2024-11-23 17:07:01, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XR_008802991 2779 bp RNA linear INV 18-MAY-2023 DEFINITION PREDICTED: Ostrea edulis uncharacterized LOC125683587 (LOC125683587), ncRNA. ACCESSION XR_008802991 VERSION XR_008802991.1 DBLINK BioProject: PRJNA970818 KEYWORDS RefSeq. SOURCE Ostrea edulis ORGANISM Ostrea edulis Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_079164) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_947568905.1-RS_2023_05 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 05/10/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2779 /organism="Ostrea edulis" /mol_type="transcribed RNA" /db_xref="taxon:37623" /chromosome="1" gene 1..2779 /gene="LOC125683587" /note="uncharacterized LOC125683587; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:125683587" ncRNA 1..2779 /ncRNA_class="lncRNA" /gene="LOC125683587" /product="uncharacterized LOC125683587" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:125683587" ORIGIN
cgtgaaggcagatattatttgaagcgtgaaggcagatattatttgaagcgtgacgaaaagaagcaccccattgagagatgcaagcggcactgacagacctaaccgttattcaacttattgactcatggatagagggtgtcctcaaaagatctgtgtggatcctggaacagagaatggaatcgttgcagcatttcattgaatcctgtttagaaggaaatggcaattcagttacttagggaaaatctggagcaaatcaaggtgcttcacaatacttctatgcagttcaacaaaatacagcgcctcatttacaaagactcgtatttaaacaatttccaagatattgatgaagattttacatgtgtggcaacatctattttgcatcagcatgatctgcctttgcctgacaccttgagagactggacctctactcatcatctctacatatatctgagggagtgcatgatgcatttgaagattctttaacatcataagatgttgtagaatatacatttgtttccatgactttgtacacttgcttttattgccagctgatttctgttccatagttttatgtatttaactaatcagatacattttcatgtattcacattttctgggggtgtttttttatccttgaaatattttaaatgtggagctttacagaatttcatttggtatgaatgctaaaggctattcatgaacagaattttttctttgaactctcccatcccactccaccatcccctaaaaaaacatccatgacttttgtccaagccatacctttgtactgttaaacttgctaaccacaggagtttacagaaatttttagctcttctgagccaaaggctcaaagagctaatgctatggccatttgtgcggtgtgcgtaaactttttagaaaaagggctataactcaagaaccccttggccaatttttttcaaatttgttacagggtatcattggcccaagggctttcatacatactaaatagagggatgtgaccatttaacaaggggagataatcaggaaaatacaaacaaaagtagtggttgctaaaaaatcttcttctcaagaaccacagggcagattatcaccaaacttacacataaggatgaggatatgttgtagattagaaattgttcaaggcattaccctggggcaaagggcatggtctcaaggtcacttcaaagttgacctaaatttaaattttttttaaattccttaaatcttagatgttttagtcattataaggactaggatcatcaaattttgacagttgatgcatcttaggaccttgtgtcaagttgtctcaaaagtaggtcacggtgacctactttttgaattttgcaggtatttattttaaaattaattttgatgcatatcttggacactttgaagcctatgatcatcaaaacttgtcagttggtggatcatgggaccttgaaatgcgtcaactgaaaaataggtcaccgtgacctactttctgaattttatggcttatcatttatagatatattttaagttgttatttcaaataccgagaggtttagaatcatcaaatcttgtaagttgatgcattttgaggccttgaagcatatttataaaaaaaaaaaaaaaaaagtaggtcacagtgacctacttttttaattttgcagatattcaaatttcacattttcaattttagatgcatattttgggcactgtaaaacctaggatcatcaaactttgtcagttgatgcgtcttcagtcttcggtttgtgtcgaccaaagagtaggtcaccgtgaccttcttttggtatttgacagctaaattactatatttcagacactatttgacctataatcatcaaactttgtcagttgatgcatcttgagtcttcggagtgtatcgaccaaaaagtaggtcactgtgacctacttttggcatttgacagttatatttatatatttcagtcactaattgacctacaatcatcaaactttgacagttgatgcatcttgagtcaacggagtgtgtcgaccaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttatatatttcagatactgtttgacctacagtcatcaaactttgtcagttgatgcgtcttgcatgttcaaagggtgttcaccaaaaagtaggtcaccatgacctacttttggaattggacggctatatttatataattcagatactatttgacctacagtcatcaaactttgtcagttgttgggtcttgcatgtttgaagggtgttgacgaaaaagtaggtcaccttgacctacttttggaatttgacggctatatttatatatttcagatactatttgacctacagtcatcaaactttgtcagttgatgggtcttgcatgttcggagttcgctgaccaaaaggtaggtcaacatgacctacgattggaatttgacagctatatttcaatattcagatactaattggcttaaaatcatcaaactttgtcagttgatatttcttgggttctcaaaatgtgtaaaccaacaagtaggtcacattgacctactttttttgaattcttaggatttaactaaagatttagaatactaataggctaagaatagaaatggtggggttgtacaatttatcagaagagcgattctaggcccttgggcctcttgtttttatttgctatgcatttatatattcaaaatgtttagcaccttctgatatgtattattaatgtcaaatatgtatgattgtgtaataaattatatacatgtattta
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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