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2024-11-23 05:44:29, GGRNA : RefSeq release 226 (Sep, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Arabidopsis thaliana translocase of the outer mitochondrial membrane 6 (TOM6), mRNA. (775 bp)
Other Eukaryotes - 0 (source: NCBI BLink)." /codon_start=1 /product="translocase of the outer mitochondrial membrane 6" /protein_id="NP_564545.1" /db_xref="Araport:AT1G49410" /db_xref="GeneID:841365" /db_xref="TAIR:AT1G49410" /translation="MFPGMFMRKPDKAEALKQLRTHVALFGSWVVIIRAAPYVLSYFSDSKDELKIDF" ORIGIN // REFERENCE 1 (bases 1 to 775) AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S., White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L., Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F., Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R., Creasy,T.H.,...
AA_position 47
Synonym: translocase of the outer mitochondrial membrane 6
NM_103831.5 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana SAP domain-containing protein (AT5G63460), mRNA. (742 bp)
." /codon_start=1 /product="SAP domain-containing protein" /protein_id="NP_001190607.1" /db_xref="GeneID:836465" /db_xref="TAIR:AT5G63460" /db_xref="Araport:AT5G63460" /translation="MEASSSQPSDSSDQTASKFLSDLPSRGFLSSTVVSSNPGSLRVYICEHDTSPPEGSSSRTGERDFQSLTVEKLRAMLKEKGLPTKGRKDELIARLKSAN" misc_feature 245..>358 /locus_tag="AT5G63460" /gene_synonym="MLE2.9; MLE2_9" /note="Det1 complexing ubiquitin ligase; Region: DDA1; pfam10172" /db_xref="CDD:401980" misc_feature 386..487 /locus_tag="AT5G63460" /gene_synonym="MLE2.9; MLE2_9" /note="SAP domain; Region: SAP; pfam02037" /db_xref="CDD...
AA_position 88
Synonym: MLE2.9; MLE2_9
NM_001203678.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana E2F-associated phosphoprotein (AT5G08320), mRNA. (1018 bp)
AT5G08320" CDS 117..440 /locus_tag="AT5G08320" /gene_synonym="F8L15.50; F8L15_50" /codon_start=1 /product="E2F-associated phosphoprotein" /protein_id="NP_001331548.1" /db_xref="GeneID:830728" /db_xref="Araport:AT5G08320" /db_xref="TAIR:AT5G08320" /translation="MASPTNSQKTVSDDEEVDYSIKPEFYDSDIDDKDELWMDKKRDGRTSDALLSCPACFTTVCLECQRYFPLSTSELGVLSSYDCYIPSRLCFLNVARAPLFNPHQCVC" misc_feature 192..>314 /locus_tag="AT5G08320" /gene_synonym="F8L15.50; F8L15_50" /note="E2F-associated phosphoprotein; Region: Eapp_C; pfam10238" /db_xref="CDD:463015" ORIGIN // REFERENCE 1 (bases 1 to 1018) AUTHORS Tabata,S.,...
AA_position 33
Synonym: F8L15.50; F8L15_50
NM_001342995.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana thioredoxin H-type 1 (TRX1), mRNA. (704 bp)
." /codon_start=1 /product="thioredoxin H-type 1" /protein_id="NP_190672.1" /db_xref="GeneID:824267" /db_xref="TAIR:AT3G51030" /db_xref="Araport:AT3G51030" /translation="MASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA" misc_feature 209..484 /gene="TRX1" /locus_tag="AT3G51030" /gene_synonym="ARABIDOPSIS THALIANA THIOREDOXIN H-TYPE 1; ATTRX H1; ATTRX1; THIOREDOXIN; thioredoxin H-type 1" /note="TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II...
AA_position 102
Synonym: ARABIDOPSIS THALIANA THIOREDOXIN H-TYPE 1; ATTRX H1; ATTRX1; THIOREDOXIN; thioredoxin H-type 1
NM_114963.5 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana superoxide dismutase 1 copper chaperone-like protein (AT4G15562), mRNA. (674 bp)
locus_tag="AT4G15562" /codon_start=1 /product="superoxide dismutase 1 copper chaperone-like protein" /protein_id="NP_001328049.1" /db_xref="GeneID:28720132" /db_xref="Araport:AT4G15562" /translation="MGCSISLNQPDTPKDFSHVEFKMPECSICERAMTHTISKFKGVTLCVPDKENQKIKVSGSFNKEKLLKKIMKVIKELEIHDGKNEEKDELIRKKQEETEMAKIMMLNDENANRCTIS" ORIGIN // REFERENCE 1 (bases 1 to 674) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R...
AA_position 87
NM_001341053.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana thioredoxin 2 (TRX2), mRNA. (697 bp)
." /codon_start=1 /product="thioredoxin 2" /protein_id="NP_198811.1" /db_xref="GeneID:833992" /db_xref="TAIR:AT5G39950" /db_xref="Araport:AT5G39950" /translation="MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSKLRA" misc_feature 212..481 /gene="TRX2" /locus_tag="AT5G39950" /gene_synonym="Arabidopsis thioredoxin h2; ATH2; ATTRX2; ATTRXH2; MYH19.110; MYH19_110; THIOREDOXIN; thioredoxin 2; THIOREDOXIN H2; TRXH2" /note="TRX family; composed of two groups: Group I, which includes proteins that exclusively...
AA_position 121
Synonym: Arabidopsis thioredoxin h2; ATH2; ATTRX2; ATTRXH2; MYH19.110; MYH19_110; THIOREDOXIN; thioredoxin 2; THIOREDOXIN H2; TRXH2
NM_123358.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana uncharacterized protein (AT2G07692), partial mRNA. (839 bp)
." /codon_start=1 /product="uncharacterized protein" /protein_id="NP_178784.1" /db_xref="Araport:AT2G07692" /db_xref="GeneID:815368" /db_xref="TAIR:AT2G07692" /translation="MPRTELILNAAVILYTMIPPDAHSLGSEGRVVNGNWRDTSDVKEGSLPREVTKQVNGSLSSRTKQVNEFSKHTRFLVDISFSCCSLINRSLWESAQKDELSDSFGKALTTKPECLAVRETPRNFRRNLCLVIPSLN" ORIGIN // REFERENCE 1 (bases 1 to 839) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M.,...
AA_position 97
Synonym: T18C6.10; T18C6_10
NM_126743.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Toll-Interleukin-Resistance (TIR) domain family protein (AT1G57850), partial mRNA. (438 bp)
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)." /codon_start=1 /product="Toll-Interleukin-Resistance (TIR) domain family protein" /protein_id="NP_001154434.1" /db_xref="Araport:AT1G57850" /db_xref="GeneID:842160" /db_xref="TAIR:AT1G57850" /translation="MEQGKKSERSMKKKQRRRWKKREKTREDVNKDKDELRGKTMTNLFVRIKESKIALVIFSSRYAESSWCMDELVKMKKRADKGKLQVIPIFYKVRARDVRGQTGEFGETFWALARTSRGDQIMEWKEALECISNKMGLSLGDKRYS" misc_feature <94..399 /locus_tag="AT1G57850" /gene_synonym="F12K22.22; F12K22_22" /note="TIR domain; Region: TIR; pfam01582" /db_xref="CDD:396246" ORIGIN // REFERENCE 1 (bases 1 to 438)...
AA_position 33
Synonym: F12K22.22; F12K22_22
NM_001160962.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana E2F-associated phosphoprotein (AT5G08320), mRNA. (777 bp)
Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink)." /codon_start=1 /product="E2F-associated phosphoprotein" /protein_id="NP_196449.1" /db_xref="GeneID:830728" /db_xref="TAIR:AT5G08320" /db_xref="Araport:AT5G08320" /translation="MASPTNSQKTVSDDEEVDYSIKPEFYDSDIDDKDELWMDKKRDGRTSDALLSCPACFTTVCLECQRHEQYVTQYRAVFVVNCKVGTDTVLQQNTMPLKVGKRRRDSEMQETGSEDSEKVNPVFCSACSTEIGVVDSEEIYHFFNVIPSEP" misc_feature 184..552 /locus_tag="AT5G08320" /gene_synonym="F8L15.50; F8L15_50" /note="E2F-associated phosphoprotein; Region: Eapp_C; pfam10238" /db_xref="CDD:463015" ORIGIN // REFERENCE 1...
AA_position 33
Synonym: F8L15.50; F8L15_50
NM_120915.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana F-box family protein (SLY1), mRNA. (1204 bp)
." /codon_start=1 /product="F-box family protein" /protein_id="NP_194152.1" /db_xref="GeneID:828522" /db_xref="TAIR:AT4G24210" /db_xref="Araport:AT4G24210" /translation="MKRSTTDSDLAGDAHNETNKKMKSTEEEEIGFSNLDENLVYEVLKHVDAKTLAMSSCVSKIWHKTAQDERLWELICTRHWTNIGCGQNQLRSVVLALGGFRRLHSLYLWPLSKPNPRARFGKDELKLTLSLLSIRYYEKMSFTKRPLPESK" misc_feature 476..607 /gene="SLY1" /locus_tag="AT4G24210" /gene_synonym="SLEEPY1; T22A6.40; T22A6_40" /note="F-box domain found in Arabidopsis thaliana F-box protein GID2 and similar proteins; Region: F-box_AtGID2-like; cd22151" /db_xref="CDD:438922" misc_feature order...
AA_position 122
Synonym: SLEEPY1; T22A6.40; T22A6_40
NM_118554.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana SKP1-like 13 (SK13), mRNA. (688 bp)
Viruses - 11; Other Eukaryotes - 169 (source: NCBI BLink)." /codon_start=1 /product="SKP1-like 13" /protein_id="NP_567090.1" /db_xref="GeneID:825171" /db_xref="TAIR:AT3G60010" /db_xref="Araport:AT3G60010" /translation="MSKMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTEESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE" misc_feature 53..400 /gene="SK13" /locus_tag="AT3G60010" /gene_synonym="ASK13; SKP1-like 13; T2O9.1" /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in S-phase kinase-...
AA_position 72
Synonym: ASK13; SKP1-like 13; T2O9.1
NM_115864.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana mediator of RNA polymerase II transcription subunit-like protein (AT3G52860), mRNA. (648 bp)
RNA polymerase II transcription subunit-like protein" /protein_id="NP_190854.1" /db_xref="GeneID:824452" /db_xref="TAIR:AT3G52860" /db_xref="Araport:AT3G52860" /translation="MDYQQKPPQSSDPSPSPPDRPPGIRSPETPSNNQNNDIEDIMACVTALEAALLPCLPARELQAIDRSPHPSHQIDVERHARDFMEAAKKLQLYFMGLKREDRAPSRAESLKKDIAVMEEELKTKDELIKKHMRLFQESQKLVKEQIEKHRDELEKV" misc_feature 154..453 /locus_tag="AT3G52860" /note="Mediator complex subunit 28; Region: Med28; pfam11594" /db_xref="CDD:463302" ORIGIN // REFERENCE 1 (bases 1 to 648) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H...
AA_position 124
NM_115146.6 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Toll-Interleukin-Resistance (TIR) domain family protein (AT1G57850), mRNA. (689 bp)
AT1G57850" /gene_synonym="F12K22.22; F12K22_22" /codon_start=1 /product="Toll-Interleukin-Resistance (TIR) domain family protein" /protein_id="NP_176094.1" /db_xref="Araport:AT1G57850" /db_xref="GeneID:842160" /db_xref="TAIR:AT1G57850" /translation="MTILSLANDDFHRVFLSFRGDQLRYSFVSHLLDAFERHGILCFVDKDELRGKTMTNLFVRIKESKIALVIFSSRYAESSWCMDELVKMKKRADKGKLQVIPIFYKVRARDVRGQTGEFGETFWALARTSRGDQIMEWKEALECISNKMGLSLGDKRYS" misc_feature 184..588 /locus_tag="AT1G57850" /gene_synonym="F12K22.22; F12K22_22" /note="TIR domain; Region: TIR; pfam01582" /db_xref="CDD:396246" ORIGIN // REFERENCE 1 (bases 1 to 689)...
AA_position 46
Synonym: F12K22.22; F12K22_22
NM_104578.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana ovate family protein 6 (OFP6), mRNA. (1237 bp)
." /codon_start=1 /product="ovate family protein 6" /protein_id="NP_680125.1" /db_xref="GeneID:824418" /db_xref="TAIR:AT3G52525" /db_xref="Araport:AT3G52525" /translation="MATKSKKKILKTVSVVDISCGNCIKPTFASIFNFFSKKPKRPSSTYRHCHSSISSATPSSTPLATASVAVEKDSDDPYLDFRQSMLQMILENQIYSKDELRELLQCFLSLNSHYHHGIIVRAFSEIWEDVSSAAASAVEASPLITRHVSRASRDYYNYY" misc_feature 434..601 /gene="OFP6" /locus_tag="AT3G52525" /gene_synonym="ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 6; ATOFP6; ovate family protein 6" /note="Transcriptional repressor, ovate; Region: Ovate; pfam04844" /db_xref="CDD:461454" ORIGIN...
AA_position 97
Synonym: ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 6; ATOFP6; ovate family protein 6
NM_148870.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana SAP domain-containing protein (AT5G63460), mRNA. (832 bp)
domain-containing protein" /protein_id="NP_974986.1" /db_xref="GeneID:836465" /db_xref="TAIR:AT5G63460" /db_xref="Araport:AT5G63460" /translation="MEASSSQPSDSSDQTASKFLSDLPSRGFLSSTVVSSNPGSLRVYICEHDTSPPEGQLIKTNQQNILIRSLLLKKQKGESSSKDSKGTAEDGPKKRAANRALDDRSSAKRAANASRQGSSSRTGERDFQSLTVEKLRAMLKEKGLPTKGRKDELIARLKSAN" misc_feature 161..337 /locus_tag="AT5G63460" /gene_synonym="MLE2.9; MLE2_9" /note="Det1 complexing ubiquitin ligase; Region: DDA1; pfam10172" /db_xref="CDD:401980" misc_feature 353..>589 /locus_tag="AT5G63460" /gene_synonym="MLE2.9; MLE2_9" /note="poly [ADP-ribose] polymerase; Provisional...
AA_position 150
Synonym: MLE2.9; MLE2_9
NM_203257.2 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana SAP domain-containing protein (AT5G63460), mRNA. (977 bp)
domain-containing protein" /protein_id="NP_201151.2" /db_xref="GeneID:836465" /db_xref="TAIR:AT5G63460" /db_xref="Araport:AT5G63460" /translation="MEASSSQPSDSSDQTASKFLSDLPSRGFLSSTVVSSNPGSLRVYICEHDTSPPEGQLIKTNQQNILIRSLLLKKQKGESSSKDSKGTAEDGPKKRAANRALDDRSSAKRAANASRQEGSSSRTGERDFQSLTVEKLRAMLKEKGLPTKGRKDELIARLKSAN" misc_feature 221..397 /locus_tag="AT5G63460" /gene_synonym="MLE2.9; MLE2_9" /note="Det1 complexing ubiquitin ligase; Region: DDA1; pfam10172" /db_xref="CDD:401980" misc_feature 413..>652 /locus_tag="AT5G63460" /gene_synonym="MLE2.9; MLE2_9" /note="poly [ADP-ribose] polymerase; Provisional...
AA_position 151
Synonym: MLE2.9; MLE2_9
NM_125741.5 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana SAP domain-containing protein (AT5G63460), mRNA. (872 bp)
protein" /protein_id="NP_001190606.1" /db_xref="GeneID:836465" /db_xref="TAIR:AT5G63460" /db_xref="Araport:AT5G63460" /translation="MEASSSQPSDSSDQTASKFLSDLPSRGFLSSTVVSSNPGSLRVYICEHDTSPPVIGSLRIISFRIKGQLIKTNQQNILIRSLLLKKQKGESSSKDSKGTAEDGPKKRAANRALDDRSSAKRAANASRQEGSSSRTGERDFQSLTVEKLRAMLKEKGLPTKGRKDELIARLKSAN" misc_feature 162..374 /locus_tag="AT5G63460" /gene_synonym="MLE2.9; MLE2_9" /note="Det1 complexing ubiquitin ligase; Region: DDA1; pfam10172" /db_xref="CDD:401980" misc_feature 405..>629 /locus_tag="AT5G63460" /gene_synonym="MLE2.9; MLE2_9" /note="poly [ADP-ribose] polymerase; Provisional;...
AA_position 163
Synonym: MLE2.9; MLE2_9
NM_001203677.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana glycosyltransferase family protein 28 (AT4G16710), mRNA. (962 bp)
CDS 249..779 /locus_tag="AT4G16710" /gene_synonym="DL4380W; FCAALL.10" /codon_start=1 /product="glycosyltransferase family protein 28" /protein_id="NP_001328518.1" /db_xref="GeneID:827374" /db_xref="Araport:AT4G16710" /db_xref="TAIR:AT4G16710" /translation="MEEDRENAKRVVFVTVGTTSFDALVKAVVSQNVKDELQKRGFTHLLIQMGRGIFFPTKCDGADGSLVVDYFTFSSSIADYIRSASLVISHAGSGSIFETLKLGKPLIVVVNEDLMDNHQCELAEALEERKHLYYTRPHSLHQTLTKMELGSLVQYTPGDGTPVARIIDRFLGFPDD" misc_feature 279..758 /locus_tag="AT4G16710" /gene_synonym="DL4380W; FCAALL.10" /note="Glycosyltransferase family 28 C-terminal domain; Region: Glyco_tran_28_C;...
AA_position 34
Synonym: DL4380W; FCAALL.10
NM_001341131.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana glycosyltransferase family protein 28 (AT4G16710), mRNA. (1139 bp)
Plants - 50; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink)." /codon_start=1 /product="glycosyltransferase family protein 28" /protein_id="NP_193404.1" /db_xref="GeneID:827374" /db_xref="TAIR:AT4G16710" /db_xref="Araport:AT4G16710" /translation="MEEDRENAKRVVFVTVGTTSFDALVKAVVSQNVKDELQKRGFTHLLIQMGRGIFFPTKCDGADGSLVVDYFTFSSSIADYIRSASLVISHAGSGSIFETLKLGKPLIVVVNEDLMDNHQCELAEALEERKHLYYTRPHSLHQTLTKMELGSLVQYTPGDGTPVARIIDRFLGFPDD" misc_feature 381..860 /locus_tag="AT4G16710" /gene_synonym="DL4380W; FCAALL.10" /note="Glycosyltransferase family 28 C-terminal domain; Region: Glyco_tran_28_C;...
AA_position 34
Synonym: DL4380W; FCAALL.10
NM_117772.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana glycosyltransferase family protein 28 (AT4G16710), mRNA. (1204 bp)
CDS 416..946 /locus_tag="AT4G16710" /gene_synonym="DL4380W; FCAALL.10" /codon_start=1 /product="glycosyltransferase family protein 28" /protein_id="NP_001328517.1" /db_xref="GeneID:827374" /db_xref="Araport:AT4G16710" /db_xref="TAIR:AT4G16710" /translation="MEEDRENAKRVVFVTVGTTSFDALVKAVVSQNVKDELQKRGFTHLLIQMGRGIFFPTKCDGADGSLVVDYFTFSSSIADYIRSASLVISHAGSGSIFETLKLGKPLIVVVNEDLMDNHQCELAEALEERKHLYYTRPHSLHQTLTKMELGSLVQYTPGDGTPVARIIDRFLGFPDD" misc_feature 446..925 /locus_tag="AT4G16710" /gene_synonym="DL4380W; FCAALL.10" /note="Glycosyltransferase family 28 C-terminal domain; Region: Glyco_tran_28_C;...
AA_position 34
Synonym: DL4380W; FCAALL.10
NM_001341130.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana glycosyltransferase family protein 28 (AT4G16710), mRNA. (1152 bp)
Plants - 50; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink)." /codon_start=1 /product="glycosyltransferase family protein 28" /protein_id="NP_849397.1" /db_xref="GeneID:827374" /db_xref="TAIR:AT4G16710" /db_xref="Araport:AT4G16710" /translation="MEEDRENAKRVVFVTVGTTSFDALVKAVVSQNVKDELQKRGFTHLLIQMGRGIFFPTKCDGADGSLVVDYFTFSSSIADYIRSASLVISHAGSGSIFETLKLGKPLIVVVNEDLMDNHQCELAEALEERKHLYYTRPHSLHQTLTKMELGSLVQYTPGDGTPVARIIDRFLGFPDD" misc_feature 394..873 /locus_tag="AT4G16710" /gene_synonym="DL4380W; FCAALL.10" /note="Glycosyltransferase family 28 C-terminal domain; Region: Glyco_tran_28_C;...
AA_position 34
Synonym: DL4380W; FCAALL.10
NM_179066.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana ADP-ribosylation factor C1 (ARFC1), mRNA. (973 bp)
." /codon_start=1 /product="ADP-ribosylation factor C1" /protein_id="NP_001189951.1" /db_xref="GeneID:821868" /db_xref="TAIR:AT3G22950" /db_xref="Araport:AT3G22950" /translation="MGAFMSRFWFMMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARISFMKDELARLLGHEDLQNSVILVFANKQDLKDAMTPAEITDALNLHSIKNHDWHIQASCAVTGEGLYDGLGWIAQKVTGKATS" misc_feature 245..766 /gene="ARFC1" /locus_tag="AT3G22950" /gene_synonym="ADP-ribosylation factor C1; ATARFC1" /note="Arf-like 5 (Arl5) and 8 (Arl8) GTPases; Region: Arl5_Arl8; cd04153" /db_xref="CDD:133353" misc_feature...
AA_position 104
Synonym: ADP-ribosylation factor C1; ATARFC1
NM_001203022.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana ADP-ribosylation factor C1 (ARFC1), mRNA. (989 bp)
." /codon_start=1 /product="ADP-ribosylation factor C1" /protein_id="NP_188935.1" /db_xref="GeneID:821868" /db_xref="TAIR:AT3G22950" /db_xref="Araport:AT3G22950" /translation="MGAFMSRFWFMMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARISFMKDELARLLGHEDLQNSVILVFANKQDLKDAMTPAEITDALNLHSIKNHDWHIQASCAVTGEGLYDGLGWIAQKVTGKATS" misc_feature 262..783 /gene="ARFC1" /locus_tag="AT3G22950" /gene_synonym="ADP-ribosylation factor C1; ATARFC1" /note="Arf-like 5 (Arl5) and 8 (Arl8) GTPases; Region: Arl5_Arl8; cd04153" /db_xref="CDD:133353" misc_feature...
AA_position 104
Synonym: ADP-ribosylation factor C1; ATARFC1
NM_113195.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana yacP-like NYN domain protein (AT2G02410), mRNA. (840 bp)
tag="AT2G02410" /gene_synonym="AT2G02420; T16F16.20; T16F16_20" /codon_start=1 /product="yacP-like NYN domain protein" /protein_id="NP_001324001.1" /db_xref="Araport:AT2G02410" /db_xref="GeneID:814772" /db_xref="TAIR:AT2G02410" /translation="MHIYVKESEPEPPRIKSNVKHNLQLLKLWKEFQSRGSGMAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMKLKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGETCADAWIEKEARKNDLFTPKACSNRRLYENNC" misc_feature 503..>766 /locus_tag="AT2G02410" /gene_synonym="AT2G02420; T16F16.20; T16F16_20" /note="PIN (PilT N terminus) domain: Superfamily; Region: PIN_SF;...
AA_position 53
Synonym: AT2G02420; T16F16.20; T16F16_20
NM_001335117.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Toll-Interleukin-Resistance (TIR) domain family protein (AT1G57850), mRNA. (814 bp)
Other Eukaryotes - 0 (source: NCBI BLink)." /codon_start=1 /product="Toll-Interleukin-Resistance (TIR) domain family protein" /protein_id="NP_001319261.1" /db_xref="Araport:AT1G57850" /db_xref="GeneID:842160" /db_xref="TAIR:AT1G57850" /translation="MTILSLANDDFHRVFLSFRGDQLRYSFVSHLLDAFERHGILCFVDKDELRGKTMTNLFVRIKESKIALVIFSSRYAESSWCMDELVKMKKRADKGKLQVIPIFYKVRARDVRGQTGEFGETFWALARTSRGDQIMEWKEALECISNKMGLSLGDKSSEADFIKEIVKEVKRVVAEIGCQATENHQCINFLPN" misc_feature 184..663 /locus_tag="AT1G57850" /gene_synonym="F12K22.22; F12K22_22" /note="TIR domain; Region: TIR; pfam01582" /db_xref="CDD:396246" ORIGIN //...
AA_position 46
Synonym: F12K22.22; F12K22_22
NM_001333807.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana endoplasmic reticulum auxin binding protein 1 (ABP1), mRNA. (1055 bp)
db_xref="GeneID:828120" /db_xref="TAIR:AT4G02980" /db_xref="Araport:AT4G02980" /translation="MIVLSVGSASSSPIVVVFSVALLLFYFSETSLGAPCPINGLPIVRNISDLPQDNYGRPGLSHMTVAGSVLHGMKEVEIWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLAETHGNFPGKPIEFPIFANSTIHIPINDAHQVKNTGHEDLQVLVIISRPPIKIFIYEDWFMPHTAARLKFPYYWDEQCIQESQKDEL" misc_feature 265..753 /gene="ABP1" /locus_tag="AT4G02980" /gene_synonym="ABP; AT-ERABP1; endoplasmic reticulum auxin binding protein 1; T4I9.14; T4I9_14" /note="Auxin binding protein; Region: Auxin_BP; pfam02041" /db_xref="CDD:396569" misc_feature order...
AA_position 195
Synonym: ABP; AT-ERABP1; endoplasmic reticulum auxin binding protein 1; T4I9.14; T4I9_14
NM_116532.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana plectin-like protein (AT3G08880), mRNA. (1451 bp)
." /codon_start=1 /product="plectin-like protein" /protein_id="NP_187500.2" /db_xref="GeneID:820036" /db_xref="TAIR:AT3G08880" /db_xref="Araport:AT3G08880" /translation="MGNASENFDIEDLMSYGDDLINLLNVKNGFDIISQSSEQFKALNFACHEDFNQIQGSIEDCKTKLYACKKKTEEAYSDIAAEDEIERLQKELDEEMEREFKLKDELRLVADELKDLNAQLSSIDEHKQSTKRKVRDDLRAEKKLSMYASVTNVIPDIDDPSKISGYMVDREKRLIEKFQFETNKMTAYETCNSIWSIINKQ" misc_feature 670 /locus_tag="AT3G08880" /note="family of the cytolysin A (ClyA) family alpha pore-forming toxins (alpha-PFT) including Bacillus cereus HblB, Aeromonas hydrophila AhlB, Bacillus thuringiensis...
AA_position 103
NM_111722.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana LDL receptor wingless signaling/trafficking chaperone (AT2G46000), mRNA. (929 bp)
db_xref="Araport:AT2G46000" /db_xref="GeneID:819208" /db_xref="TAIR:AT2G46000" /translation="MEKIVRSSSLILLVGLLLFMNFHGFVRIAEATKRRIEISDDLDDVEDNEEDESWKEWGKKATTPEFDPPPDFTNMGFDQIQEEMAKRTFGTVVGFVKLRLGVPRTKDVVIDIAMKWTKVLRTGGIGVRFMAVDRSTVMFNMQNGKLVTELREFVLSQEEAYEVKIGKQEFRRPGDPPFEDVFDKFQAEQRKDHEDGDGNKNDLTKDEL" ORIGIN // REFERENCE 1 (bases 1 to 929) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam...
AA_position 205
Synonym: F4I18.48
NM_130163.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Modifier of rudimentary (Mod(r)) protein (VPS37-1), mRNA. (900 bp)
." /codon_start=1 /product="Modifier of rudimentary (Mod(r)) protein" /protein_id="NP_190880.1" /db_xref="GeneID:824478" /db_xref="TAIR:AT3G53120" /db_xref="Araport:AT3G53120" /translation="MFNFWGSKDQQQGQSRPQEASSQSPWYSPSLVSSPSSSRPQSSGQISAQVSPGEAAGIIVFLKDKSVDELRKLLSDKDAYQQFLLSLDQVKVQNNIKDELRRETLQLARDNLEKEPQIMELRNQCRIIRTTELATAQEKLNELERQKEEILKFYSPGSLLHKLQEAMNQVDEESEALQEKFLEKEIDTAAFVQKYKKLRTTYHRRALIHLAAKTSNI" misc_feature 275..715 /gene="VPS37-1" /locus_tag="AT3G53120" /note="Modifier of rudimentary (Mod(r)) protein; Region: Mod_r; pfam07200" /db_xref="CDD:462117" ORIGIN // REFERENCE...
AA_position 97
NM_115172.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Pleckstrin homology (PH) domain superfamily protein (AT2G30060), mRNA. (1321 bp)
homology (PH) domain superfamily protein" /protein_id="NP_180567.1" /db_xref="Araport:AT2G30060" /db_xref="GeneID:817557" /db_xref="TAIR:AT2G30060" /translation="MASISNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVEEKESEKKPVEKAEENKKSEAVEEKKTEESVPSA" misc_feature 310..702 /locus_tag="AT2G30060" /gene_synonym="T27E13.20; T27E13_20" /note="Ran-binding domain; Region: RanBD_RanBP1; cd13179" /db_xref="CDD:270000" misc_feature order...
AA_position 134
Synonym: T27E13.20; T27E13_20
NM_128561.5 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana RNA polymerase II fifth largest subunit, D (RPB5D), mRNA. (1532 bp)
db_xref="Araport:AT2G41340" /db_xref="GeneID:818732" /db_xref="TAIR:AT2G41340" /translation="MEGKGKEIVVGHSISKSSVECHKYYLARRTTMEMLRDRGYDVSDEDINLSLQQFRALYGEHPDVDLLRISAKHRFDSSKKISVVFCGTGIVKVNAMRVIAADVLSRENITGLILVLQSHITNQALKAVELFSFKVELFEITDLLVNVSKHVLRPKHQVLNDKEKESLLKKFSIEEKQLPRLSSKDPIVRYYGLETGQVMKVTYKDELSESHVTYRCVS" misc_feature 306..917 /gene="RPB5D" /locus_tag="AT2G41340" /gene_synonym="''RNA polymerase II fifth largest subunit; D; D''; F13H10.11; F13H10_11; RNA polymerase II fifth largest subunit" /note="DNA-directed RNA polymerase II subunit family protein; Provisional; Region: PLN03111" /db_...
AA_position 204
Synonym: ''RNA polymerase II fifth largest subunit; D; D''; F13H10.11; F13H10_11; RNA polymerase II fifth largest subunit
NM_129697.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana yacP-like NYN domain protein (AT2G02410), mRNA. (1395 bp)
tag="AT2G02410" /gene_synonym="AT2G02420; T16F16.20; T16F16_20" /codon_start=1 /product="yacP-like NYN domain protein" /protein_id="NP_001323998.1" /db_xref="Araport:AT2G02410" /db_xref="GeneID:814772" /db_xref="TAIR:AT2G02410" /translation="MHIYVKESEPEPPRIKSNVKHNLQLLKLWKEFQSRGSGMAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMKLKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGETCADAWIEKEVVALREDGCPKVWVVTSDVCQQQAAHGAVLGHHIDVINSLCSYLVFDFGD" misc_feature 497..>835 /locus_tag="AT2G02410" /gene_synonym="AT2G02420; T16F16.20; T16F16_20" /note="PIN_domain of Bacillus subtilis YacP/...
AA_position 53
Synonym: AT2G02420; T16F16.20; T16F16_20
NM_001335110.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Rab GTPase-like A5A protein (RABA5E), partial mRNA. (657 bp)
NP_001318930.1" /db_xref="Araport:AT1G05810" /db_xref="GeneID:837091" /db_xref="TAIR:AT1G05810" /translation="MSSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCSST" misc_feature 28..522 /gene="RABA5E" /locus_tag="AT1G05810" /gene_synonym="ARA; ARA-1; ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG A5E; ATRAB11D; ATRABA5E; RAB GTPase homolog A5E; T20M3.8; T20M3_8" /note="Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25;...
AA_position 188
Synonym: ARA; ARA-1; ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG A5E; ATRAB11D; ATRABA5E; RAB GTPase homolog A5E; T20M3.8; T20M3_8
NM_001331584.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana RAN binding protein 1 (RANBP1), mRNA. (1137 bp)
codon_start=1 /product="RAN binding protein 1" /protein_id="NP_200667.2" /db_xref="GeneID:835973" /db_xref="TAIR:AT5G58590" /db_xref="Araport:AT5G58590" /translation="MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSVEENISEEKAKEAEEKEPAKEDKETKKEKVEEEKKTEAST" misc_feature 291..692 /gene="RANBP1" /locus_tag="AT5G58590" /gene_synonym="MZN1.4; MZN1_4; RAN binding protein 1" /note="Ran-binding domain; Region: RanBD_RanBP1; cd13179" /db_xref="CDD:270000" misc_feature order...
AA_position 131
Synonym: MZN1.4; MZN1_4; RAN binding protein 1
NM_125246.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana yacP-like NYN domain protein (AT2G02410), mRNA. (1506 bp)
TAIR:AT2G02410" CDS 457..1125 /locus_tag="AT2G02410" /gene_synonym="AT2G02420; T16F16.20; T16F16_20" /codon_start=1 /product="yacP-like NYN domain protein" /protein_id="NP_001324005.1" /db_xref="Araport:AT2G02410" /db_xref="GeneID:814772" /db_xref="TAIR:AT2G02410" /translation="MAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMKLKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGETCADAWIEKEVVALREDGCPKVWVVTSDVCQQQAAHGAGAYIWSSKALVSEIKSMHKEVEKMMQETRSTSFQGRLLKHNLDSEVVDALKDLRDKLSENETKR" misc_feature 592..1017 /locus_tag="AT2G02410" /gene_synonym="AT2G02420; T16F16.20; T16F16_20" /...
AA_position 15
Synonym: AT2G02420; T16F16.20; T16F16_20
NM_001335113.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana yacP-like NYN domain protein (AT2G02410), mRNA. (1064 bp)
TAIR:AT2G02410" CDS 110..778 /locus_tag="AT2G02410" /gene_synonym="AT2G02420; T16F16.20; T16F16_20" /codon_start=1 /product="yacP-like NYN domain protein" /protein_id="NP_001323999.1" /db_xref="Araport:AT2G02410" /db_xref="GeneID:814772" /db_xref="TAIR:AT2G02410" /translation="MAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMKLKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGETCADAWIEKEVVALREDGCPKVWVVTSDVCQQQAAHGAGAYIWSSKALVSEIKSMHKEVEKMMQETRSTSFQGRLLKHNLDSEVVDALKDLRDKLSENETKR" misc_feature 245..670 /locus_tag="AT2G02410" /gene_synonym="AT2G02420; T16F16.20; T16F16_20" /note...
AA_position 15
Synonym: AT2G02420; T16F16.20; T16F16_20
NM_001335111.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Metal-dependent phosphohydrolase (AT1G17330), mRNA. (1140 bp)
." /codon_start=1 /product="Metal-dependent phosphohydrolase" /protein_id="NP_173176.1" /db_xref="Araport:AT1G17330" /db_xref="GeneID:838304" /db_xref="TAIR:AT1G17330" /translation="MAAKTMRKAEELVEKAMKGNDASHDAWHVWRVRDLALSIAREEGLSSNSDSMEIVELAALLHDIGDYKYIRDPSEEKLVENFLDDEGIEETKKTKILTIINGMGFKDELAGVALCESLPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPEIKPRTELTKEQYIKREEQTTINHFHEKLLKLKKLMKTEAGKRRAEKRHKFMEEYLKEFYEEWDGST" misc_feature 156..797 /locus_tag="AT1G17330" /note="HD superfamily phosphodieaserase, includes HD domain of RNase Y...
AA_position 106
NM_101594.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana plasma membrane intrinsic protein 2E (PIP2E), mRNA. (2148 bp)
PIP2;6; PLASMA MEMBRANE INTRINSIC PROTEIN 2;6; plasma membrane intrinsic protein 2E; T7F6.18; T7F6_18" /codon_start=1 /product="plasma membrane intrinsic protein 2E" /protein_id="NP_001324169.1" /db_xref="Araport:AT2G39010" /db_xref="GeneID:818487" /db_xref="TAIR:AT2G39010" /translation="MTKDELTEEESLSGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVSNFNYPTSLNHMNNIKKYQKPS" misc_feature 372..>884 /gene="PIP2E" /locus_tag="AT2G39010" /gene_synonym="PIP2;6;...
AA_position 3
Synonym: PIP2;6; PLASMA MEMBRANE INTRINSIC PROTEIN 2;6; plasma membrane intrinsic protein 2E; T7F6.18; T7F6_18
NM_001336755.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana filament-like protein (DUF869) (AT1G21810), mRNA. (2679 bp)
Fungi - 6739; Plants - 4917; Viruses - 325; Other Eukaryotes - 15965 (source: NCBI BLink)." /codon_start=1 /product="filament-like protein (DUF869)" /protein_id="NP_173599.2" /db_xref="Araport:AT1G21810" /db_xref="GeneID:838784" /db_xref="TAIR:AT1G21810" /translation="MMTGTTLILEPVMDSKDELVKQHAKVAEDAVAGWEKAENEVVELKQKLEDAADKNIVLEDRVSHLDGALKECVRQLRQFRDEQEKNIQAAVTESTKELHSANTGLEKRVLELQKEAEAAKSENMMLRREFLTQREDLEIVMIERDLSTQAAETASKQHLDIIKKLAKLEAECRKLRILAKTSSSLSSNQSVDSHSDGGRERVEGSCSDSWASSAFISELDQIKNEKGGNRSLQGTTSSTEIDLMDDFLEMERLVALPTETQAKNSKDGYELSLMEKLEKIQAEKDDLEREVKCCREAEKRLSLEIEAVVGDKMELEDMLKRVEAEKAELKT...
AA_position 16
Synonym: T26F17.2
NM_102029.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana filament-like protein (DUF869) (AT1G21810), mRNA. (2351 bp)
db_xref="TAIR:AT1G21810" CDS 203..2092 /locus_tag="AT1G21810" /gene_synonym="T26F17.2" /codon_start=1 /product="filament-like protein (DUF869)" /protein_id="NP_001320941.1" /db_xref="Araport:AT1G21810" /db_xref="GeneID:838784" /db_xref="TAIR:AT1G21810" /translation="MMTGTTLILEPVMDSKDELVKQHAKVAEDAVAGWEKAENEVVELKQKLEDAADKNIVLEDRVSHLDGALKECVRQLRQFRDEQEKNIQAAVTESTKELHSANTGLEKRVLELQKEAEAAKSENMMLRREFLTQREDLEIVMIERDLSTQAAETASKQHLDIIKKLAKLEAECRKLRILAKTSSSLSSNQSVDSHSDGGRERVEGSCSDSWASSAFISELDQIKNEKGGNRSLQGTTSSTEIDLMDDFLEMERLVALPTETQAKNSKDGYELSLMEKLEKIQAEKDDLEREVKCCREAEKRLSLEIEAVVGDKMELEDMLKRVEAEKAELKTSF...
AA_position 16
Synonym: T26F17.2
NM_001332529.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Pleckstrin homology (PH) domain superfamily protein (SIRANBP), mRNA. (1516 bp)
homology (PH) domain superfamily protein" /protein_id="NP_172194.1" /db_xref="Araport:AT1G07140" /db_xref="GeneID:837225" /db_xref="TAIR:AT1G07140" /translation="MATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVEETKTEEKTEAKAVETAKTEVKAEEKKESEAEKSGEAKKTEESGPST" misc_feature 221..613 /gene="SIRANBP" /locus_tag="AT1G07140" /gene_synonym="F10K1.15; F10K1_15; RAN-BINDING PROTEIN SIRANBP" /note="Ran-binding domain; Region: RanBD_RanBP1; cd13179" /db_xref="CDD:270000"...
AA_position 132
Synonym: F10K1.15; F10K1_15; RAN-BINDING PROTEIN SIRANBP
NM_100588.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana decoy (DECOY), mRNA. (1182 bp)
Araport:AT1G14620" /db_xref="GeneID:838024" /db_xref="TAIR:AT1G14620" /translation="MPRSSLRLLAKPLLESRRGFCTSSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFRRRYPDEFLDIAKNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGATSDKPVWHFPEKVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTEEMPDLPSYKRFFFKCSVVAASKYDISNCEDFVWVTKDELLEFFPEQAEFFNKMIIS" misc_feature 475..897 /gene="DECOY" /locus_tag="AT1G14620" /gene_synonym="T5E21.12; T5E21_12" /note="Mitochondrial ribosomal protein L46; Region: NUDIX_MRP_L46; cd04661" /db_xref="CDD:467546" ORIGIN // REFERENCE 1 (bases 1 to 1182) AUTHORS Theologis,A., Ecker,J.R., Palm,C.J.,...
AA_position 213
Synonym: T5E21.12; T5E21_12
NM_101329.4 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana yacP-like NYN domain protein (AT2G02410), mRNA. (1387 bp)
T16F16.20; T16F16_20" /codon_start=1 /product="yacP-like NYN domain protein" /protein_id="NP_001324003.1" /db_xref="Araport:AT2G02410" /db_xref="GeneID:814772" /db_xref="TAIR:AT2G02410" /translation="MKTAGAPPQRGGAVYFNWSSSSCSYDSCRVLVVKMGGKSKKPHQSSSFKESEPEPPRIKSNVKHNLQLLKLWKEFQSRGSGMAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMKLKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGETCADAWIEKEARKNDLFTPKACSNRRLYENNC" misc_feature 473..>736 /locus_tag="AT2G02410" /gene_synonym="AT2G02420; T16F16.20; T16F16_20" /note="PIN (PilT N terminus) domain: Superfamily; Region: PIN_SF;...
AA_position 101
Synonym: AT2G02420; T16F16.20; T16F16_20
NM_001335115.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana yacP-like NYN domain protein (AT2G02410), mRNA. (1555 bp)
T16F16.20; T16F16_20" /codon_start=1 /product="yacP-like NYN domain protein" /protein_id="NP_001323996.1" /db_xref="Araport:AT2G02410" /db_xref="GeneID:814772" /db_xref="TAIR:AT2G02410" /translation="MKTAGAPPQRGGAVYFNWSSSSCSYDSCRVLVVKMGGKSKKPHQSSSFKESEPEPPRIKSNVKHNLQLLKLWKEFQSRGSGMAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMKLKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGETCADAWIEKEARKNDLFTPKACSNRRLYENNC" misc_feature 467..>730 /locus_tag="AT2G02410" /gene_synonym="AT2G02420; T16F16.20; T16F16_20" /note="PIN (PilT N terminus) domain: Superfamily; Region: PIN_SF;...
AA_position 101
Synonym: AT2G02420; T16F16.20; T16F16_20
NM_001335108.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana yacP-like NYN domain protein (AT2G02410), mRNA. (1343 bp)
InterPro DOMAIN/s: Protein of unknown function DUF901 (InterPro:IPR010298)." /codon_start=1 /product="yacP-like NYN domain protein" /protein_id="NP_001189501.1" /db_xref="Araport:AT2G02410" /db_xref="GeneID:814772" /db_xref="TAIR:AT2G02410" /translation="MLSITCSFSSYGRHFQSRGSGMAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMKLKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGETCADAWIEKEVVALREDGCPKVWVVTSDVCQQQAAHGAGAYIWSSKALVSEIKSMHKEVEKMMQETRSTSFQGRLLKHNLDSEVVDALKDLRDKLSENETKR" misc_feature 504..929 /locus_tag="AT2G02410" /gene_synonym="AT2G02420; T16F16.20; T16F16_20" /note="...
AA_position 36
Synonym: AT2G02420; T16F16.20; T16F16_20
NM_001202572.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana Erythronate-4-phosphate dehydrogenase family protein (AT1G75180), mRNA. (1828 bp)
Erythronate-4-phosphate dehydrogenase family protein" /protein_id="NP_849889.3" /db_xref="Araport:AT1G75180" /db_xref="GeneID:843855" /db_xref="TAIR:AT1G75180" /translation="MVEPYETRNNGEASQMIRYQSYNHHNSRLPSSLSSPLLDLRVFYVRISNFKVDHSTPEVLTITHIPLDPDSLLEINGVRMSMYSEGVSSQLRRDRVDKKSEVATFISTDNIRLSGSVKFEVYDKDELVLSGTLEMSGSNGFTGESKHSVKRWNMNCEAEITAESGFLKEKHIGGSELSSPLPTIEVYVTGCFSGTPIILTKTLQLGFRKKHGRVTALDSIPEYETDEPHKGNSSELDYQSVLR" ORIGIN // REFERENCE 1 (bases 1 to 1828) AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S., White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L., Brooks,S.Y.,...
AA_position 124
Synonym: F22H5.9; F22H5_9
NM_179558.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana spastin, putative (Protein of unknown function, DUF599) (AT5G46060), mRNA. (1203 bp)
." /codon_start=1 /product="spastin, putative (Protein of unknown function, DUF599)" /protein_id="NP_199418.1" /db_xref="GeneID:834647" /db_xref="TAIR:AT5G46060" /db_xref="Araport:AT5G46060" /translation="MEIFVKKEYLDLVLVPFGLIIVLSYHLFLLYRILYFPYHTIIGFMNIDKSIWVDRIMQARKDELGGALTVLSSSISASTFMASIALTLSSLIGAWIGSSPVSMTVFTGHFIYGDTSSITMVIKYTSLLICFLVAFCCFIQSTRCFLHANYLITTPGEDIPPDMVKRFVLRGGNYWSLGLRALYLALDLLLWLFGPVPMFINSVLMVICLYFLDSNSVAQPLYHRTFEAEQIVKKMRGVLPEQLTFRCN" misc_feature 244..861 /locus_tag="AT5G46060" /gene_synonym="MCL19.11; MCL19_11" /note="Protein of unknown function, DUF599;...
AA_position 61
Synonym: MCL19.11; MCL19_11
NM_123974.3 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana uncharacterized protein (AT2G46550), mRNA. (1637 bp)
Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3)." /codon_start=1 /product="uncharacterized protein" /protein_id="NP_001189763.1" /db_xref="Araport:AT2G46550" /db_xref="GeneID:819267" /db_xref="TAIR:AT2G46550" /translation="METRESYGSTGYDESSEKKLSELSFDPSSPWNLLSSEKAAPWWRTTDKDELASLVAQRSLDYVENCDLPTPQKMKRSYYGSPRGFDSDGLRDYSVSGQTIKGTSKGSSCKNRPEASSESDLSKSELLEALRRSQTRAREAENMAKEAYAEKEHLVKILLKQAAELFGYKQWLQLLQLEALYLQIKNKEIDNKNNDDPGVSIPCWSNGKARKEGRKRRSKRGKPNGAKYAVGLALGMSLVGAGLLLGWTVGWMQMLSF" ORIGIN // REFERENCE 1 (bases 1 to 1637) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P.,...
AA_position 48
Synonym: F13A10.8
NM_001202834.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (LpxC5), partial mRNA. (1194 bp)
AA_position 99
Synonym: AtLpxC5; lipid X C5
NM_001332667.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR
Arabidopsis thaliana UDP-3-O-acyl N-acetylglycosamine deacetylase family protein (LpxC1), partial mRNA. (1163 bp)
AA_position 99
Synonym: AtLpxC1; F5A9.18; lipid X C1
NM_001332665.1 - Arabidopsis thaliana (thale cress) - NCBI - TAIR

Data Export:

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Redirect URI : http://ggrna.dbcls.jp/en/at/aa%3aKDEL
lang : en | div : | spe : at | query_string : aa:KDEL | format : html | download : 

0.000 | 0.000 | search_start;
0.081 | 0.081 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:KDEL)?source=Arabidopsis thaliana (thale cress)?to=0&format=json
0.151 | 0.070 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(aa:KDEL)?source=Arabidopsis thaliana (thale cress)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.156 | 0.006 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]