LOCUS       NM_001401650            2231 bp    mRNA    linear   PLN 17-FEB-2024
DEFINITION  Oryza sativa Japonica Group WUSCHEL-related homeobox 7-like
            (LOC4326320), mRNA.
ACCESSION   NM_001401650 XM_026019881
VERSION     NM_001401650.1
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I.,
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C.J.,
            Ohtsuki,K., Shishiki,T., Otomo,Y., Murakami,K., Iida,Y., Sugano,S.,
            Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T.,
            Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A.,
            Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J.,
            Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R.,
            Ueda,M., Matsubara,K., Kawai,J., Carninci,P., Adachi,J., Aizawa,K.,
            Arakawa,T., Fukuda,S., Hara,A., Hashizume,W., Hayatsu,N.,
            Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H.,
            Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M., Hayashizaki,Y.
            and Yasunishi,A.
  CONSRTM   Rice Full-Length cDNA Consortium; National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team;
            Foundation of Advancement of International Science Genome
            Sequencing & Analysis Group; RIKEN
  TITLE     Collection, mapping, and annotation of over 28,000 cDNA clones from
            japonica rice
  JOURNAL   Science 301 (5631), 376-379 (2003)
   PUBMED   12869764
  REMARK    Erratum:[Science. 2003 Sep;301(5641):1849]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AP014957.1.
            
            On Feb 17, 2022 this sequence version replaced XM_026019881.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00008650,
                              SAMN07124405 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-431               AP014957.1         27292266-27292696   c
            432-1568            AP014957.1         27290980-27292116   c
            1569-2231           AP014957.1         27288393-27289055   c
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="1"
                     /map="1"
     gene            1..2231
                     /gene="LOC4326320"
                     /gene_synonym="OsWOX7; WOX7"
                     /note="WUSCHEL-related homeobox 7-like"
                     /db_xref="GeneID:4326320"
     exon            1..431
                     /gene="LOC4326320"
                     /gene_synonym="OsWOX7; WOX7"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    215..217
                     /gene="LOC4326320"
                     /gene_synonym="OsWOX7; WOX7"
                     /note="upstream in-frame stop codon"
     CDS             260..1861
                     /gene="LOC4326320"
                     /gene_synonym="OsWOX7; WOX7"
                     /note="OSJNBb0063G05.20; homeodomain transcription
                     factor-like; OSJNBb0063G05.19; LOC_Os01g47710"
                     /codon_start=1
                     /product="wUSCHEL-related homeobox 7"
                     /protein_id="NP_001388579.1"
                     /db_xref="GeneID:4326320"
                     /translation="

MASSNRHWPSMFRSKHATQPWQTQPDMAGSPPSLLSGSSAGSAGGGGYSLKSSPFSSVGEERVPDPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWFQNRKSRSKNKLRSGGTGRAGLGLGGNRASAPAAAHREAVAPSFTPPPPILPAPQPVQPQQQLVSPVAAPTSSSSSSSDRSSGSSKPARATSTQAMSVTTAMDLLSPLAAACHQQMLYQGQPLESPPAPAPKVHGIVPHDEPVFLQWPQSPCLSAVDLGAAILGGQYMHLPVPAPQPPSSPGAAGMFWGLCNDVQAPNNTGHKSCAWSAGLGQHWCGSADQLGLGKSSAASIATVSRPEEAHDVDATKHGLLQYGFGITTPQVHVDVTSSAAGVLPPVPSSPSPPNAAVTVASVAATASLTDFAASAISAGAVANNQFQGLADFGLVAGACSGAGAAAAAAAPEAGSSVAAVVCVSVAGAAPPLFYPAAHFNVRHYGDEAELLRYRGGSRTEPVPVDESGVTVEPLQQGAVYIVVM"

     misc_feature    260..481
                     /gene="LOC4326320"
                     /gene_synonym="OsWOX7; WOX7"
                     /note="propagated from UniProtKB/Swiss-Prot (Q0JKK6.2);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    458..640
                     /gene="LOC4326320"
                     /gene_synonym="OsWOX7; WOX7"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
     misc_feature    632..895
                     /gene="LOC4326320"
                     /gene_synonym="OsWOX7; WOX7"
                     /note="propagated from UniProtKB/Swiss-Prot (Q0JKK6.2);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     exon            432..1568
                     /gene="LOC4326320"
                     /gene_synonym="OsWOX7; WOX7"
                     /inference="alignment:Splign:2.1.0"
     exon            1569..2231
                     /gene="LOC4326320"
                     /gene_synonym="OsWOX7; WOX7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

aatgtgcaagaaaccattccatccatccatccacctatcctagctagggagataagaggaacactcctagctcgtctactcctagctctctcgtccaatccggccggtccctgtcgcctcaaggagaatcatctgtggctagctatagatctttctctcatcgacgagcgcgagctgctagtataattaggcttgtgttgttgcagaggggagctgagagttcatcgggttgaatcgatcgatcggcaggtttgcgggcatggcgtcgtcgaacaggcactggccgagcatgttcaggtcgaagcacgccacgcagccgtggcagacgcagcctgacatggccgggtcgccgccctccctcctctccggctcctccgccggcagcgccggcggcggcggctactccctcaagtcgtcgcccttctcgtcagtgggcgaggagagggttccggacccgaagccgcggtggaacccgcggccggagcagatccggatcctggaggcgatcttcaactccggcatggtcaacccgccgcgcgacgagatcccgcgcatccgcatgcagctgcaggagtacggccaggtcggcgacgccaacgtcttctactggttccagaaccgcaagtcccgctccaagaacaagctgcgctccggcgggacaggccgcgcggggctcggcctcggcggcaaccgggcctccgcgccggcggcggcgcaccgggaggccgtggcgccgtcgttcacgccgccgccaccaatcctcccggcgccccagccggtgcagccgcagcagcagcttgtctcgcctgtggcggcgcctacctcgtcgtcgtcttcctcctccgaccgttcgtccgggtccagcaagcctgcgagggctacgtcgacgcaggcgatgtccgtgacgacggccatggacctgctctcgccgctcgccgcggcgtgccaccagcagatgctctatcaaggccagccactggagtcgccgccggcgcctgctcccaaagtgcacggcatcgtgccacacgacgagccggtcttcctgcagtggccgcagagcccctgcctgtcggccgtcgacctcggcgccgccattcttggcggccagtacatgcacctgccggtgcccgctccgcagccaccgtcgtcgccgggcgcggcgggcatgttctgggggctctgcaacgacgtgcaagcgccaaacaacaccggccacaagagctgcgcctggagcgccgggctcggccagcactggtgcggctccgccgatcagctcggcctcggcaagagcagcgcggcgtcgatcgccaccgtgtctaggccggaggaggcgcacgacgtcgacgccacgaagcacggtctgctacagtacggctttggcatcaccacgccgcaagtgcacgtggacgttacctcctcggctgctggcgttctgcctcctgttccgtcctcgccgtcgccgccgaacgccgccgtcaccgtcgcgagcgtggccgccaccgctagcctgactgattttgctgcaagtgctatatctgctggcgccgtcgctaacaatcagtttcaaggtctcgcggatttcgggctcgtcgccggcgcctgctccggcgccggagccgccgccgccgccgccgcgcccgaggcgggcagttccgtggccgcggttgtgtgcgtcagcgtcgcgggcgccgcgccgccgctcttctacccggccgcgcacttcaacgtgaggcactacggcgacgaggccgagctgctccgctacagaggaggcagccgcacggagcctgtgcccgtcgacgagtcgggcgtcaccgtcgagccgctccagcagggcgccgtctacattgttgtcatgtaactatagattaattagttatctctccaatccgtatcattgctgtactagttaagtggcccatatatatatatatatatgtgttgccagtcttgtcgatcaattaatcaatctagcttttttttttagataataattaatcaatctagctagggttctaatatatcttgcattctactgtacgtacgtatgtgtatcgatcgatcgatccctttttatgtatgcattagcattgggagagctcgctctctgttcattgcaagggatccaccttgattgtatgctaggtgatgcagcttaaacactgcagtagatttactctacctgcagtctaccgtgcatgtcgtatgaatatgaagcttttgttggtgaa

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