2025-10-09 10:18:47, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XR_012835597 3420 bp RNA linear VRT 29-JUL-2025 DEFINITION PREDICTED: Balearica regulorum gibbericeps NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X4, misc_RNA. ACCESSION XR_012835597 VERSION XR_012835597.1 DBLINK BioProject: PRJNA613288 KEYWORDS RefSeq. SOURCE Balearica regulorum gibbericeps (East African grey crowned-crane) ORGANISM Balearica regulorum gibbericeps Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Gruiformes; Gruidae; Balearica. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_046188.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_011004875.1-RS_2025_07 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.4 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 07/24/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3420 /organism="Balearica regulorum gibbericeps" /mol_type="transcribed RNA" /isolate="bBalReg1" /sub_species="gibbericeps" /db_xref="taxon:100784" /chromosome="5" /sex="female" /tissue_type="blood" /dev_stage="adult" /geo_loc_name="Denmark: Copenhagen Zoo" /lat_lon="55.67278 N 12.52139 E" /collection_date="2008" /collected_by="Mads Bertelsen, Tom Gilbert" gene 1..3420 /gene="NRDE2" /note="NRDE-2, necessary for RNA interference, domain containing; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns" /db_xref="GeneID:104640439" misc_RNA 1..3420 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X4" /db_xref="GeneID:104640439" ORIGIN
actacatctcccgatatgctcggcgccgcggcgccatcttgctccgccgcttcgcggggcacttggggcagatagtagtggcggtaagctgagatatggccctgttcccggcttttgccggtgtcgccgagctcggggagccctcagccggcacaagcgagagctccaggaaagaattggactggcttagtaacccaagcttctctacggaagatgcactattactgcatcagcgcactacagaagttgcaaatctcatccctgaaaaatcaccactaataaggactacttcaagatcagagttgtcaggggaacgtgatacagatgagagtctgaaacagtcaagtaagaaaaggaaaaagaaaaagaagaagcatcaccactataagaagacaaaaaagaaaaacaaaggggactccagtagcagcgaatctgacctggacactaagcacatcaatgacaaagctgcaggaagttccagaaatcatgaaaaggaagcagcaggaaatctagataagaaaacatccaatcttaccagcaatcgctttgtttggcttgatgatatccagactttgacagcagaaaccttcagaatagacaagaaatcagaccccacaaactgggcctacaaatccctgtatcgaggggatatagcaaggtataaaaggaaaggggagtcctgtcttggcatagatgcaaagaaacagtgtataacttgggacagttcttcatcaaaagggaagcaattacagaggcgacctgagcgctacttcgcaaagaccaatgtgaagatgctgaagacagatgggattcctgtttgcaataaaagttctccgtctgactcaactgcttttatatcagttttccaaatggaaactgatgagccttctgacacaacggaggtaaatcctcttgggatttatgatccatcaactacagtgtggctacaaggaaaagggtgcaaggatgcagaccatgaggttgtaaatacgcagcaaacaactcaagagcctgggataaacattaactccattctaataacaaaagtggaagaacataacaagaaagtcagagaaaacccaagagatattaatgcttggatggagtttgtttcttttcaggatgaattaatgagaggacctaacctttatgccagccagggagagcaggaagtaagaagaaaatcactgaagttaatcttagaaaagaaactggctattttagagagggcaattgaaagcaatccaggtaatgtggaactgaaacttgccaggctgaagatttgcacagaattctgggaaccaccagcattgatcaaggaatggcagaagctaattttcttacatcccaataatccagagctctggaaaaagtatctcctcttctgtcaaagtcagttcactaccttttctgtttcaaaaatcaatagtctctatggaaaatgtttgactacattggcagctgtacgggatgggagcatggtatcacatcctctactgcctggtacagaagaagctatgctagctatatttattcagcagtgccactttctgagacaggctggccattctgagaaagcagtgtctttgtttcaggctctgattgacttcaccttctttaaacctgacagtgtaaaagatctgccaacaagaggacaggtggaattctttgaacccttttgggatagtggagaaccacgaatcggagaaaaaggagcaagaggctggaaagcatggatgcaccaacaagaaaagggtggctggattgctcttaagcctgatgatgatgatgaagaagagatagatgaggatcaagacataaaggataaaactctccccaagtggcatatttggttggatattgaatattctcgtgaagcaaggcaatggttaccttggaggccagacaaaaccaaaaaggaaactgaagaagattgtgaagatccagaaagacaggtattatttgatgatcttggaccatctttaatccagctttctaatccagatcttcagtgtcaactactgtactcatttttgcaattcctgggagttccatgtacaagtaaactctttccttccaacctctatattgccatggatgaaaataacatctttgacagcgtcctttctgatgaaaagccactgacttcttttgattttccactttctggattcaacagtattggtcatatggacacgatgctacgagggagacatcacataggccactataaagaaggagaggagttcatacagaatgtttttcatgttctattcctgctattttcaggaaaggaaaaatctaacctgaccatttgttggttacagtatgaaatatctaaggtagttcagtgtctccaaacaaaaaacaagaagaagctgaaagcccaagggaggaagagtaaaaagttggcaaagaatctccttaaagcacctgacaaccgaaaccacctttctctctggaaactgtatgcctacctagaatggctgctcggtaacatcgatgatgccaggaaggtatttgacacagctctttgcacggcagggacaggaggactgaagagtccccagatctgcagcctcagtctgctttatgctcagctggaagtggaactactagaaagtctggaaggagctgttatgtcacgtgctgttcatatattgaccaaattggctgaaagtggaccatatgtaccctatagcggacaagtgttatctgtgaatgtcttgaaagctcgtaaaacgtatgagcatgcactgcaagattatttaagtaaaacaccattttctgatcaggatcaggtcagtgatactaatcagctggtgaacttggtaggttgttatgcactgttccagtatttgactcttgggattgatgctgcagtgttaatatatgcacagacttcggaaaaacttggagctcctggcccacagaaatgtgaaaatactggagagaattttggcattcaaaattttcccactgctcttgaagctgtcacactgctgcatacaaatttactcagattccacatgaaaattagcgtttatcctttgaatcctctgcgagaggcactaacagaggctctgaaacggtatcctagcaaccagtctctttggaggtcatatatccacatcgaaaggaagtctcacagtgctagcaaagcacgaagattttttgatggtgtcacaaggtctactaattctttagagccgtggctgtttgcaatccaagcagagcagatgagaaaaaaactcattgagaatgtccagagatgttggtgaaatacattccactattcctgaaactgggttaacaaatcggattgtagctctatttgaacatgcagttcagagtgaaaatggtacccattgtccactgctgtggagaatgtatttgaactttctggcttcactaggaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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