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2024-11-23 05:13:09, GGRNA : RefSeq release 226 (Sep, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Drosophila melanogaster Argonaute-1 (AGO1), transcript variant B, mRNA. (5738 bp)
ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1226..1588 /gene="AGO1" /locus_tag="Dmel_CG6671" /gene_synonym="Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-...
Synonym: Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20
NM_079010.4 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster Argonaute-1 (AGO1), transcript variant D, mRNA. (7888 bp)
ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1354..1716 /gene="AGO1" /locus_tag="Dmel_CG6671" /gene_synonym="Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-...
Synonym: Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20
NM_001259385.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster Argonaute-1 (AGO1), transcript variant A, mRNA. (3481 bp)
ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1097..1459 /gene="AGO1" /locus_tag="Dmel_CG6671" /gene_synonym="Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-...
Synonym: Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20
NM_166020.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster Argonaute-1 (AGO1), transcript variant C, mRNA. (7528 bp)
ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1354..1716 /gene="AGO1" /locus_tag="Dmel_CG6671" /gene_synonym="Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-...
Synonym: Ago; ago-1; Ago-1; AGO-1; ago1; Ago1; ago1-1; Agp1; anon-WO0257455.29; argonaute1; CG6671; dAgo1; dAGO1; Dm Ago1; dmAgo1; DmAgo1; Dmel\CG6671; l(2)04845; l(2)4845; l(2)k00208; l(2)k08121; MRE20
NM_166021.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster argonaute 2, transcript variant E (AGO2), mRNA. (3784 bp)
ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="Argonaute 2" /map="71E1-71E1" /db_xref="FLYBASE:FBgn0087035" /db_...Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="CG7439 gene product from transcript CG7439-RE; CG7439-PE; AGO2-PE; argonaute-2; ARGONAUTE2; argonaute...ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="PAZ domain, named PAZ after the proteins Piwi Argonaut and Zwille...
Synonym: AG02; ago; AGO 2; ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2
NM_001274953.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster argonaute 2, transcript variant B (AGO2), mRNA. (4050 bp)
ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="Argonaute 2" /map="71E1-71E1" /db_xref="FLYBASE:FBgn0087035" /db_...Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="CG7439 gene product from transcript CG7439-RB; CG7439-PB; AGO2-PB; argonaute-2; ARGONAUTE2; argonaute...ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="PAZ domain, named PAZ after the proteins Piwi Argonaut and Zwille...
Synonym: AG02; ago; AGO 2; ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2
NM_140518.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster argonaute 2, transcript variant C (AGO2), mRNA. (4117 bp)
ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="Argonaute 2" /map="71E1-71E1" /db_xref="FLYBASE:FBgn0087035" /db_...Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="CG7439 gene product from transcript CG7439-RC; CG7439-PC; AGO2-PC; argonaute-2; ARGONAUTE2; argonaute...ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2" /note="PAZ domain, named PAZ after the proteins Piwi Argonaut and Zwille...
Synonym: AG02; ago; AGO 2; ago-2; Ago-2; AGO-2; AGO1; ago2; Ago2; Ago2a; argonaute2; CG13452; CG7439; dAgo2; dAGO2; Dm Ago2; DmAgo2; Dmel\CG7439; eIF2C2
NM_168626.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/en/dm/Argonaute+%22PAZ+domain%22
lang : en | div : | spe : dm | query_string : Argonaute "PAZ domain" | format : html | download : 

0.000 | 0.000 | search_start;
0.080 | 0.080 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Drosophila melanogaster (fruit fly)?to=0&format=json
0.091 | 0.011 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?source=Drosophila melanogaster (fruit fly)?to=0&format=json
0.134 | 0.043 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))%26((full_search:*:PAZ+domain)%7C(nt:PAZ+domain)%7C(aa:PAZ+domain))?source=Drosophila melanogaster (fruit fly)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.136 | 0.002 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]