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2025-01-30 23:04:54, GGRNA : RefSeq release 227 (Nov, 2024)

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Results:

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Danio rerio zgc:153322 (zgc:153322), mRNA. (776 bp)
id="NP_001038898.2" /db_xref="GeneID:751723" /db_xref="ZFIN:ZDB-GENE-060825-73" /translation="MDDENWETDAVMVATAPAPAELPEVKLFGRWSCEDVQVSDMSLQDYIAVKENYAKFIPHSAGRYAAKRFRKAQCPIVERVTNSLMMHGRNNGKKLMAVRIMKHAMEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR" misc_feature 119..679 /gene="zgc:153322" /note="Eukaryota homolog of Ribosomal Protein S7; Region: uS7_Eukaryote; cd14867" /db_xref="CDD:271246" misc_feature order(119..121,206..214,218..229,326..328,338..340) /gene="zgc:153322" /note="S9 interface [polypeptide binding]; other site" /db_xref...
AA_position 201
NM_001045433.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio nicotinamide riboside kinase 2 (nmrk2), transcript variant 1, mRNA. (1341 bp)
isoform 1" /protein_id="NP_001314713.1" /db_xref="GeneID:447879" /db_xref="ZFIN:ZDB-GENE-040912-44" /translation="MKFIIGIGGVTNGGKTTLTGRLIKNLPNCCVVHQDDFFKPQDQIELGEDGFRQWDVITALDMDAMVNTVKGWMENPVKFARSHGVSVSTTSDPDSDIHILIVEGFLLYNYKPLIDVYNKCFYVTIPYEECKRRRSTRTYTVPDPPGLFDGHVWPMYLKHRTEMENSSLDIQYLDGMSSKDELYNQLYEDIQNSLLNIL" misc_feature 139..630 /gene="nmrk2" /gene_synonym="itgb1bp3; zgc:103408" /note="Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+). This enzyme catalyzes the phosphorylation of nicotinamide riboside (NR) to form...
AA_position 179
Synonym: itgb1bp3; zgc:103408
NM_001327784.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio acetylserotonin O-methyltransferase (asmt), mRNA. (1268 bp)
db_xref="ZFIN:ZDB-GENE-080220-43" /translation="MAEEAELYPKKILEYMEGFLVSKTLFSACELGVFELLQSACLSAGQVSAALSTSVDGTERLLSACVGLQLLNTHTHTDRTVLYSNTEMSNVFLVKSSPKSLYHSIEYSSRTIYLCWHYLSDAVRDGKNQYEKAFGVNSKDLFEALYRSDDEMVKFMHLMNSVWNICGRDVITAFDLTPYKTICDLGGCSGALAKQCVSAYPESSVTIFDLPRVVQNSQKHFMTDQDPRIAFCEGDFFKDELPQADLYILARILHDWTDQRSVELLTKIYQSCRPGGALLLAEALLHEDDSGPLTVQLYSLNMLVQTEGRERKASEYTRLLNAAGFTHVHTHTTGKIYDAVLAIK" misc_feature 63..326 /gene="asmt" /gene_synonym="hiomt; zgc:171885" /note="dimerization domain; Region: dimerization2; pfam16864" /db_xref="CDD:465287" misc_feature 375..1004 /gene="asmt" /gene_synonym="...
AA_position 238
Synonym: hiomt; zgc:171885
NM_001114909.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio RAB3A interacting protein (rabin3) (rab3ip), mRNA. (2006 bp)
EKLKEELAKAQRELKLKDEECERLSKVRDQLGQELEELTASLFEEAHKMVHEANLKQATAEKQLKEALGKIDVLQAEVAALKTLVLSTSPTSPCKEMPPGPKAPFKKGHVRNKSTSSAMLGSQQEVAVTQPIVRECKEVDSLLFTEFKAWKEEPTLERSCSFLERIYREDIYPCLTFSKSELGSAILEAVEQNTLSVEPVGFQPLPVVRASAVECGGPKKCALCGQTKTCKHRIKFGDSSSYYYVSPFCRYRITSVCNFFTYIRYILQGLVKQQDAEQMFWEVLQLRKEMSNAKLGFYKDEL" misc_feature 753..959 /gene="rab3ip" /gene_synonym="zgc:110270" /note="GDP/GTP exchange factor Sec2p; Region: Sec2p; pfam06428" /db_xref="CDD:428938" misc_feature 1032..1610 /gene="rab3ip" /gene_synonym="zgc:110270" /note="Rab11 binding domain of Rab-3A-interacting protein (RAB3IP); Region:...
AA_position 422
Synonym: zgc:110270
NM_001020581.3 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio low density lipoprotein receptor-related protein associated protein 1 (lrpap1), mRNA. (2075 bp)
gene_synonym="wu:fi20f07; wu:fi22c06" /codon_start=1 /product="alpha-2-macroglobulin receptor-associated protein precursor" /protein_id="NP_958463.2" /db_xref="GeneID:333939" /db_xref="ZFIN:ZDB-GENE-030131-5871" /translation="MQLLILVSLFAVGAMAGKYSKEMNEKNASDKSNSQVEFRIAKLNQVWEKAIRMQLAPVRLSELHSDLKIQEKDELQWKKLKAEGMDEDGEREAKLRRNFNIILAKYGMDGKKDTRTLDSNRLKDHEVKVGDTFDDPKLDKLWNKARTSGKFSDEELQTLHREFQHHKDKIHEYNIVMDTVSRTEEIHKNVISPLEGDVKENVLHQKHTDLKQRMRDLNQGFERLRKITHEGYTDDSEFREPRVIELWEMAKRSNLSKDELDSLKEELRHFETKVEKHQHYQEQLELSHQKLKHVEALGDEDHIMRNKEKYNTLAEKAREMGYKMKKHLQDLTNKLSKNGLQHNEL" sig_peptide 116..163 /gene...
AA_position 72
Synonym: wu:fi20f07; wu:fi22c06
NM_201306.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio major facilitator superfamily domain containing 4Ab (mfsd4ab), mRNA. (1988 bp)
db_xref="ZFIN:ZDB-GENE-060810-38" /translation="MLIEERLLTLFKRNCQHTLTYWSVFFSFGLSIAFLGPTILDLKCRTGSTLQEITWVFFAQQLCLLIGSSSGGAFTKTLFSALLALFLSSLIISVVFSIIPLCYNVLLLAIAMAVSGLAMGIIDTIANIQLVSIYKKDSPIFLQALHFFIGLGALLSPLIAEPFISGHCLRSNSTENATEIIHHFRSSFRSPVNLPESSPLSGPVEERNVSYAFWIMALINLPVPIAVFVLMYQEKLLPFCPNSSPRLLDKDELAMETKAPDNTEMAELDDEVFLHSGHGNIFSCCTDGALRGLPVTFFLIHIFGGMVLFMTEGIMGVYAGFVYTYAVSPPMSLQSKMAGNLNCIFWAAITAGRLVSIPLSYRFKTVHLLLTNMAGVIVTLLLLMILYTNRVFLFVGTTFLGLFISSVFPCLVAYTEDILEYRGCATTVLVTLSGMGEMTLQVLAGTLIQKKGSYSFLVCGLVIGCLGFIFLLSVILSNHFHRKITGASKKAEITDGPAAPAPEKTAPEHKTAVIQPECIKCDFGLDHNGSKPAENT" misc_feature...
AA_position 250
Synonym: im:7150270; mfsd4b2; zgc:175151
NM_001114416.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio nicotinamide riboside kinase 2 (nmrk2), transcript variant 2, mRNA. (1277 bp)
codon_start=1 /product="nicotinamide riboside kinase 2 isoform 2" /protein_id="NP_001004618.2" /db_xref="GeneID:447879" /db_xref="ZFIN:ZDB-GENE-040912-44" /translation="MDAMVNTVKGWMENPVKFARSHGVSVSTTSDPDSDIHILIVEGFLLYNYKPLIDVYNKCFYVTIPYEECKRRRSTRTYTVPDPPGLFDGHVWPMYLKHRTEMENSSLDIQYLDGMSSKDELYNQLYEDIQNSLLNIL" misc_feature <264..581 /gene="nmrk2" /gene_synonym="itgb1bp3; zgc:103408" /note="Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate...
AA_position 118
Synonym: itgb1bp3; zgc:103408
NM_001004618.2 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio zmp:0000000924 (zmp:0000000924), transcript variant X2, mRNA. (1383 bp)
codon_start=1 /product="macrophage mannose receptor 1-like isoform X2" /protein_id="XP_068074683.1" /db_xref="GeneID:101884643" /db_xref="ZFIN:ZDB-GENE-130530-927" /translation="MRAEMSEDIYNNVIKTESERMNRERVEMAVVIYESTDCVRDYDFRTESNTQQPIQNTGSDSVKTRFSRAAPVCLVLLCFLLLTAVIVLSVFIYTNNTNYTEERRQLITNITNLTGAKDELTNLLYDKDQLIKWLQIFGQEAGWFYYQSSFYYFSNETKSWTESRRYCRDKRADLIIINNKQEQDFIMKITCNNEFWIGLTDIKKEGTWKWVDGSILTSGFWASSGSINEPNGGKTENCAVTHLKKHPELIGWLDVTCDDAHQWIFIVLSVFIYTNNKNCAKDRRQLVTNISNLTGAKDELTNLLMERDQLIKQLQIFGQEAVWFYYQSSFYYLSNETKSWTESRRCCKDRGADLIIVNNKQEQDFIMKITGNNEFWIGLTDSDEEGNWKWVDGSILTSGFWASSGSITEPNGRETENCAVTH...
AA_position 117
XM_068218582.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio ring finger protein 24 (rnf24), mRNA. (1603 bp)
CDS 332..781 /gene="rnf24" /gene_synonym="zgc:103462" /codon_start=1 /product="RING finger protein 24" /protein_id="NP_001007353.1" /db_xref="GeneID:492480" /db_xref="ZFIN:ZDB-GENE-041114-40" /translation="MTSDLQHYSFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKELYAYKQVIQKEKVKELNLHEICAVCLEEFKQKDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQQQSMSEPIAPTQQHLPGVENLV" misc_feature 557..718 /gene="rnf24" /gene_synonym="zgc:103462" /note="RING finger, H2 subclass, found in RING finger protein 24 (RNF24) and similar proteins; Region: RING-H2_RNF24; cd16675" /db_xref="CDD:438337" exon 475..517 /gene="rnf24" /...
AA_position 88
Synonym: zgc:103462
NM_001007352.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio ring finger protein 122 (rnf122), transcript variant X1, mRNA. (719 bp)
si:ch1073-392o20.1" /codon_start=1 /product="RING finger protein 122 isoform X1" /protein_id="XP_005172552.1" /db_xref="GeneID:100329730" /db_xref="ZFIN:ZDB-GENE-091204-454" /translation="MHPFQWCNGCFCGLGLIYSNKTCTMPSVTFQDLPLNIYMVIFGTGIFVFVLSLIFCCYFISKLRHQAQSERFGYREVVLKGDPKKLNLHGTCAVCLEDFKVKDELGVLPCQHAFHRRCVVKWLEVRCVCPMCNKPLSGSSEQHQSLGTLLDELV" misc_feature 397..534 /gene="rnf122" /gene_synonym="si:ch1073-392o20.1" /note="RING finger (Really Interesting New Gene) domain and U-box domain superfamily; Region: RING_Ubox; cl17238" /db_xref="CDD:473075" misc_feature order...
AA_position 102
Synonym: si:ch1073-392o20.1
XM_005172495.5 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio ring finger protein 122 (rnf122), mRNA. (1585 bp)
gene_synonym="si:ch1073-392o20.1" /codon_start=1 /product="RING finger protein 122" /protein_id="NP_001314745.1" /db_xref="GeneID:100329730" /db_xref="ZFIN:ZDB-GENE-091204-454" /translation="MHPFQWCNGCFCGLGLIYSNKTCTMPSVTFQDLPLNIYMVIFGTGIFVFVLSLIFCCYFISKLRHQAQSERFGYREVVLKGDPKKLNLHGQTCAVCLEDFKVKDELGVLPCQHAFHRRCVVKWLEVRCVCPMCNKPLSGSSEQHQSLGTLLDELV" misc_feature 608..748 /gene="rnf122" /gene_synonym="si:ch1073-392o20.1" /note="RING finger (Really Interesting New Gene) domain and U-box domain superfamily; Region: RING_Ubox; cl17238" /db_xref="CDD:473075" misc_feature order...
AA_position 103
Synonym: si:ch1073-392o20.1
NM_001327816.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio trafficking protein particle complex subunit 6B (trappc6b), mRNA. (954 bp)
complex subunit 6B; trafficking protein particle complex 6b" /codon_start=1 /product="trafficking protein particle complex subunit 6b" /protein_id="NP_001006029.1" /db_xref="GeneID:450008" /db_xref="ZFIN:ZDB-GENE-041010-122" /translation="MADEALFQFLHSEIIQYVNSAETGESENGRCVSKLENMGFRVGQGLIERFTQDTPRFKDELDVMKFICKDFWTSVFKKQIDNLRTNHQGIYVLQDNKFRLLTQLSAGKQYLEHAPKFLAFTCGLVRGALSNIGVKSIVTAEVSVMPACKFQVMIQKM" misc_feature 211..669 /gene="trappc6b" /gene_synonym="zgc:103464" /note="Trs33 subunit of the TRAPP complex; Region: TRAPPC6A_Trs33; cd14944" /db_xref="CDD:271347" misc_feature order...
AA_position 58
Synonym: zgc:103464
NM_001006029.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio ring finger protein 24 (rnf24), transcript variant X1, mRNA. (1786 bp)
rnf24" /gene_synonym="zgc:103462" /codon_start=1 /product="RING finger protein 24 isoform X1" /protein_id="XP_005160122.1" /db_xref="GeneID:492480" /db_xref="ZFIN:ZDB-GENE-041114-40" /translation="MIYLPVLSMTSDLQHYSFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCCYLIRLRHQAHKELYAYKQVIQKEKVKELNLHEICAVCLEEFKQKDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQQQSMSEPIAPTQQHLPGVENLV" misc_feature 627..788 /gene="rnf24" /gene_synonym="zgc:103462" /note="RING finger, H2 subclass, found in RING finger protein 24 (RNF24) and similar proteins; Region: RING-H2_RNF24; cd16675" /db_xref="CDD:438337" polyA_site 1786 /gene="rnf24" /...
AA_position 96
Synonym: zgc:103462
XM_005160065.5 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio guanylate cyclase activator 1Ab.1 (guca1ab.1), transcript variant X1, mRNA. (4611 bp)
gcap5; guca1e; zgc:66243" /codon_start=1 /product="guanylate cyclase activator 1Ab.1 isoform X1" /protein_id="XP_068072364.1" /db_xref="GeneID:393629" /db_xref="ZFIN:ZDB-GENE-040426-1577" /translation="MYSPYIKSALFVHGQVSESNTRAQDTGSSKHAGNWTISVVLEVGGRLDGCIDFMEYVAALSLVLKGGVQQKLRWYFKLFDMDGSGCIDKDELLLIFKAVQAINGAEPEISAEDLADMVFNKIDVNGDGELSLEEFMEGISADEKISEMLTQSLDLTRIVSNIYNDSYIEQEAEIIEDQA" polyA_site 4611 /gene="guca1ab.1" /gene_synonym="gcap5; guca1e; zgc:66243" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN //...
AA_position 89
Synonym: gcap5; guca1e; zgc:66243
XM_068216263.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio guanylate cyclase activator 1d (guca1d), mRNA. (558 bp)
gcap4; si:rp71-1p14.1" /codon_start=1 /product="guanylate cyclase activator 1d" /protein_id="NP_001011661.1" /db_xref="GeneID:494573" /db_xref="ZFIN:ZDB-GENE-040724-231" /translation="MGNNHASLDDILAEDMHHWYNKFMRESPSGLITLFELKSILGLQGMNEDANSYVDQVFCTFDMDRDGYIDFVEYIAAISLMLKGEINQKLKWYFKLFDQDGNGKIDKDELETIFTAIQDITRNRDIVPEEIVALIFEKIDVNGEGELTLEEFIEGAKEHPEIMDMLKILMDLTPVLLIIVEGRQK" misc_feature 82..228 /gene="guca1d" /gene_synonym="gcap4; si:rp71-1p14.1" /note="EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have...
AA_position 107
Synonym: gcap4; si:rp71-1p14.1
NM_001011661.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio gonadal somatic cell derived factor (gsdf), transcript variant X1, mRNA. (1005 bp)
db_xref="GeneID:571289" /db_xref="ZFIN:ZDB-GENE-101029-3" CDS 140..703 /gene="gsdf" /codon_start=1 /product="gonadal somatic cell derived factor isoform X1" /protein_id="XP_003200841.1" /db_xref="GeneID:571289" /db_xref="ZFIN:ZDB-GENE-101029-3" /translation="MVCVCLPCVRWAPLLALLVCVFAQDSSRECLDKDELIAEMPSTVDLPTECVLTCTALTYRQILDTQRRVTVRFRDSRPGEDRDEFCWLISSRCSTWDEVLVLLSLSQSDAATEARIRLQTDSLILVEPQDSPSVLPDDCGLRFDVTAQLQGLRQHTLCVRPHGIMGNQLQCPPALVFVKQKQKESRS" polyA_site 1005 /gene="gsdf" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN //...
AA_position 33
XM_003200793.6 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio ribosomal protein L9 (rpl9), transcript variant X2, mRNA. (783 bp)
large ribosomal subunit protein uL6 isoform X2" /protein_id="XP_005170964.1" /db_xref="GeneID:336702" /db_xref="ZFIN:ZDB-GENE-030131-8646" /translation="MKTILSNQTVDIPDNVTVSLKGRTVTVKGPRGVLRREFNHINLELSLLGKKQKKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQESGSLVEIRNFLGEKYIRRVRMRQGVACAVSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVEAES" misc_feature 34..606 /gene="rpl9" /gene_synonym="ab02c03; fa93a01; mg:ab02c03; wu:fa93a01; zgc:103730" /note="60S ribosomal protein L6; Provisional; Region: PTZ00027" /db_xref="CDD:240234" polyA_site 783 /gene="rpl9" /gene_synonym="ab02c03; fa93a01; mg:...
AA_position 141
Synonym: ab02c03; fa93a01; mg:ab02c03; wu:fa93a01; zgc:103730
XM_005170907.5 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio ribosomal protein L9 (rpl9), mRNA. (644 bp)
product="large ribosomal subunit protein uL6" /protein_id="NP_001003861.1" /db_xref="GeneID:336702" /db_xref="ZFIN:ZDB-GENE-030131-8646" /translation="MKTILSNQTVDIPDNVTVSLKGRTVTVKGPRGVLRREFNHINLELSLLGKKQKKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQESGSLVEIRNFLGEKYIRRVRMRQGVACAVSAAQKDELVLEGNDIELVSNSAALIQQATTVRKKDIRKFLDGIYVSEKGTVVEQQED" misc_feature 1..567 /gene="rpl9" /gene_synonym="ab02c03; fa93a01; mg:ab02c03; wu:fa93a01; zgc:103730" /note="60S ribosomal protein L6; Provisional; Region: PTZ00027" /db_xref="CDD:240234" exon 1..46 /gene="rpl9" /gene_synonym="ab02c03; fa93a01; mg:...
AA_position 141
Synonym: ab02c03; fa93a01; mg:ab02c03; wu:fa93a01; zgc:103730
NM_001003861.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio ribosomal protein L9 (rpl9), transcript variant X1, mRNA. (665 bp)
large ribosomal subunit protein uL6 isoform X1" /protein_id="XP_005170963.1" /db_xref="GeneID:336702" /db_xref="ZFIN:ZDB-GENE-030131-8646" /translation="MKTILSNQTVDIPDNVTVSLKGRTVTVKGPRGVLRREFNHINLELSLLGKKQKKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQESGSLVEIRNFLGEKYIRRVRMRQGVACAVSAAQKDELVLEGNDIELVSNSAALIQQATTVRKKDIRKFLDGIYVSEKGTVVEQQED" misc_feature 34..600 /gene="rpl9" /gene_synonym="ab02c03; fa93a01; mg:ab02c03; wu:fa93a01; zgc:103730" /note="60S ribosomal protein L6; Provisional; Region: PTZ00027" /db_xref="CDD:240234" polyA_site 665 /gene="rpl9" /gene_synonym="ab02c03; fa93a01; mg...
AA_position 141
Synonym: ab02c03; fa93a01; mg:ab02c03; wu:fa93a01; zgc:103730
XM_005170906.5 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio guanylate cyclase activator 1Ab.1 (guca1ab.1), mRNA. (2915 bp)
cyclase activator 1e" /codon_start=1 /product="guanylate cyclase activator 1Ab.1" /protein_id="NP_956950.1" /db_xref="GeneID:393629" /db_xref="ZFIN:ZDB-GENE-040426-1577" /translation="MGDSSSMSATELSACKCHQWYRKFMTECPSGQLTFYEFKKFFGLKNLSEKSNAYVNTMFKTFDIDDDGCIDFMEYVAALSLVLKGGVQQKLRWYFKLFDMDGSGCIDKDELLLIFKAVQAINGAEPEISAEDLADMVFNKIDVNGDGELSLEEFMEGISADEKISEMLTQSLDLTRIVSNIYNDSYIEQEAEIIEDQA" misc_feature 113..499 /gene="guca1ab.1" /gene_synonym="gcap5; guca1e; zgc:66243" /note="Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]; Region: FRQ1; COG5126" /db_xref="CDD:444056" exon...
AA_position 108
Synonym: gcap5; guca1e; zgc:66243
NM_200656.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio saxiphilin (sxph), mRNA. (2414 bp)
db_xref="ZFIN:ZDB-GENE-080204-110" /translation="MMKLVSVIVVLLLLLCSITSWGKKMRWCAVSEAEQKKCAELAKALVAVLPPAAVTAFARLSCVKAYSTADCINKIRDNKADLVTLDAGEVYSAVKQFGLTVVAKEIYRDGGCILAVAVVRNSSSLDMRSLQGSRSCHSGARWTAGWSLPLGHLLSRNLLPWAEDEPISQAVSAFFNASCVPGATTMAANLCSLCKGQRSYIRQKNFHCETSHSEPFYHNQGALRCLQSGAGDIAFVDHTALDGIDEREKDELRLLCTDGSLAPLSSFRTCNLGRGPGGGVVTRMNIRKIARKFLVAAQMSFGWRGRERRRFQLFESASFGGSDLLFRDVTEKLSVLMEDMDMSQVLGLDYVALLKGLGHEGSSLEDSVVRWCCISHAEQKKCEQWAISIKSDPLVCVKASSMSDCIEKIKRDEVDAVSLDATHAFIAGKCGLVPVVTEYYGEKCETSAGAGGHFESNELPPVYGVAVVRRSSKSLFFGSLADRRSCHSHMYSPAGWVLPVRHTLSTEHNNSAPCEPNKVYSEVFWKGCLPGGQGNLCKVCMGGTEEAATKR...
AA_position 249
Synonym: zgc:172271
NM_001114466.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio HOATZ cilia and flagella associated protein (hoatz), transcript variant X1, mRNA. (718 bp)
HOATZ isoform X1" /protein_id="XP_009300135.1" /db_xref="GeneID:566423" /db_xref="ZFIN:ZDB-GENE-070705-453" /translation="MSEELDEEVLDGLTEVEKLYTVFHGASQEDVAYAKLFWNSLSLQPPIESRLVSSDIRQRLKVAKTPNTTNAAANQAPWSKRNEEIQQDAYLRQKQEEKQRYMEMAKNRDQIIALLKKQRDERIKAMTLLLESLVSVVLLESDQLWYYTKTRYILYSILCLLCCVLSFIVLLKDELTLHFCIHRSLNLDYSTSFCCWKTLLL" misc_feature 68..>436 /gene="hoatz" /gene_synonym="si:dkey-27p23.3" /note="Cilia- and flagella-associated protein HOATZ-like; Region: HOATZ-like; pfam17664" /db_xref="CDD:465445" ORIGIN //...
AA_position 172
Synonym: si:dkey-27p23.3
XM_009301860.4 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio ribosomal protein S5 (rps5), mRNA. (702 bp)
uS7" /protein_id="NP_775339.1" /db_xref="GeneID:192297" /db_xref="ZFIN:ZDB-GENE-020419-12" /translation="MAEDWEAAPAVAETPEIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSSGRYAAKRFRKAQCPIVERVTNSMMMHGRNNGKKLLTVRIVKHAFEIIHLLTGENPLQILVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSYNSYAIKKKDELERVAKSNR" misc_feature 85..645 /gene="rps5" /gene_synonym="chunp6933; fc74e05; fj57h03; wu:fc74e05; wu:fj57h03" /note="Eukaryota homolog of Ribosomal Protein S7; Region: uS7_Eukaryote; cd14867" /db_xref="CDD:271246" misc_feature order(85..87,172..180,184..195,292..294,304..306) /gene="rps5" /gene_...
AA_position 193
Synonym: chunp6933; fc74e05; fj57h03; wu:fc74e05; wu:fj57h03
NM_173232.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio protein shisa-5-like (LOC137488908), transcript variant X3, mRNA. (806 bp)
with support for all annotated introns" /db_xref="GeneID:137488908" CDS 70..708 /gene="LOC137488908" /codon_start=1 /product="protein shisa-5-like isoform X3" /protein_id="XP_068072536.1" /db_xref="GeneID:137488908" /translation="MVYAVMFLLCLSAVIFKVTLALEDCTSYNASRGDLVLCSRRSFFCCGTCDKMYCCNNRKEKITKDELNDCLSNNTLPSHSPHQLDRTVFIEPIVMFLVFIVIVFIIICCSEKRIRNRLTTTQHNPQEGLYSAYQPVFNNPQSPTMPMGQLYAPGPPPSYHEAAGCPCPISQSAYDSGQVLYSIQPTEAQPPLSIDYNPPAYNPAYVNSLKTS" ORIGIN //...
AA_position 64
XM_068216435.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio protein shisa-5-like (LOC137488908), transcript variant X2, mRNA. (821 bp)
with support for all annotated introns" /db_xref="GeneID:137488908" CDS 70..723 /gene="LOC137488908" /codon_start=1 /product="protein shisa-5-like isoform X2" /protein_id="XP_068072535.1" /db_xref="GeneID:137488908" /translation="MVYAVMFLLCLSAVIFKVTLALEDCTSYNASRGDLVLCSRRSFFCCGTCDKMYCCNNRKEKITKDELNDCLSNNTLPSHSPHQLDRTVFIEPIVMFLVFIVIVFIIICCSEKRIRNRLMSTTTVTTTQHNPQEGLYSAYQPVFNNPQSPTMPMGQLYAPGPPPSYHEAGCPCPISQSAYDSGQVLYSIQPTEAQPPLSIDYNPPAYNPAYVNSLKTS" ORIGIN //...
AA_position 64
XM_068216434.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio rhophilin associated tail protein 1-like (ropn1l), mRNA. (992 bp)
AKAP-associated sperm protein; ropporin 1-like" /codon_start=1 /product="ropporin-1-like protein" /protein_id="NP_001004624.1" /db_xref="GeneID:798354" /db_xref="ZFIN:ZDB-GENE-040724-235" /translation="MPLSETMYCAQQINIPPALPNMLKQFTKAAIRTQPRDVLQWAADYFSALSKGQDLPVKKRLELPVATQKTDTGLTPGLLKILHQQLTSKETVTKDELLPKWKALHLPVEQLDTILALGNFSENINWMQFFALACSALGGSITSALKHACEILTEDPEGGPAQIPFHMFRSLYTYLAHLDGEIPEEQIDSFLHSLEGQAQSQGGMVQPSNFTSLHTAEK" misc_feature 221..349 /gene="ropn1l" /gene_synonym="asp; bZ1F1.7; si:rp71-1f1.7; zgc:101773" /note="dimerization/docking (D/D) domain found in ropporins; Region: DD_ROP;...
AA_position 94
Synonym: asp; bZ1F1.7; si:rp71-1f1.7; zgc:101773
NM_001004624.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio protein shisa-5-like (LOC137488908), transcript variant X1, mRNA. (824 bp)
with support for all annotated introns" /db_xref="GeneID:137488908" CDS 70..726 /gene="LOC137488908" /codon_start=1 /product="protein shisa-5-like isoform X1" /protein_id="XP_068072534.1" /db_xref="GeneID:137488908" /translation="MVYAVMFLLCLSAVIFKVTLALEDCTSYNASRGDLVLCSRRSFFCCGTCDKMYCCNNRKEKITKDELNDCLSNNTLPSHSPHQLDRTVFIEPIVMFLVFIVIVFIIICCSEKRIRNRLMSTTTVTTTQHNPQEGLYSAYQPVFNNPQSPTMPMGQLYAPGPPPSYHEAAGCPCPISQSAYDSGQVLYSIQPTEAQPPLSIDYNPPAYNPAYVNSLKTS" ORIGIN //...
AA_position 64
XM_068216433.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio phospholipase A2, group XIIB (pla2g12b), mRNA. (1748 bp)
GeneID:406739" /db_xref="ZFIN:ZDB-GENE-040426-2771" /translation="MFPRALPLLLLCISAGLAATLIQASVDAASVDSPAGESPDVNQENQAEHVLMADAPVEGKPAPSATEESEDDDDWGFGSIRGSLQSVNGYFDSILELMGGRDGVCQFRCRYGKAPQPRPGYQMSEPDGCSTSLLGFQFDMGVPAMTKCCNQLDICYETCGSNKYRCDTKFRWCLHSICGDLKKSLGLMSKVEACETFADTMYNTVWTLGCRPFMNGQRASCYCEGEEKDEL" sig_peptide 62..145 /gene="pla2g12b" /gene_synonym="wu:fb26d02; wu:fb99g06; wu:fc91d12; zgc:111897; zgc:56487; zgc:77746" /inference="COORDINATES: ab initio prediction:SignalP:6.0" misc_feature 239..754 /gene="pla2g12b" /gene_synonym="wu:fb26d02; wu:fb99g06; wu:fc91d12; zgc:111897; zgc:56487; zgc...
AA_position 228
Synonym: wu:fb26d02; wu:fb99g06; wu:fc91d12; zgc:111897; zgc:56487; zgc:77746
NM_213430.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio BCL2 interacting protein 1b (bnip1b), mRNA. (1899 bp)
gene="bnip1b" /codon_start=1 /product="vesicle transport protein SEC20" /protein_id="XP_001333725.2" /db_xref="GeneID:795732" /db_xref="ZFIN:ZDB-GENE-120203-6" /translation="MTTNMASSSDVHVRICGQEIIKYDLEIKAIIQDIRECCGPQAVLMELNSTVKEKFSLLRQRIQDMEQMAKEQDRETDKQALLSETEGHRKQMLSNQMAWRKANLACKLAIDNLEKDELLQGGDAVRQRKATKESLVQTSSDITESLMSISRMMSQQVQQSDETIGTLVTSSRTVQETNEEFKAMTGTIHLGRKLILKYNRRELTDKLLIFLAIALFLATVLYILKKRLFPFI" misc_feature 406..684 /gene="bnip1b" /note="SNARE motif of SEC20; Region: SNARE_SEC20; cd15865" /db_xref="CDD:277218" misc_feature order...
AA_position 115
XM_001333689.9 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio phospholipase A2, group XIIB (pla2g12b), transcript variant X1, mRNA. (1799 bp)
GeneID:406739" /db_xref="ZFIN:ZDB-GENE-040426-2771" /translation="MFPRALPLLLLCISAGLAATLIQASVDAASVDSPADESPDVNQENQAEHVLMADAPVEGKPAPSATEESEDDDDWGFGSIRGSLQSVNGYFDSILELMGGRDGVCQYRCRYGKAPQPRPGYQMSEPDGCSTSLLGFQVPNSFDMGVPAMTKCCNQLDICYETCGSNKYRCDTKFRWCLHSICGDLKKSLGLMSKVEACETFADTMYNTVWTLGCRPFMNGQRASCYCEGEEKDEL" misc_feature 242..769 /gene="pla2g12b" /gene_synonym="wu:fb26d02; wu:fb99g06; wu:fc91d12; zgc:111897; zgc:56487; zgc:77746" /note="Group XII secretory phospholipase A2 precursor (PLA2G12); Region: PLA2G12; pfam06951" /db_xref="CDD:399731" polyA_site 1799 /gene="pla2g12b" /gene_synonym="wu:...
AA_position 232
Synonym: wu:fb26d02; wu:fb99g06; wu:fc91d12; zgc:111897; zgc:56487; zgc:77746
XM_005156519.5 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio epidermal growth factor receptor pathway substrate 8b (eps8b), mRNA. (861 bp)
protein_id="XP_068075006.1" /db_xref="GeneID:564779" /db_xref="ZFIN:ZDB-GENE-060503-164" /translation="MLEPSNSDLQHVRIRYHFVARNANELTVQQGDELEVLENNQQWWLLRNRSGQSGYVPCNVLEEVKPGEQQYNRAALFSSQAVNPYKGTTTSPVPVNHAVVLETNKSSRDKDNRDQQKEVNDELLKRITDNKAQPPARNFRVERSSRSIPITDESQPFEVHAWLNAKGFSRPVVECLGILNGAQLFSLSKDELKAVCGDEGSRVYSQITVQKAQIERGNGDTELQEIMRRRQQEVDSTWD" ORIGIN //...
AA_position 189
XM_068218905.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio wingless-type MMTV integration site family, member 16 (wnt16), transcript variant X1, mRNA. (1781 bp)
product="protein Wnt-16 isoform X1" /protein_id="XP_005164724.1" /db_xref="GeneID:791563" /db_xref="ZFIN:ZDB-GENE-040426-2330" /translation="MAAGLVHAVTRSCSAGNMTECSCDTSLLGSGSPTEGWHWGGCSDDIAFGTSFSRRFIDSAAKNTSTRGEEALLIMKQHNSEAGRQAVAKTMLTDCRCHGVSGSCAVKTCWRTMAAFERVGAYLKDRYETSVHVVDRSKRKVRRKDKEQRHVPITKDELIFFNKSPNYCLEDRRLGVTGTRGRKCNRTSAGPDGCNLLCCGRGYNTHVVRHVERCECKFVWCCYVRCRRCETMNDMHTCK" misc_feature <587..1303 /gene="wnt16" /gene_synonym="zgc:77293" /note="Wnt domain found in the WNT signaling gene family, also called Wingless-type mouse mammary tumor virus (MMTV) integration site family; Region: Wnt...
AA_position 155
Synonym: zgc:77293
XM_005164667.5 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio epidermal growth factor receptor pathway substrate 8b (eps8b), mRNA. (857 bp)
protein_id="XP_021323458.1" /db_xref="GeneID:564779" /db_xref="ZFIN:ZDB-GENE-060503-164" /translation="MLEPSNSDLQHVRIRYHFVARNANELTVQQGDELEVLENNQQWWLLRNRSGQSGYVPCNVLEEVKPEEQQYNRAALFSSQAVNPYKGTTTSPVPVNHAVVLEMNKSSRDKDNRDQQKEVNDELLKRITDNKAQPPARNFRVERSSRSIRITDESQPFEVHAWLNAKGFSRPVVECLGILNGAQLFSLSKDELKAVCGDEGSRVYSQITVQKAQIERGNGDTELQEIMRRRQQEVDSTWD" misc_feature 91..249 /gene="eps8b" /note="Src Homology 3 domain superfamily; Region: SH3; cl17036" /db_xref="CDD:473055" misc_feature order(103..105,109..111,118..120,130..132,181..186, 226..228,232..237) /gene="eps8b" /note="peptide ligand binding site...
AA_position 189
XM_021467783.2 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio si:dkey-27h10.2 (si:dkey-27h10.2), transcript variant X3, mRNA. (919 bp)
isoform X3" /protein_id="XP_021332423.1" /db_xref="GeneID:100150349" /db_xref="ZFIN:ZDB-GENE-090313-296" /translation="MCYASLHLFLADSPNPSPISEEPQTTSTTDNPLNKVPQVSTNATIQTTTRTRTSITTCKAPEPKKHGPAYIIILVIAVLCITGVVVYCCLQKNSRKYSVDLHPKKEDAQIPLSTVDAEVFDTTSEKDLQTFAPVEPVKDPDIGKEAEKPEEGKEIPDVKQENQQNFSTPEATVIPNDKKDELTVVDLTDAEPAISTKTSMESLDDTLNENNSNNTRIEGIANGYEFIEIFLDGPL" ORIGIN //...
AA_position 184
XM_021476748.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio B cell receptor associated protein 31 (bcap31), mRNA. (1138 bp)
protein_id="NP_956386.1" /db_xref="GeneID:368488" /db_xref="ZFIN:ZDB-GENE-030616-63" /translation="MSLQWTAVATFLYAEVLAVLLLCVPFISPKRWSKFFKSRLVTAITSYGNTAFIVIICILVFLLIDAFREVRKYSVAEKVDLSNNPVAIEHIHMKLFRAQRNEYIAGFALLLCLLLRRLATLLSQQATLMASHEAFQKQAEGANDAAKKYMEENEKLQEKLRQAGIEVPEVGGKAKGGMEEDKKNLKEEVRQLKDELDATKKALQKSDSDVKAMKKQAENLTTEYDRLLEEHARLQAKCDAQQDKKSD" misc_feature 106..>426 /gene="bcap31" /gene_synonym="si:bz30i22.4; si:rp71-30i22.4; zgc:56389" /note="Bap31/Bap29 transmembrane region; Region: Bap31; pfam05529" /db_xref="CDD:461673" misc_feature 837 /gene="bcap31" /gene_synonym="si:bz30i22.4; si:...
AA_position 193
Synonym: si:bz30i22.4; si:rp71-30i22.4; zgc:56389
NM_200092.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio solute carrier family 15 member 2 (slc15a2), mRNA. (3238 bp)
LMDSDVTVQFPAHNVFSEPLKPYEEPSGYSSLPLTGESQLQNVVVSHNGVNYECRLTFTERMAYSLLLHPPAQSGGSVCNLVKDHITKSETGAAYIRFINTHTENINVTVGTEEVHASANYGISRNISVPRGEYNKAVCVTDSKEYEINLGLLDFGAFYTVILSETGNNLAIKKMEDIQANNIHIGWQIPQYVFLTAGEVMFSITGLEFSYSQAPASMKSVLQAGWLMTVAFGNVIVLIVAEGAGMEQWVEFLLFAALLVAVSIIFSIMAYFYTYVDPDQLDKLFKEEGDGGKVESSKKDELSLGEIPKQTKM" misc_feature 218..2125 /gene="slc15a2" /gene_synonym="wu:fc84g07; wu:fi22a10; zgc:152684" /note="Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); Region: 2A1704; TIGR00926" /db_xref="CDD:273343" misc_feature...
AA_position 705
Synonym: wu:fc84g07; wu:fi22a10; zgc:152684
NM_001039828.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio carbonic anhydrase VIII (ca8), transcript variant X1, mRNA. (2080 bp)
" /note="transcription start site" CDS 296..1045 /gene="ca8" /gene_synonym="zgc:110118" /codon_start=1 /product="carbonic anhydrase-related protein isoform X1" /protein_id="XP_068080124.1" /db_xref="GeneID:550233" /db_xref="ZFIN:ZDB-GENE-050417-26" /translation="MADNVIEESGNYPGKDELDWGYEEGVEWGLLFPEANGEYQSPINLNSREARYDPQLLDVGLNPNYVVCRDCEVINDGHTVRIMLKSKSVVTGGPLPSDHEYELSEVRFHWGKENQRGSEHTVNFKAFPMEVGKEHLGLKAITDVLQDLQYKGKTKIIPCFNPNTLLPDPLLRDYWVYEGSLTTPPCSENVTWILYRYPLTISQMQIEEFRRLRSHVKGAELPEGNDGMLGDNFRPTQPLSDRVVRAAFQ" polyA_site 2080 /gene="ca8" /gene_synonym="zgc:110118" /experiment="...
AA_position 15
Synonym: zgc:110118
XM_068224023.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio zmp:0000001048 (zmp:0000001048), transcript variant X3, mRNA. (1975 bp)
annotated introns" /db_xref="GeneID:556557" /db_xref="ZFIN:ZDB-GENE-140106-8" CDS 160..930 /gene="zmp:1048" /codon_start=1 /product="retinol dehydrogenase 8 isoform X2" /protein_id="XP_009298065.1" /db_xref="GeneID:556557" /db_xref="ZFIN:ZDB-GENE-140106-8" /translation="MGTRKVLVTGCSSGIGLAVAVRLAKDELRRFKVNNAGVGMIGPLECQSMSSMQDLFNTNFFGLVRLVKELLPQMKKRQSGHIIVMSSVLGIQGLLFNDLYAASKFAVEGFCESLAVQAMKFNVKMTLVEPGPVVTEFERKVYEEAETMDLSETDEETAQIFRQIYLPYSRRVFHSIGQTPEEVAEQTTRLILSKNPPFRHQTNRLYMPLTAMKHADPTGRLPIDAFYKMIFQHDRIFSASLNIMRILNRKIGKSAA" misc_feature 169..777 /gene="zmp:1048" /note="A large family of...
AA_position 25
XM_009299790.4 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio integral membrane protein 2Cb (itm2cb), mRNA. (1823 bp)
gene="itm2cb" /gene_synonym="fj35c02; itm2c; wu:fj35c02; zgc:66349" /note="integral membrane protein 2C" /codon_start=1 /product="integral membrane protein 2Cb" /protein_id="NP_956274.1" /db_xref="GeneID:335863" /db_xref="ZFIN:ZDB-GENE-030131-7806" /translation="MVKISFQQVTVQKPEKENDGDKEEIQMPYSHKDELVLPVRSKKSPFSGLWCVVLGLVIFLSGLIMASVCLYRYYFNPQIPEDSFFHCRMMYEDPVFAPLLGRQELEEKVGIYLDDNYEQISVPVPDFGSGDPADIIHDFHRGLTAYYDIALDKCYVIELNTTIVMPPRNLWELLVNVKRGTYLPQTYMIQEEMVVTGRVRNLRQLGPFIHRLCYAKETYRLRRRSGQRRIDKRETKNCHTIRHFENTFAVETKICERLLL" misc_feature 456..734 /gene="itm2cb" /gene_synonym="fj35c02; itm2c; wu:...
AA_position 32
Synonym: fj35c02; itm2c; wu:fj35c02; zgc:66349
NM_199980.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio LRAT domain containing 1 (lratd1), mRNA. (1966 bp)
Splign:2.1.0" CDS 173..955 /gene="lratd1" /gene_synonym="fam84a; zgc:63724" /note="family with sequence similarity 84, member A" /codon_start=1 /product="protein LRATD1" /protein_id="NP_956912.1" /db_xref="GeneID:393590" /db_xref="ZFIN:ZDB-GENE-040426-1247" /translation="MGNQLDRITHLNYSELPTGDPSGIEKDELRVGVAYFFSDEEEELDDRSQSDSFKDNNSPSKDGPVARNEIEYTAFCCQECIYSKLRENEDLNVYSVKTLLTMCKPGDLLELVANAQPPHWAIFEGEDQVIHLYKGEIRKDSLFEISCGRQARIVNNRYRYRPLPADLVMQNASGHVGLSSGEICWTNSESFAAWCRFGKREFKAGGEVHSVEQRYFLKVHLSESTAHTLMFRSLEEMIRERRRVDASGILKELSLVTGKE" misc_feature 527..769 /gene="lratd1" /gene_synonym="fam84a; zgc...
AA_position 26
Synonym: fam84a; zgc:63724
NM_200618.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio proteasome 26S subunit, non-ATPase 8 (psmd8), mRNA. (1448 bp)
subunit, non-ATPase, 8" /codon_start=1 /product="26S proteasome non-ATPase regulatory subunit 8" /protein_id="NP_001002131.1" /db_xref="GeneID:415221" /db_xref="ZFIN:ZDB-GENE-040625-136" /translation="MASVLKETAGLYETLKAEWNKKNPNLNKCGELLSKLKISLLELNFLPTTGTKLTKQQLILARDVLEIGALWSILKKDIPSFERYMAQLKCYYFDYKDELPESAYRHQLLGLNLLFLLSQNRVSEFHTELERLSAKDIQTNVYIRHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDTLLDTIRDEIAGCIEKAYEQIQFNEATRVLFFSSPKKMTDYAKKRNWTQSPDGYYSFSTQHQKTEEVTIPSTELAKQVIEYARQLEMIV" misc_feature 394..738 /gene="psmd8" /gene_synonym="fa93g07; fb17c09; fb49a10; wu:fa93g07; wu:fb17c09; wu:fb49a10; zgc:86762" /note...
AA_position 96
Synonym: fa93g07; fb17c09; fb49a10; wu:fa93g07; wu:fb17c09; wu:fb49a10; zgc:86762
NM_001002131.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio ADP-ribosylation factor-like 10 (arl10), mRNA. (1170 bp)
protein_id="NP_001373165.1" /db_xref="GeneID:560654" /db_xref="ZFIN:ZDB-GENE-091204-51" /translation="MLSPPFVCHPLEGNRARVFQNKPGRITCTGQQKQQLSVCRARAAPALAPGALMVVLRHFSVAFSAAMAAVGTALFIALNLFYKRRVWTPESEYFTFREEEEERSEKQVLVLGLDGAGKSSVLQGLSGAGYRRGCRPTRGFNFISLNTPACQLDFLEIGGGEDLRMYWADYLRRTNILVYVVDSSDRSRLPQAKDELHRLLKAETDLPVVVLGNKQDKPDAVSVPELREALSLSSVADQRKLFLLAAQSGSDGLSRTCSLQKIQDLLLKLV" misc_feature 480..971 /gene="arl10" /gene_synonym="si:ch211-153m12.1" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A...
AA_position 193
Synonym: si:ch211-153m12.1
NM_001386236.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio si:ch73-111e15.1 (si:ch73-111e15.1), transcript variant X2, mRNA. (4573 bp)
gene="si:ch73-111e15.1" /codon_start=1 /product="CD209 antigen-like protein C" /protein_id="XP_005172686.1" /db_xref="GeneID:101885260" /db_xref="ZFIN:ZDB-GENE-110411-28" /translation="MDDDIYKNVNGTESEGMNRERGVKMEDMYVNAGSVGNHDYRTNSNTQQPPQNTGSNPVKTRSSRAALVCLVLLCFLLLTAVIALSVYIYTNQPNYPEERHQLLTKITNLTENKDELLTNIENLLKDREQLIQQHQIIAGWTYFQSSFYYLSNESKSWTDSRGDCKGRKADLITINNRQEQDFVMTLTRNKEFWIGLTDSEKEGQWKWVDGSTLTTGFWASFRSITEPNGGTRENCVLTHLKRHPELIGWIDHNCDASYQWICEKSILPVTF" misc_feature 2671..3048 /gene="si:ch73-111e15.1" /note="C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-...
AA_position 113
XM_005172629.5 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio si:ch73-111e15.1 (si:ch73-111e15.1), transcript variant X1, mRNA. (2465 bp)
gene="si:ch73-111e15.1" /codon_start=1 /product="CD209 antigen-like protein C" /protein_id="XP_068074681.1" /db_xref="GeneID:101885260" /db_xref="ZFIN:ZDB-GENE-110411-28" /translation="MDDDIYKNVNGTESEGMNRERGVKMEDMYVNAGSVGNHDYRTNSNTQQPPQNTGSNPVKTRSSRAALVCLVLLCFLLLTAVIALSVYIYTNQPNYPEERHQLLTKITNLTENKDELLTNIENLLKDREQLIQQHQIIAGWTYFQSSFYYLSNESKSWTDSRGDCKGRKADLITINNRQEQDFVMTLTRNKEFWIGLTDSEKEGQWKWVDGSTLTTGFWASFRSITEPNGGTRENCVLTHLKRHPELIGWIDHNCDASYQWICEKSILPVTF" ORIGIN //...
AA_position 113
XM_068218580.1 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio si:ch73-111e15.1 (si:ch73-111e15.1), transcript variant X2, mRNA. (4547 bp)
gene="si:ch73-111e15.1" /codon_start=1 /product="CD209 antigen-like protein C" /protein_id="XP_021335010.1" /db_xref="GeneID:101885260" /db_xref="ZFIN:ZDB-GENE-110411-28" /translation="MDDDIYKNVNGTESEGMNRERGVKMEDMYVNAGSVGNHDYRTNSNTQQPPQNTGSNPVKTRSSRAALVCLVLLCFLLLTAVIALSVYIYTNQPNYPEERHQLLTKITNLTENKDELLTNIENLLKDREQLIQQHQIIAGWTYFQSSFYYLSNESKSWTDSRGDCKGRKADLITINNRQEQDFVMTLTRNKEFWIGLTDSEKEGQWKWVDGSTLTTGFWASFRSITEPNGGTRENCVLTHLKRHPELIGWIDHNCDASYQWICEKSILPVTF" misc_feature 2665..3042 /gene="si:ch73-111e15.1" /note="C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-...
AA_position 113
XM_021479335.2 - Danio rerio (zebrafish) - NCBI - UCSC
PREDICTED: Danio rerio si:ch73-111e15.1 (si:ch73-111e15.1), transcript variant X1, mRNA. (2445 bp)
gene="si:ch73-111e15.1" /codon_start=1 /product="CD209 antigen-like protein C" /protein_id="XP_068080051.1" /db_xref="GeneID:101885260" /db_xref="ZFIN:ZDB-GENE-110411-28" /translation="MDDDIYKNVNGTESEGMNRERGVKMEDMYVNAGSVGNHDYRTNSNTQQPPQNTGSNPVKTRSSRAALVCLVLLCFLLLTAVIALSVYIYTNQPNYPEERHQLLTKITNLTENKDELLTNIENLLKDREQLIQQHQIIAGWTYFQSSFYYLSNESKSWTDSRGDCKGRKADLITINNRQEQDFVMTLTRNKEFWIGLTDSEKEGQWKWVDGSTLTTGFWASFRSITEPNGGTRENCVLTHLKRHPELIGWIDHNCDASYQWICEKSILPVTF" ORIGIN //...
AA_position 113
XM_068223950.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio nucleophosmin 1a (npm1a), mRNA. (1598 bp)
synonym="npm1; sb:cb487" /note="nucleophosmin 1; nucleophosmin 1a (nucleolar phosphoprotein B23, numatrin)" /codon_start=1 /product="nucleophosmin 1a" /protein_id="NP_955460.2" /db_xref="GeneID:266985" /db_xref="ZFIN:ZDB-GENE-021028-1" /translation="MDLEQMGPQTFLYGCELKAGKDITFNPEDDDYDHQLSVRMACVDPSTKDELNVVEIEGQDSEGQKVKAVLATLKPSTLPSVCLGGFEITPPVVFRLRTGSGPVHISGQHLVIMGGDQSFDEEEEEEEEEETVMTSKKRPALSTPKPSKKMKMDEEDDDDDDEDDDDEDDDEEDESEEESPVKEKKAPAKPKTPTQNGKGPKPSTPAKQTPQKGKKEQTPKTPQTPRTLADIKSKMMESVAKGVSLPKVQLKFENYVNNCFKGTDPKVVEELWKWRQTVK" misc_feature 167..466 /gene="npm1a" /gene_synonym="npm1; sb:cb487" /...
AA_position 48
Synonym: npm1; sb:cb487
NM_199428.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio four and a half LIM domains 5 (fhl5), mRNA. (1180 bp)
gene="fhl5" /gene_synonym="zgc:92375" /codon_start=1 /product="four and a half LIM domains protein 5" /protein_id="NP_001004112.1" /db_xref="GeneID:445475" /db_xref="ZFIN:ZDB-GENE-040822-3" /translation="MSTERFDCHYCKDTLLGKKYILKEDTQYCTKCYENLFANCCEVCSLPIGCNCKDLSYKDRHWHENCFKCAKCSRSLVDKPFAAKDELMLCTECYSHEYSSKCSTCKKTVMPGSRKMEYKGNSWHETCFLCQRCQQPIGTKSFIPKDNNYFCVPCFEKQFAYQCCACKKAITTGGVTYHDKPWHRECFTCIGCKRQLAGQRFTSRENYPYCLDCFSNLYAKKCVGCTKAITSLAGAKYISFEERQWHSECFTCMQCSVSLVGRGFLTQRDDILCTDCGREK" misc_feature 146..322 /gene="fhl5" /gene_synonym="zgc:92375" /note="The first LIM domain of Four and a half LIM...
AA_position 84
Synonym: zgc:92375
NM_001004112.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio carbonic anhydrase VIII (ca8), mRNA. (2294 bp)
in-frame stop codon" CDS 414..1259 /gene="ca8" /gene_synonym="zgc:110118" /EC_number="4.2.1.1" /note="CARP VIII" /codon_start=1 /product="carbonic anhydrase-related protein" /protein_id="NP_001017571.2" /db_xref="GeneID:550233" /db_xref="ZFIN:ZDB-GENE-050417-26" /translation="MADNVIEESGNYPGKDELDWGYEEGVEWGLLFPEANGEYQSPINLNSREARYDPQLLDVGLNPNYVVCRDCEVINDGHTVRIMLKSKSVVTGGPLPSDHEYELSEVRFHWGKENQRGSEHTVNFKAFPMELHLIHWNSTLFNSVEEAMGKKRGILIIALFVQVGKEHLGLKAITDVLQDLQYKGKTKIIPCFNPNTLLPDPLLRDYWVYEGSLTTPPCSENVTWILYRYPLTISQMQIEEFRRLRSHVKGAELPEGNDGMLGDNFRPTQPLSDRVVRAAFQ" misc_feature 486..1253 /gene="ca8" /gene...
AA_position 15
Synonym: zgc:110118
NM_001017571.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio small nuclear ribonucleoprotein polypeptide A (snrpa), mRNA. (1342 bp)
inference="alignment:Splign:2.1.0" CDS 43..888 /gene="snrpa" /gene_synonym="fc19d01; wu:fc19d01; zgc:77810" /codon_start=1 /product="U1 small nuclear ribonucleoprotein A" /protein_id="NP_955965.1" /db_xref="GeneID:324121" /db_xref="ZFIN:ZDB-GENE-030131-2841" /translation="MAGQEMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRTLKMKGQAFVIFKEINSASNALRSMQGFPFYDKPMRIQYSKQDSDIIAKMKGTFVERDRKKEKKKPKVPEAGAGKKGGSGATPAMAGVPAAIPGMPPMSQAPRMMPMPGQPPYMPPPGMMPPPNMAPGQMPPGAMPPGGMMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAAREALQGFKITQSNAMKISFAKK" misc_feature 61..327 /gene="snrpa" /gene_...
AA_position 23
Synonym: fc19d01; wu:fc19d01; zgc:77810
NM_199671.1 - Danio rerio (zebrafish) - NCBI - UCSC

Data Export:

下記より最大10000件まで検索結果を取得できます。

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/ja/dr/aa%3aKDEL
lang : ja | div : | spe : dr | query_string : aa:KDEL | format : html | download : 

0.000 | 0.000 | search_start;
0.088 | 0.088 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(aa:KDEL)?source=Danio rerio (zebrafish)?to=0&format=json
0.188 | 0.100 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=(aa:KDEL)?source=Danio rerio (zebrafish)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.194 | 0.005 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]