2024-11-23 07:03:20, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XR_008487755 9537 bp RNA linear PRI 26-AUG-2024 DEFINITION PREDICTED: Homo sapiens succinyl-CoA:glutarate-CoA transferase (SUGCT), transcript variant X7, misc_RNA. ACCESSION XR_008487755 VERSION XR_008487755.1 DBLINK BioProject: PRJNA807723 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060931) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_009914755.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9537 /organism="Homo sapiens" /mol_type="transcribed RNA" /isolate="CHM13" /db_xref="taxon:9606" /chromosome="7" /sex="female" /cell_line="CHM13htert" /tissue_type="hydatidiform mole" /note="haploid cell line" gene 1..9537 /gene="SUGCT" /gene_synonym="C7orf10; DERP13; GA3; ORF19" /note="succinyl-CoA:glutarate-CoA transferase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 34 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:79783" /db_xref="HGNC:HGNC:16001" /db_xref="MIM:609187" misc_RNA 1..9537 /gene="SUGCT" /gene_synonym="C7orf10; DERP13; GA3; ORF19" /product="succinyl-CoA:glutarate-CoA transferase, transcript variant X7" /db_xref="GeneID:79783" /db_xref="HGNC:HGNC:16001" /db_xref="MIM:609187" ORIGIN
atctgagacgcacgcgatgctggcgacgctggcgagggtggcagctctgcgcagaacctgcctcttctccggccggggcggcgggagggggctgtggactggccgcccgcagtcagatatgaacaatataaagccattggaaggggtaaaaattctggatctaacaagagtcctggcgggaccttttgctactatgaatttaggagatcttggagcagaagttataaaagtggagagaccaggagctggtgatgatacacgaacttgggggccaccttttgttgggacagaaagtacatattatctcagtgttaaccgaaataaaaaaagtattgctgttaatatcaaggatccaaaaggggtgaaaatcatcaaagagcttgcagctgtttgtgatgtgtttgtggaaaactatgtccctggcaaactgtctgcaatgggcctgggatatgaagatatagacgagattgctcctcacatcatctattgttccatcacagggtatggtcagacaggtccaatttctcagcgagctggttatgatgctgttgcctcggctgtttctggtctgatgcacatcacagggcctgagaatggagatccagttcgcccaggagtagctatgactgatcttgccactggcctgtatgcatatggagctattatggctggattgatacaaaaatacaaaactgggaaaggactgttcattgattgtaacctgctgtcatcccaggtggcgtgtttgtctcacatagctgcaaattatcttattggtcaaaaggaagcaaaacgttggggtacagctcatggcagtatcgttccttaccaggcttttaaaaccaaggatggctatattgtagttggagcaggaaataaccagcagtttgccaccgtctgcaagatcttggatttgcctgagttgattgataattccaagtataaaactaaccaccttcgggtacacaatagaaaagagcttattaaaatattatctgaacggtttgaagaagaactgaccagcaagtggttatatctttttgaaggcagtggagtcccgtatggcccaatcaacaacatgaagaatgtatttgcagaacctcaggtccagtctgtggagtggctacataagggagacatcttgatgaagaagactttatataacaaaacaataaccataacggtattacacaatggcctcgttatggagatggagcatccaactgtggggaagatttccgtcccagatctcaggcacagtggcatccttcaccatgtggaagttgacactggcttctaccacacagtgtggttctggagagagtcaagatgaagtcctgttgatagaagaactgtgtttattctgaagctctcgctcccaccccagggaaagccgaaggaggagcttgacaagctaaaggtttccttttagacaaagtattggaagttatgaaatgtccttgttatagatgagagcaactgaccagatctgccacacacaggaatgcctcccattgctctccaggcatcagaagatgatccactgggctgcaaattatggaggaaaaatccattcatttatgaaggttttgaaatatccaacactaaagttgaagttcttgaagcctggccagtataaacaattttacataaagctctgtttacttctattcagaagcagtcaaaatgacccagttgttctgtggagcatggagctctggtgtctatcatccactggttggatttctttatggtcaggttataaagaggatcatcttagctacttcctgctataaaattttatcctcttttctcctatggaaggcaatactcaatggtccctgtagaatgtatcttattggtagcacacatcaaggctgtgtgtgtctgtgtgtgttctcaagatccccactgtcattaacagaagaggactatagatatgcttcctgttagaacacacaataaagctctttgattaaggctcacactaattgcatgtgaagtctgctacccattgaattcaggttaaaggtaaaactaataaagatgttacaggtgaacattggccttcctgaaattgcataaatgtaattgatgagaaaaaacaatgaaacaaagtaatgaatatgttattaatttcctggttcaagtttgaagtcaagaagagataaaaagttcatcagaattggtgttttatcaggtaaaactggattcatatttttttaattctaggagcaacaattcatccttggttatttctcagaattattccatattgtttggaagctcaaaaacttgagcccatctccatctgttccttcgtttagctttgaaaacctttctatgcttctagtatatgtggatcagcctgctttctcctccttcttcctaggactcttttgctgccttagtccttggctctgacaaccctttggtttagttgtcctgcctaactgaaagcatgagattaaaccaaggcaatgagaacttggtgttcccaacttaagtttgtgtggtcagttcatcagaactcaccatgctttcttcttaacagtacaggcttcttaattaggtatctgtccagctcatgaactgcaagaggtgaagacctttcccttgcatatttggaataaaaaacagcttgcctctggtgatttgggaccttggccccagtaactcagctgttctttattcctacagtctaccttcatgtgcgactttgagaatctcaagggttagagaatggagaacaacaattaaattgggactcttcgagtttcttttatttgatccttagtttgcattacatagaaattaacagcatgggccttggagtttaacaccctaaggtcagatctttactctgacccatattctgtatgaacttagaaaagtttctgatcctctctgtgtcagttttacctataggcataatatagctatttatctcacagaattgtcaggatgactgagtgacacaatacatgcaaaatgcttactacagaataaggccttgttaaatgttggctgctataattgttgtaaatagtgttaaattggccttctagaagttaagggtgggactttccaggatgtactttacctgttttaatgtatgaattttgtaacgtaaacatgcttaacttcccatgtgttttactataagtataagcagtggattgatttatccctatctcagtcccaaaacatcagtcaatcctggtctacctacttcagggcatatcccactgaactggctccccactgtgggagcaggatatgcaaccacagacagagtctccagtaaattcagtttccataagcttaaatcacagaaacactctggaggcaatgccaagtttcttccagaaagagaaatactatgatcatagctcacaaaatcaggctgaactttcacattctctcttgtatcactagtgaaaaaaaaatcttactgtcaaggaatctccaccctaggcaagatttatgttccactttcctgacatttggttcttttcctgggatcagactcattccaatatatttatgcttgaagagtccactggaaaactttccaagccagcaataggaaactgctacctggctgattctctcctcagctgctggcatagtggagaaaagacttcaggaaccttcagcagactgtctccctgtccagatttgtatcaacattaatgctttgctcatgattgaaaaacatgttcaggcttccagactcaaatatgtttcctttgctcataaccctctggtgagggaacaaatggttttggatccctggagagatgggatgtccctttatgactgagtttccctgaactcagtggggtgctgtgggctctctggatgccattatgatgaggctggagatgctccttgcttggctaaatcctcacatgttaatatttggcccgcctgttccgcagtgattgatattaagggatgagagtttttcctgaattttttcccgcatttttcaagcagaggtcacaatgacctgctgagaaggcaagaatggctatagcaatttagaagaaacatgacaatcacctcttgcttggtagaaacaggcaagggagtgatagccccaaaggaggagagagactggttattctaaagagtgcaatggagtcacaaagtatgaatgagcaggagagtagttggggatgagagatgtggagtaggacttatcgttactttacagtttgtggtttgttaatctgaactcttcttctctgccccaaagggaatctttcatctgtcatagtggttaagagcagagccttggtgtcagatgtacttgggtaagagctctgccacttagaagtatgccttggtcagcttgcctggcctctctaaaccttggtttcctcattattaaagataataattcctgttatatgcattaatgaaaaataaacatcagatcacctataatggtacctgccaaataattcaatgacactaaagagtggctagtgatagtagtggtagttggaatagtggccgaggttatggtattggtgttgaggatggtggtaacggcagtagaagcagaaaaggctgtaatacttgcaggctccagcgttttcaccgtatgattcaacggtcctccaagggcaccacagcagatgtactggcttggagagaaaccagagtttgttggcctcaccgctctactgcctcctcaaaagtatacttttcccaccacttcttccttcttttaatggagccagatttacaaatggaaaaaataaaacgggcctatatttctgacacctgcctcacctgtgatcctgagacttggcagcaaagatttcccaagggccatggcagaaactagtctataagtcttcctctttggggacccttgttccctttcctggatccccagccagacagcccaggtggtttttcatgccatcagactgacgttaaattcaacctcagttcttaaaggaaaaggtaccatttcctttcac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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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