LOCUS       XM_017313002            1725 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus stabilizer of axonemal microtubules 5
            (Saxo5), transcript variant X2, mRNA.
ACCESSION   XM_017313002
VERSION     XM_017313002.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000074.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017313002.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="8"
     gene            1..1725
                     /gene="Saxo5"
                     /gene_synonym="1700019B03Rik; Tex45"
                     /note="stabilizer of axonemal microtubules 5; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 3 ESTs, 2 long SRA reads, 3 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:76406"
                     /db_xref="MGI:MGI:1923656"
     CDS             198..1700
                     /gene="Saxo5"
                     /gene_synonym="1700019B03Rik; Tex45"
                     /codon_start=1
                     /product="stabilizer of axonemal microtubules 5 isoform
                     X2"
                     /protein_id="XP_017168491.1"
                     /db_xref="GeneID:76406"
                     /db_xref="MGI:MGI:1923656"
                     /translation="

MPVCPLSLEFLKASHFSLGPDPRLHDGTMQGTSHRDFPAYSAVTLVQPPSSAPQQGTIFQREARWASQKHVSEMRRAFSPPPTLQSQDELRERAIEHSQAMQISNLHLHADMRPGLNLSIARTDYGWPELPPSARLDIRSARLLFDRDSMPSGDRKQLRMPLTSYQAHYPPYDAITPQPCVPCSHLGGPNTLKWNYKGQKDTSYKKQFQALPSPPALMCKRASSSVNLGDSKVGYSPLCSLVKQTYTPQGLSPYRYDKVQAAAHIHQVNVGPGDRLFHDRTTMNDYFYSKEPEPFVLHHDKTPESNILKGNWCPGPGSLHTSSKFFYGEPPPATQPPGRQVSHEKLKDHIILGDSKLLGNFFQTSMSSDYCPPTTPIKQRTLKFSLLESNLPEGTGELDFFTTNQMMMKPHGIVRASITEDLLQKCKYSHIEPPLGRQRFFSTQNQDEYPFKYQGPLVQKLSSMHESHLPMGTPKYLGCWHEKADPRGPQIPMYPCLSQQ"

     misc_feature    369..1202
                     /gene="Saxo5"
                     /gene_synonym="1700019B03Rik; Tex45"
                     /note="Domain of unknown function (DUF4601); Region:
                     DUF4601; pfam15373"
                     /db_xref="CDD:464681"
ORIGIN      

acacctatgtgacagcattatctgggagtactcttgaggtcacaatgacctgggccagaccatcttgggttaacctctagaaaggaccagaagaccatcccctgggataaccagggccagaagggatcagagggatcagacaggagccaaggtcaagattcattaacccagtaaggtaggtagagcggggcctcacgatgcctgtgtgcccgttgtccctggagttcctcaaggcctcacacttttctttgggtcctgatccgcggctgcatgatggcactatgcagggcacatcgcacagggacttcccagcctattccgctgtcaccttggtccagcccccctcgtcagcaccacagcaaggcacaatcttccaaagggaagcgcggtgggcttcccagaagcatgtatcggagatgcgccgtgcgttctcgccaccgcccacgttacagtcgcaagatgagctacgggagcgagcaattgagcactcgcaagccatgcagataagcaatctgcacttgcacgcggatatgcgtcctggtctcaacttgtccattgcacgtactgactatggctggccagagctaccaccaagcgcccgcctggacatccgaagcgcacgcctcctctttgaccgggattcaatgccctcgggggacaggaagcagctgcgcatgccgctcacctcgtaccaggcacactatccgccctatgatgccatcacccctcagccttgtgtgccctgcagccatctagggggtcctaacaccctgaagtggaactacaagggacagaaagacacctcctacaagaagcagttccaagctctcccaagcccaccagccttgatgtgtaagagggcctcctccagtgtaaacctaggagacagcaaggttggctatagtcccctgtgttccctcgtgaagcagacctacacacctcaggggctgtccccatacaggtatgacaaggtccaggctgcagcccacatccaccaggtgaacgttggtcctggagaccgcctgttccatgacagaactaccatgaatgactacttctactccaaagagccagagccttttgttcttcaccatgataagactccggagtcaaacatcctgaaaggaaactggtgccctggccctggcagcctccatacctcctcaaagttcttctacggtgagccacctcctgcgacacagcctcctggccgacaggtgtcccatgagaaactgaaggatcacataatcttgggagactcaaagctgctcggaaacttcttccaaacctccatgagctcagactattgccctccgactacccccataaaacaaagaaccctcaagttctctttgttggagagtaacctccctgagggcacaggtgaattagactttttcaccacgaaccaaatgatgatgaagccgcatggaatagttcgagcctctatcactgaagatttgttacagaagtgcaaatacagtcacatagagcccccactgggcagacaacgtttcttctctactcagaatcaagacgagtatcccttcaagtaccagggcccattggtccagaagctaagtagcatgcatgagagccatctgccaatgggcacacccaagtaccttggctgctggcatgagaaagcagatcctcggggcccccagatccctatgtatccttgcctgagtcagcaataaatgtcacttgattgtcaaattgaca

//