2025-10-09 10:18:50, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XR_012673829 3902 bp RNA linear VRT 11-JUL-2025 DEFINITION PREDICTED: Calonectris borealis NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X3, misc_RNA. ACCESSION XR_012673829 VERSION XR_012673829.1 DBLINK BioProject: PRJNA1289127 KEYWORDS RefSeq. SOURCE Calonectris borealis (Cory's shearwater) ORGANISM Calonectris borealis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Calonectris. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_134316) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_964195595.1-RS_2025_07 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.4 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 07/10/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3902 /organism="Calonectris borealis" /mol_type="transcribed RNA" /db_xref="taxon:1323832" /chromosome="5" gene 1..3902 /gene="NRDE2" /note="NRDE-2, necessary for RNA interference, domain containing; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:142082797" misc_RNA 1..3902 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X3" /db_xref="GeneID:142082797" ORIGIN
cgctccgcccccgccatggagttgctgcgtaggcggtgctgccgctgggggccgagatcccggcagcggcggtctatgtcccacgcctctggaggtccgggagtgcggcagaggggctcgtctgtccggccagccccaccgctgagtgcgctctgtaagcgctgtttcagagggcggtgtgcccctcagcccgggctcctcccgcaggtgcggagcaccagcgtagaaccaagctacaggcacagtcaggggactaatgtttatgactccatttctcaagaattggactggcttagtaacccaagcttctctacggaagatgcactattactgcatcagcgcactacagaagttgcaaatctcatccctgaaaaatcaccactaataagcaggactacttcaagatcagagttgtcaggggaaagtgatacagatgagagtctgaaacagtcaagtaagaaaaggaaaaagaaaaagaaaaagcatcaccactataagaagacaaaaaagaaaaccaaaggggactctagtagcagcgaatcagacctggacactaagcacatcaaggacaaagccacaagaagtggcagaaatcatgaaaaggaagcagcagtgaatctagataagaaaacatcaaatcttaccagcagtcgctctgtttggcttgatgatatccaagctttcacagcagaaaccttcagaatagacaagaaaccagaccctgcaaactgggcctacaaatccctgtatcgaggggacatagcaagatataaaaggagaggagagtcatgtcttggcatagatgcaaagaaacagtgtataacttgggacagttctgcatcaaaaaggaagcaattacagaggcgacctgagcgctacttcacaaagaacaatatgaagatgctgaacatagatgggattcctgtttgcaataaaagttctccgtctgacccaactgcttttataccagttttccaaatggaaactgatgatctttctgacacagcggaggtaaatcctcttgggatttatgatccatcaactacagtgtggctacaaggaaaagggtgcaagagtgcagaccatgagcctgtaaatacgcagcaaacaattcaagagcctgggataaaaattaactccattctaatgacaaaagtggaagaacataacaagaaagtcagagaaaacccaagagatattaatgcttggatggaatttgtttcttttcaggatgaattaatgagaggacctagcccttatgccagtaagggagagcaggaagtaagaagaaaatcactgaagttaatcttagaaaagaaactggctattttagagagggcaattgaaagcaatccaagtaatgttgatctgaaacttgccaggctgaagctttgcacagagttctgggaaccaccagccttgatcaaagaatggcagaagctaattttcttacatcccaataatccagagctgtggaagaaatatctcctgttctgtcaaagtcagtttactaccttttctgtttcaaaaatcaatagtctctatggaaaatgtttgactacactggcagctgtacaggatggcagtatggtgtcacatcctctactgcctggcacagaagaagctatgttagctatatttattcagcagtgccactttctgaggcaggctggccattctgagaaagcagtgtctttgtttcaggctctgattgacttcaccttctttaaacctgacagtgtaaaagatctgccgacaaggggacaggtggaattctttgaacccttttgggatagtggagaaccacgtattggagaaaaaggagcaagaggctggaaagcatggatgcaccaacaagaaaagggtggctggattgctcttaagcctgatgatgatgatgatgaagagatagatgaggatcaagaaataaaggataaaactctccccaagtggcatatttggttggatattgaatattctcgtgaagcaaggcattggttaccttggaggccagacaaaaccaaaaaggaaactgaagaagattgtgaagatccagaaagacaggtattatttgatgatctcggaccatctttaatccagctttctaatccagatcttcaatgtcaactactgtactcgtttttgcaattcctgggagttccatgtacaagtaaactctttccttccaacctctatattgccatggatgaaaataacatctttgacagtgtgctttctgatgaaaagccactgacttctgttgattttccactttctggattcaacagtattggtcatatggacacaatgctacgagggagacatcacataggccactataaagaaggagaggagttcatacagaatgtttttcatgttctattcctgctattttcaggaaaggaaaaatctaacctgtccgtttgttggttacagtatgaagtatctaaggtagttcagtgtctccaagcaaaaaacaagaagaagctgaaagcacaagggaggaagagtaaaaagttggccaagaatctccttaaagcacctgacaaccgaaaccatctttctctctggaaactatatgcctacctagaatggctgcttggtaacattgatgatgccaggaaggtatttgacacagctctttgcatggcagggacaggaggattgaagagtccccagctctgcagcctcactctgctttatgctcagctggaagtggaactactagaaagtacagacggagctgttacgtcacgtgctgttcatatattgaccaaattggctgaaagtggaccgtatgtgccgtatagtggacaagtgttatctgtgaatgtcttaaaagctcgcaaaacatatgagcatgcactgcaagattatttaagtaaaacaccagtttctgatcaggatcaggtcagtgatgctaatcagctggttaacttggttggttgttacgcactgttccagtatttgactgttgggattgatgctgcagtattaatatatgcacagacttcggaaaaacttgaagctcctggtccacagacaggtgaaaatactggagagaattttggcattcaaaattttcccactgctcttgaagctgtcacagtgctgcatacaaatttactcagattccacatgaaaattagtgtttatcctttgagtcctctgcgagaggcactaactgaggctctgaaacggtatcctagcaaccagtctctttggaggtcatatatccacatccaaaggaagtctcacagtgctagcaaagcacgaagattttttgatggtgtcacaaggtctactaactctttagagccatggctgtttgcaatccaagcagagcagatgagaaaaaaactcactgagaatgtccagagggcaggtgttggtgaaatacattctactattcctgaaactgggttaacaaatcggattgtagctctatttgaacacgcagttcagagtgaaaatggtacccattgtccactgctgtggaggatgtatttgaactttctgaatcacacaatggctgaggttggaagggacctctggagatcatcttgtccaactccactgttcaagcagggccacctagagccagttgtccatgacaatgtctagatagcttttgaatatctccaaggatggagactccataactctctgggcaacccatgctagtgctcagtaaccctgacagaagaagagtgtttcctgatgttcagatggaacctcatgtgcttcagttgctgtctgttgcctctggtcctgtcactgggcaccactgaaaggagcctggctccctcttctttacatcctcgcttcaggcttcactaggaaaaaaagaaaaaagtaaaggattgttttataaagcccttcaaaactgtccttgggcaaag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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