LOCUS       XM_018811536            2044 bp    mRNA    linear   INV 22-OCT-2018
DEFINITION  PREDICTED: Ciona intestinalis uncharacterized LOC108949438
            (LOC108949438), transcript variant X2, mRNA.
ACCESSION   XM_018811536
VERSION     XM_018811536.2
DBLINK      BioProject: PRJNA187185
KEYWORDS    RefSeq.
SOURCE      Ciona intestinalis (vase tunicate)
  ORGANISM  Ciona intestinalis
            Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
            Cionidae; Ciona.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_020169.2) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 22, 2018 this sequence version replaced XM_018811536.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Ciona intestinalis Annotation
                                           Release 104
            Annotation Version          :: 104
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Ciona intestinalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:7719"
                     /chromosome="4"
     gene            1..2044
                     /gene="LOC108949438"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 56 ESTs, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 166 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:108949438"
     CDS             84..1154
                     /gene="LOC108949438"
                     /codon_start=1
                     /product="uncharacterized protein LOC108949438 isoform X2"
                     /protein_id="XP_018667081.1"
                     /db_xref="GeneID:108949438"
                     /translation="

MGKKQANKKGGDNAQLIKKGGDNTQPKSMGPQNGGQKPSSDPAPTRRTKESNSSLWCMIFLITVGCGCAFSFFMYEMDLTKTALVKEIEQLSKELETVASLRSDIKANKASLNGLSKVQDSFEAMKDQMKQSEQSTRSFNVEIPKLSSRVKQSEETLKNQLTHMEKSIQQLEARNSERISLLEQFNAKEIERLTKLTVETKQLAEGLRANHADLQQNMKTEISDSLRKVVQDVAQLQASVEYFNTKETSLQEEISKMKLKSVTDVDLNEVKEQVLQLTDKATKTGNAYASVQGAIDDASQRFESQISVLTAHVKSGKDELSMMREEVNGLRQLSDEIKKMAEPQAQEAAKPKEKKP"

     misc_feature    <333..>836
                     /gene="LOC108949438"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
ORIGIN      

tcaggttttgacattgtgataactttccacctgttgggtatttaaagttgatctattgctgtctgtctaactttaagtttaaaatggggaaaaaacaagccaataaaaaagggggtgataatgcacaactaataaaaaaagggggtgataatacacaaccaaaatctatggggcctcaaaatgggggtcaaaagccatcaagtgaccctgcaccgaccaggagaaccaaggagtcaaatagcagtctctggtgtatgatatttctcatcactgtgggatgtggatgtgcattctccttcttcatgtatgaaatggatctcacaaagacagcacttgtcaaagagattgaacaactttcaaaggagcttgaaactgtggcatcattgagatctgacatcaaagccaacaaagcaagtttaaacggtttgtccaaggttcaggattcatttgaagcaatgaaggatcaaatgaagcaatctgagcagagcacacgcagttttaatgttgagattccaaaattatcatcaagagtcaagcaaagtgaagaaactctgaagaatcaacttactcacatggaaaagtccatacagcaacttgaggcaagaaactccgagagaatttccctgttggagcagtttaatgctaaagagattgaaagattgactaaattaactgttgagacaaaacagcttgctgaaggactgagagccaatcatgcagatttacaacaaaacatgaaaacggaaatttctgattctctgagaaaagtggttcaagatgtagctcaattgcaggcttctgttgagtatttcaacacaaaggaaacttccctgcaggaggaaatatctaagatgaagctcaagtctgtcaccgatgtggatctgaatgaagtgaaagaacaggttcttcaactcacagataaagccacaaaaactgggaatgcgtacgccagtgtacaaggtgccattgacgatgcatctcagcggtttgaatctcaaatctccgtgcttactgctcatgtgaagtccggtaaagatgaattatccatgatgcgtgaagaagtgaatggtcttcgccaattaagtgatgagattaaaaagatggcagaaccacaggcccaagaagctgcaaaaccaaaggagaaaaaaccttaggagacgaacactttgaaactttttgcaggcaaaattatgcggaattttttttattgaaattaggtacaatcttcagtatgtttattattaggtacagtataactgtgtgtgttgaaattctgcagtaaaatttgtaattttttttatataaaattgtaagctgaccaagttgtttgattgtgtagttatttgtagatgtggaaaagtagatagtagataatatcttataaaaatgtaaagtttataaaacaagtgtaataactagtttgtagtgcaataaaattataaaattttctgttaagctcttccatattgttataaaaattttggtttcgatctatttcaatagtggttcatttttctctgttagtttcattttgctgaacaaaaactggtacagtatattttctagagcatagctatttagtggtacaacatatttttgtaatttgaaaacaacaatatttgtgaacttttgtaaattaataattatcaccagccacttccaccatgatcatagtgtgtgaaagcaatatcattatattattcctataacttcttaaaaaagtgtctaaacattgtttattcgacaataaaaaataatgaatgtattctgaaatgttggaacattattcctgaatgtatttacaaaagtttttgtctttacctgttaaaatactgtgcaaattttatattttctgttaaaagttcgttaaactaaagctaaaatttaatatgcataagtttattttatattgaatcaatcatccaaaacagtgccaatgttttttgcaagcttaattttcacataaacaatatatgtattcgtttcaccacaacaaacaatagtaatttaccaagtttaaaacaaggtgtgatttttggtgcag

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