgcatgaggggcccgcagcggcgcggcgacggtggggatggttcgggccgcggagccggagtggcctgggctttggtgaggcgtgacagtctatcatgactgtgttcaggcaggaaaacgtggacgactactacgacaccggcgaggaactgggcagcggacagttcgccgttgtgaagaaatgtcgtgagaaaagtaccggtcttcagtatgcggccaagttcatcaagaaaaggaggaccaagtccagccggcggggcgtgagccgagaggacatcgagcgggaggtcagcatcctgaaggagatccggcacccaaacgtcatcaccctgcatgaggtctacgagaacaagacagacgtcattctgatcctggagcttgttgcaggaggcgagctgtttgacttcctggctgagaaggaatctctcactgaagaagaagcaaccgagttcctcaagcagatcctcagcggcgtttactacctgcactcgcttcaaatcgcccactttgacctgaagccggaaaacataatgcttctggatagaaatgtgcccaaacctcggatcaagatcatcgacttcggcctggcccataaaattgactttggaaatgaattcaaaaacatatttgggacaccagagtttgtggctccggagatcgtcaactatgagccccttggtcttgaggcagacatgtggagcattggggtaataacctatatcctcctaagcggggcctccccttttcttggagacaccaagcaagaaacattagcgaatgtatctgctgtcaactatgactttgaggaggaattcttccgcaacaccagtacccttgccaaagatttcatcagaaggctgctggtcaaggatccaaagaagaggatgacaatccaggacagtttgcagcacccctggatcaagcctaaagacacccaacaagcacttagtcgaaaagcctcagcagtaaacatggagaaattcaagaagtttgcagctcggaaaaaatggaaacaatctgttcgcttgatatcactgtgccaaagattatccaggtcatttttgtccagaagtaacatgagcgttgccaggagcgatgatactctggatgaggaagactcctttgtgatgaaagccatcattcatgccatcaatgatgacaacgtccccggcctgcagcacctcctgggctcattgtccagctatgatgtcaaccagcccaacaagcacgggacacctccattactgattgctgcaggctgtgggaatattcagatgttacagttactcataaaacggggctcaaggatcgacgtccaggataagggaggatccaatgctatctactgggcctctcggcatggccatgtggatactttgaagtttctcaatgagaacaaatgccctttggatgttaaagacaagtctggagagacagctcttcacgtggcagcccgctatggccatgcagatgtggttcaactcttgtgcagttttggctctaatcctgatttccaggacaaggaagaggaaacccccctgcactgtgctgcctggcacggctattactccgtggctagagctctttgtgaagttggctgtaacgtgaatatcaagaaccgggagggagagaccccactgctgacagcttctgccaggggctaccatgacattgtggagtgtctggctgaacatggagctgacctgaatgcttctgacaaggatgggcacatcgcccttcatcttgctgtgaggcgctgtcagatggaggtcatcaagaccctccttggccatgggtgccttgtggatttccaggatcggcatggcaacacccccctgcatgtggcctgcaaagatgggagcgcgcccatcgtggtggccctctgtgaagccagctgcaacctggacatctcaaacaagtatggtcggactcctctccaccttgcagccaacaacgggatcctagatgtggtccgctacctctgcctgatgggcgccaacgtggaggctctgaccttggatggcaagacggccgaggacctcgccaaggcagagcagcacgagcacgtggcagggctcctggcaagactgcggaaggacacacaccgagggctcttcatccagcagctccgacccacgcagaatctccagcccagaatcaagctcaaactgtttggccactcgggatcggggaaatccacactggtggaatctctcaagtgtgggctgttaaggagtttcttcagaaggcgccggcccagactgtcctctaccaactccacccgcttcccaccgtcgcccctggctactaagccaacagtctcagtgagcattaacaacctgtaccccggctgtgagaatgtgagcgtgaggagccgaagcatgatgtttgagccaggcctcaccaaagggatgctggaagtgttcgtggctccgtctcaccacctacactgctcgaccgatgaccagtccaccaaagccatcgacatccagaatgcttacttgaacggagttggtgatttcagcgtatgggagttctctggaaaccctgtgtacttctgttgctatgactacttcgccgccaacgatcccacatccatccacatcatcgttttcagtctcgaagaaccctatgagatccagctgaaccaagtgattttctggcttagtttcttgaagtctctggtctcagttgaagaacccatagcatttggaggcaagctgaagaaccctctccgagttgtcctggtggccacacatgctgacatcatgaacatccctcggcctgctgggggcgagtttggatatgataaagatacatccttgctgaaagagatcaggaacaggtttgggaatgaccttcatgtctcaaataagctgtttgtgctggatgcaggagcatctgggtctaaggacatcaaggttctccggaatcacctgcaagaaatacggagtcagattgtctcggggtgccctcccatgactcatctgtgtgagaagatcatctccactctgccctcctggcggaagctcaacgggccaaaccagctgatgtcgctccagcagtttgtgtatgacgtgcaggaccagctgaaccccctggcctccgaggatgacctcaggcgcattgcacagcagctgcacagcacgggagagatcaacatcatgcagagtgagacagtgcaggatgtgttgctgctggatcctcgatggctctgcaccaacgtcctggggaagctgctgtctgtggagactccccgagccctgcaccattatcggggccgctacaccatggaagatatccagcgtctggtccccgacagtgacgtggaggagctgctgcagatcctggatgccatggatatctgcgcccgagacctgagtagcgggactatggtggatatccctgctctaatcaaaacagacagcctgcagcgctcctgggccgatgaggaagacgaggtgatggtgtacggaggtgtgcgcatcgtccctgtagagcacctcactcccttcccctgtggcatctttcacaaagttcaggtcaacctgtgccggtggatccaccagcagagcactgagggggacgcggacatccgtctgtgggtgagcggctgcaggatcgccaaccgtggggctgagttgctggtgctgctggtcaatcacggtcagggcattgaggtacaggtgcgtggactggagaccgagaagattaagtgctgcctgctgctggactcggtgtgcagcaccatcgagactgtcatggccaccaccttgccagggctgttgacggtgaagcactacctgagcccccagcagctaagggagcatcacgaaccagtcatggtctaccagccccgggacttcttccgtgcgcagaccctgaaagagagctccctcaccaacaccatgggagggtacaaggagagcttcagcagcatcacgtgctttgggtgtcacgatgtctactcacaggccagtcttggcatggacatccatgcatcagacctgagtctcctgacccggaggaaactgagtcgtcttcttgacccaccggaccccatggggaaggactggtgccttctggccatgaacttgggcctcccggacatggtggccaaacacaacgtcaataccagggcttctagggatttcctccccagcccagtgcatgccttgctacaggaatggacctcctaccctgagagcacggtgggcatccttatatccaaacttcgggagctggggcgccgggatgctgcggactttttactgaaggcctcctctgtgttcaagatcaaccttgacggcaatggccaggaggcctatgcctcaagctgtaacagtggcacatcctacaattccataagctcagtggtgtcccggtgagggcagccttggcttgggtagggtctttatggactgacgtgcaagggcggaggggagggggcagcccacccttctcagtgcaggttcccactcactccttctggtcgcgaggacacctccctctacccagtcctctgcttcccggcctcggtccccctcccacccacgcatccctcagccaagagcagaccatgtggttcacttcggtcacttgggaagccagagcccctcctgtcagtgttttggactctgtatcttgtcctctaataccttgcttcttaccaataattttattggaattccaaacttttcaatgaaaaaaaaaattcaactcctttattgattatccttaccaaaaaaaaagaaagaaaggaaagaaagaaagacacacacacatttatccgtaatgtgtatttcttatctttttctctgctgtaccggcccctcagcttatctcttttatgtttgtaggagagactcccatgcttggaccccactgtatgatttataaacagacaatatgtgagtgccttttgcagaagagggtgtgttgaatcatctgagtcagcccggagctgtcaccaaggaaacgctacctctctgtcccttgctgtgtgctgatcatcgccagaggtgcttcactctgacttgttggttttgggatttttttttctttccttctttttctttcttttcctagggagggggctctgtgttttgtttggcaaggaaagaggagaaaggagtcctccccagagtgttcatggccagtgttgctgtaagaagacatttttggttgcttttgtgggaagttccatgtgaaggtgcacatgagacctagagacggtcacgcttcctcactccctcccttctcaggtagaaggttgacttagggtagggttatggagacctgtgttaattaagaattctgaagactgcaactcgtaacccatgacagtcggttattgtcggtgcatagcacttgggttctacgctgagatcctggtttgatcacttcctgtacttgaagcctgagagaaaggaaatagagggaacacgttttcttggggtgattgagattgtgatcgaattttaaatcagcgtgagggaatgtgttttaagtcttctgtcccgagaagcatgtaatgttaccatatcatctgtacatatatatatatgcactatgtatatacatatatattgatactggtatttttacttaatctataagatgtcgtaagataatcaagtttggtttttttcctctctcttcttttgttttataaataaacggttgcttattgcatttga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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