2024-09-29 03:52:51, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NM_129615 780 bp mRNA linear PLN 20-OCT-2022 DEFINITION Arabidopsis thaliana uncharacterized protein (AT2G40530), mRNA. ACCESSION NM_129615 VERSION NM_129615.4 DBLINK BioProject: PRJNA116 BioSample: SAMN03081427 KEYWORDS RefSeq. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 780) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 780) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 780) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 4 (bases 1 to 780) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Sep 12, 2016 this sequence version replaced NM_129615.3. FEATURES Location/Qualifiers source 1..780 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" gene 1..780 /locus_tag="AT2G40530" /gene_synonym="T2P4.12; T2P4_12" /db_xref="Araport:AT2G40530" /db_xref="GeneID:818648" /db_xref="TAIR:AT2G40530" CDS 100..417 /locus_tag="AT2G40530" /gene_synonym="T2P4.12; T2P4_12" /inference="Similar to RNA sequence, EST:INSD:EL026425.1,INSD:DR307275.1,INSD:EL067971.1, INSD:EL243407.1,INSD:DR372359.1" /inference="similar to RNA sequence, mRNA:INSD:BT024670.1,INSD:AY085405.1" /note="unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, inflorescence meristem, petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)." /codon_start=1 /product="uncharacterized protein" /protein_id="NP_565935.1" /db_xref="Araport:AT2G40530" /db_xref="GeneID:818648" /db_xref="TAIR:AT2G40530" /translation="
MDATKIKFDVILLSFLLIISGIPSNLGLSTSVRGTTRSEPEAFHGGKFPAMKMRKLMAPNMEVDYSSDYYDGGSSSSTTSPSPPVPDYDDIYRRQGDVPSPGIGH"
ORIGIN
tataaccacaacgctacaatctcttcttgaacctaaagaaaacaagaagaaagaaaaaattcatataaattctcttatattttttcacctttatattgaatggatgcaacgaagattaagtttgacgttatattactctccttcttactaattatctccggaattccttcgaatcttgggttgagtacaagtgtgagaggcactactagatcggagccggaagcctttcacggcggtaaattcccggcaatgaagatgaggaagttgatggcaccaaacatggaagttgattattcgagtgactattatgatggaggatcatcatcatcaacaacatcaccatcacctccagtgcctgattatgatgatatttatagaaggcaaggtgatgtcccaagccctggtattggccactgatccatacatgtcatgcgtatatacacacacatatagacattttgtgttaaatatatttatacatacatgttgtttataatgtttttgtccttggaggtcgtctccgtatgatcagttttattttgctcttttccttcatttttttatattttgatcttatttcattttgtctttttagttcataaaatataattgtgcccttcctcttgaattgtctcatttcctcgtgttgatgggagttcatgtattcatgtatgtaatacaactcataataaaaaaactgtatttgtcagttgtaaaactctttttttttgttattaaaatggaatatttttctataacactaaaagagagtaatttacc
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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